lineage | Count |
---|---|
lineage4 | 43 |
47 | |
lineage4.1.2.1 | 2 |
lineage4;lineage3.1 | 1 |
lineage1.2.2.2 | 1 |
lineage1.1.2 | 1 |
lineage2.2.1 | 4 |
lineage4.8;lineage4.1 | 2 |
lineage2.2 | 5 |
lineage5.2 | 2 |
lineage4.7 | 1 |
lineage1.1.3.1 | 1 |
lineage4.6.2.2 | 3 |
La3 | 1 |
lineage1.2.1.2 | 1 |
La1.8.1 | 1 |
lineage4.9 | 4 |
lineage4;lineage2.2 | 1 |
lineage9;lineage3.1 | 1 |
lineage4.9;La1 | 1 |
lineage4.2;La1.7 | 1 |
La1.2 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage4.3.4.2.1 | 1 |
lineage4.3 | 1 |
lineage4.2.2.2 | 1 |
lineage4.1.1.2 | 1 |
lineage4.2.1 | 1 |
lineage4.1 | 1 |
lineage4.3.2.1 | 1 |
lineage4.1.2 | 2 |
spoligotype | Count |
---|---|
None | 135 |
ID | Drug resistance | Lineage | Country iso2 | ERR133825 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283014 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283047 | HR-TB | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797036 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR4797264 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4024991 | Other | None | ERR405209 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR6358979 | Other | None | ERR6866022 | Other | None | ERR702404 | HR-TB | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786507 | Sensitive | lineage4.7 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9786843 | Other | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1167384 | Other | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1169306 | Other | None | SRR1181289 | Other | lineage2.2.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR1183049 | Other | lineage2.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR8692790 | RR-TB | lineage4 | None | SRR23961542 | Other | lineage4.9;La1 | None | SRR8692887 | Other | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR3675510 | Other | None | SRR23961549 | Other | La1.2 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR2513470 | Other | lineage4.2.2.2 | None | SRR3675574 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2027263 | Other | lineage4 | None | ERR212001 | HR-TB | None | ERR212033 | HR-TB | None | ERR4817060 | RR-TB | None | ERR4818929 | HR-TB | None | SRR5341300 | Other | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | ERR4819623 | Sensitive | lineage4.9 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341456 | Other | None | ERR2514692 | Other | None | SRR5341299 | Sensitive | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341469 | Other | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | ERR2514821 | Other | lineage2.2.1 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045503 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6044790 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6044838 | Other | lineage4.9 | None | SRR6046225 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045327 | HR-TB | None | SRR6045399 | Other | None | ERR502510 | Sensitive | lineage4 | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6511621 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR8217918 | HR-TB | None | SRR6789626 | Other | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR1063896 | Sensitive | None | ERR323107 | Other | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None |
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