TB-Profiler
Home
Upload
SRA data
Rv0005
- c.1026C>T
Drug resistance types
29 Sensitive
1 RR-TB
31 HR-TB
11 MDR-TB
2 Pre-XDR-TB
3 XDR-TB
77 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
45
11
lineage2.1;lineage4.9
9
lineage4.1.2.1
8
La3;lineage4.9
8
lineage2.1;lineage4.9;lineage6.3
5
lineage2.2.1
5
lineage3
4
lineage4.9;lineage9
3
lineage4.9;lineage6.3
3
Showing 1 to 10 of 52 entries
Previous
1
2
3
4
5
6
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
154
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR067699
Sensitive
La1;lineage2;lineage4.9
None
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR1063846
HR-TB
lineage4.9
None
ERR108471
HR-TB
lineage4.9
None
ERR11252736
Other
lineage4.9
None
ERR13264981
Sensitive
La1.7;lineage4.9
None
ERR13285068
Sensitive
lineage4.9
None
ERR133825
HR-TB
La1;lineage4.9
None
ERR1873492
HR-TB
M.canetti;lineage2.2.2;lineage6.2
None
ERR2510568
Pre-XDR-TB
lineage3
pk
Showing 1 to 10 of 154 entries
Previous
1
2
3
4
5
…
16
Next