Rv0001 - c.1254T>G
Drug resistance types
8 Sensitive
1 RR-TB
16 HR-TB
5 MDR-TB
0 Pre-XDR-TB
3 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.9 | 14 |
| La3;lineage4.9 | 4 |
| lineage4.6.2.2 | 2 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.3.4.2.1 | 2 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage2.2.1 | 2 |
| M.canetti;lineage2.2 | 2 |
| lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2 | 1 |
| lineage1.2.1.1 | 1 |
| M.canetti;lineage4.9 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4 | 2 |
| lineage3 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.9;lineage9 | 1 |
| La1.2 | 1 |
| La1.7;lineage4.9 | 2 |
| 2 | |
| lineage3.1;lineage9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 51 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR13285068 | Sensitive | lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR161149 | Sensitive | lineage4.3.4.2.1 | mw | SRR12416842 | HR-TB | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR176751 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR13265833 | Other | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR3273109 | HR-TB | lineage4 | None | ERR990545 | Other | lineage3 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR23961549 | Other | La1.2 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR9786843 | Other | None | SRR28351339 | MDR-TB | lineage4 | None | ERR212001 | HR-TB | None | ERR212033 | Other | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR11252736 | Other | lineage4.9 | None |
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