Rv1484 - c.594G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
20 Sensitive
2 RR-TB
25 HR-TB
6 MDR-TB
0 Pre-XDR-TB
3 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage4.9 | 6 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage1.1.2 | 1 |
| La1;lineage4.9 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.9 | 27 |
| 8 | |
| lineage5.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage4.1.2 | 2 |
| lineage1.1.1 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.1 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage4 | 4 |
| lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 2 |
| M.canetti;lineage2.2 | 2 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.7 | 1 |
| M.canetti;lineage4.9 | 2 |
| La1.7;lineage4.2 | 1 |
| La1.2 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.1.2.1 | 2 |
| lineage3.1;lineage9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 86 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR12006550 | Sensitive | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR23961542 | Other | La1;lineage4.9 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR9786843 | Other | None | ERR2514692 | Other | None | SRR21690362 | Other | lineage1.1.1 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR1063896 | Sensitive | None | SRR6045526 | Other | lineage4.9 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | ERR9786526 | Other | lineage4.1 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR9786525 | Other | lineage4 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4816478 | HR-TB | lineage4 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR4817060 | Other | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR4819241 | Other | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR4797201 | Other | None | SRR29097058 | Other | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | SRR6789626 | Other | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR9786507 | RR-TB | lineage4.7 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR23961549 | Other | La1.2 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR212001 | HR-TB | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR2513470 | Other | lineage4.2.2.2 | None |
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