Rv0005 - c.1026C>T


Drug resistance types
32 Sensitive 0 RR-TB 68 HR-TB 5 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 51 Other
lineage Counts
lineage Count
64
lineage4;lineage2.2 1
lineage4.9 16
lineage4.9;lineage4.6.3 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage2.2.1 5
lineage4 27
lineage1.2.1.1 1
lineage2.1 1
lineage2.2 5
La1.8.1 3
lineage3.1.3 1
lineage4.1.1.2 1
lineage3 4
lineage4.7 2
lineage5.2 1
lineage4.1.2.1 7
lineage4.2.1 2
La2 1
lineage4.1.2 1
lineage4;lineage3.1 1
lineage4.1.3 2
lineage3.1.2 1
lineage4.3.4.2.1 1
lineage1.1.3.1 1
lineage1.1.2 1
lineage4.3.2 1
lineage4.8 1
lineage4.6.2.2 1
lineage6 1
lineage3.1.2.2;lineage3.1.2.1 1
lineage1.2.1.2 1
lineage4.5 1
lineage7;lineage2.2.1.2 1
lineage9;lineage3.1 1
spoligotype Counts
spoligotype Count
None 161
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR8692905 HR-TB None
SRR8692863 Other lineage4;lineage2.2 None
SRR8692825 Other lineage4.9 None
SRR8692888 Other lineage4.9 None
SRR8692887 Other None
ERR4815604 HR-TB None
SRR26159047 Other lineage4.9;lineage4.6.3 None
SRR3675221 HR-TB None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR3675465 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
SRR3675312 HR-TB lineage4 None
SRR3675236 HR-TB None
ERR4814734 Other lineage1.2.1.1 None
SRR3675311 Other None
ERR176740 HR-TB None
SRR3675510 Other None
ERR4816999 Other None
ERR4816466 HR-TB None
SRR3675572 Other None
ERR2229163 Sensitive lineage4 None
SRR5341422 HR-TB lineage2.1 None
ERR4816656 HR-TB None
ERR4816585 Other lineage2.2 None
ERR4818021 Other La1.8.1 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4818110 Sensitive lineage4.9 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4818607 Sensitive lineage4.9 None
ERR4818929 HR-TB None
ERR4818252 Other lineage4.1.1.2 None
SRR5341373 HR-TB lineage4 None
ERR4818615 Other None
SRR5341332 Pre-XDR-TB lineage3 None
ERR4819781 Other lineage2.2.1 None
ERR4819932 Other lineage4.7 None
SRR5341400 HR-TB lineage4 None
SRR5341432 HR-TB lineage4 None
SRR5341293 HR-TB lineage4 None
SRR5341313 HR-TB None
SRR5341315 Sensitive None
ERR2706950 MDR-TB lineage5.2 cd
SRR5341333 HR-TB None
ERR4820854 Other lineage4.1.2.1 None
SRR5341330 HR-TB None
SRR5341470 HR-TB None
SRR6044835 Sensitive lineage4 None
SRR6045892 Sensitive None
ERR4821872 Sensitive lineage4.9 None
ERR2693227 Other lineage4.9 None
SRR6044855 Other lineage4.9 None
SRR6046305 Other lineage4.9 None
SRR6045010 Other lineage4 None
SRR6044875 HR-TB lineage4.9 None
SRR6046066 HR-TB None
SRR6046253 HR-TB lineage4.9 None
SRR6046460 HR-TB None
SRR6046362 HR-TB None
SRR6046540 HR-TB None
SRR6511621 HR-TB None
ERR4831546 HR-TB lineage2.2 None
ERR4831117 HR-TB None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR2510568 Pre-XDR-TB lineage3 pk
SRR6831881 Sensitive lineage4.1.2.1 None
SRR6785262 Sensitive lineage4.2.1 None
ERR502532 HR-TB None
ERR502524 HR-TB La2 None
ERR502510 Sensitive lineage4 None
SRR7496523 Other lineage4.7 None
SRR7496509 Other None
SRR7496517 Other None
ERR323043 HR-TB None
SRR9970978 Sensitive lineage4.1.2 None
ERR323039 HR-TB None
ERR323108 HR-TB lineage4 None
ERR323053 HR-TB None
ERR323115 Sensitive lineage4 None
ERR067699 HR-TB lineage4 None
ERR323107 Other lineage4 None
ERR1034652 Other None
ERR108471 HR-TB lineage4 None
ERR1035157 Other lineage4.9 None
ERR133825 Sensitive lineage4 None
ERR3283031 HR-TB None
ERR3273109 MDR-TB lineage4 None
ERR3283014 HR-TB None
ERR3283028 Other None
ERR3283027 HR-TB None
ERR3283036 HR-TB None
ERR3283051 Other lineage4.9 None
ERR3283057 HR-TB lineage4 None
ERR3283047 HR-TB None
ERR5336148 Other None
ERR3797067 Other La1.8.1 None
ERR3797048 HR-TB None
ERR3797058 Other lineage4.9 None
ERR3797079 Sensitive lineage4 None
ERR3797065 MDR-TB lineage4 None
ERR3797069 Other None
ERR3797063 HR-TB None
ERR3797064 Sensitive None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR3804155 Other lineage4.1.2.1 None
ERR3804169 HR-TB lineage4.1.3 None
ERR3797087 Sensitive lineage4 None
ERR405209 Sensitive lineage4 None
ERR4188247 HR-TB None
ERR4797184 Sensitive lineage4 None
ERR4796929 Sensitive lineage4 None
ERR4797474 Other None
ERR4798504 Other lineage3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR6358979 Other None
ERR4800341 Other lineage3 None
ERR4810624 HR-TB lineage2.2 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4811493 HR-TB None
ERR6866547 Sensitive lineage4 None
ERR6866410 Sensitive None
ERR751326 Sensitive lineage4 None
ERR736848 HR-TB None
ERR736872 Sensitive lineage4 None
ERR702406 HR-TB None
ERR736856 HR-TB lineage4 None
ERR736865 HR-TB None
ERR736867 HR-TB None
ERR9285862 Sensitive lineage4.3.4.2.1 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9117721 HR-TB lineage1.1.2 None
ERR7821163 Other lineage2.2.1 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR9117709 HR-TB None
ERR9117805 Other lineage4.3.2 None
ERR9786604 Other None
ERR9786421 Other lineage4.1.2.1 None
ERR9786569 Other lineage4.8 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
SRR1172146 Sensitive lineage4.9 None
ERR9787165 Other lineage6 None
ERR9787197 Other None
ERR987722 HR-TB None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
SRR10808805 Sensitive None
SRR1174897 HR-TB None
SRR1172310 HR-TB None
SRR1180355 Sensitive lineage4.9 None
SRR12006550 Other lineage1.2.1.2 None
SRR12416824 HR-TB None
SRR14801749 Sensitive None
SRR14802079 MDR-TB lineage4.2.1 None
SRR18213713 HR-TB lineage4.5 None
SRR1791747 Other La1.8.1 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR19295647 Sensitive lineage4.9 None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
SRR19303884 HR-TB None