Rv0001 - c.1254T>G


Drug resistance types
1 Sensitive 4 RR-TB 23 HR-TB 5 MDR-TB 0 Pre-XDR-TB 3 XDR-TB 13 Other
lineage Counts
lineage Count
lineage4.9 12
M.canetti;lineage4.9;lineage9 1
La1.7;lineage4.9 2
lineage4 2
2
La1.2 1
lineage4.3.4.2.1 2
lineage3 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage1 1
lineage4.9;lineage7 1
La3;lineage4.9 4
lineage2.2.1 2
lineage4.9;lineage9 1
lineage3.1;lineage9 1
La3;lineage2.1;lineage4.9 1
lineage2.2 1
lineage1.2.1.1 1
M.canetti;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.6.2.2 2
lineage4.1.1.3 1
lineage2.1;lineage4.9 1
M.canetti;lineage2.2 2
La1.7.X-unk4;lineage4.9 1
M.canetti;lineage2.2.2;lineage6.2 2
La1.7.1;La1.7.X-unk4;lineage7 1
spoligotype Counts
spoligotype Count
None 49
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR502511 HR-TB lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR11252736 Other lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR212001 HR-TB None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR23961549 Other La1.2 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR702405 HR-TB lineage4.9 None
ERR212033 Other lineage4.9 None
ERR990545 RR-TB lineage3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR15014655 Other M.canetti;lineage1 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR176751 HR-TB lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR1180137 RR-TB lineage2.2.1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR502510 HR-TB lineage4.9 None
ERR9786843 Other None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR4814734 Other lineage1.2.1.1 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR124636 HR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR3273109 HR-TB lineage4 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR7821163 Other lineage2.2.1 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR779852 HR-TB lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1169306 Other La3;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR161149 Sensitive lineage4.3.4.2.1 mw
ERR1063862 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None