Rv0407 - c.360C>T
Drug resistance types
6 Sensitive
5 RR-TB
8 HR-TB
48 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.4.2 | 58 |
| lineage4.9 | 5 |
| La3;lineage4.3.4 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La1.7;lineage4.9 | 2 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| lineage3.1;lineage9 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| 1 | |
| La1.7.1;La1.7.X-unk4 | 1 |
| La3;lineage4.9 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 77 |
Geographic prevalence
Country level data for this variant is available for 43 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2707021 | MDR-TB | lineage4.3.4.2 | cd | SRR26112470 | Sensitive | lineage4.3.4.2 | None | ERR2516329 | MDR-TB | lineage4.3.4.2 | be | ERR161037 | HR-TB | lineage4.9 | None | ERR2707059 | MDR-TB | lineage4.3.4.2 | cd | ERR2706989 | MDR-TB | lineage4.3.4.2 | cd | ERR7361910 | RR-TB | lineage4.3.4.2 | None | SRR6896325 | RR-TB | lineage4.3.4.2 | None | ERR2707107 | MDR-TB | lineage4.3.4.2 | cd | ERR275183 | MDR-TB | lineage4.3.4.2 | pt | ERR2706951 | MDR-TB | lineage4.3.4.2 | cd | ERR9119669 | MDR-TB | lineage4.9 | None | ERR4423713 | MDR-TB | lineage4.3.4.2 | None | ERR1035193 | MDR-TB | lineage4.3.4.2 | pt | SRR6045526 | Other | lineage4.9 | None | ERR2707079 | MDR-TB | lineage4.3.4.2 | cd | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR2707004 | MDR-TB | lineage4.3.4.2 | cd | ERR4423716 | MDR-TB | lineage4.3.4.2 | None | ERR10969128 | RR-TB | lineage4.3.4.2 | None | ERR2707179 | MDR-TB | lineage4.3.4.2 | cd | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR2707204 | MDR-TB | lineage4.3.4.2 | cd | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR1034818 | HR-TB | lineage4.3.4.2 | pt | ERR2706949 | MDR-TB | lineage4.3.4.2 | cd | ERR2707013 | MDR-TB | lineage4.3.4.2 | cd | SRR12416840 | MDR-TB | lineage4.9 | None | ERR11049375 | Sensitive | lineage4.3.4.2 | None | ERR2707196 | MDR-TB | lineage4.3.4.2 | cd | ERR2707231 | MDR-TB | lineage4.3.4.2 | cd | ERR2707171 | MDR-TB | lineage4.3.4.2 | cd | ERR2706984 | MDR-TB | lineage4.3.4.2 | cd | ERR2707081 | MDR-TB | lineage4.3.4.2 | cd | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR2706985 | MDR-TB | lineage4.3.4.2 | cd | ERR2707209 | MDR-TB | lineage4.3.4.2 | cd | SRR13180325 | HR-TB | lineage4.3.4.2 | None | ERR2706986 | MDR-TB | lineage4.3.4.2 | cd | ERR10969142 | Sensitive | lineage4.3.4.2 | None | ERR2707152 | MDR-TB | lineage4.3.4.2 | cd | ERR2707136 | MDR-TB | lineage4.3.4.2 | cd | ERR9907698 | MDR-TB | lineage4.3.4.2 | None | ERR2707141 | MDR-TB | lineage4.3.4.2 | cd | SRR3675248 | Other | lineage4.9 | None | ERR2707192 | MDR-TB | lineage4.3.4.2 | cd | ERR2706957 | MDR-TB | lineage4.3.4.2 | cd | ERR5311097 | Other | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR2707078 | MDR-TB | lineage4.3.4.2 | cd | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR2514692 | Other | None | ERR11591425 | RR-TB | lineage4.3.4.2 | None | ERR10969223 | Sensitive | lineage4.3.4.2 | None | SRR7517735 | MDR-TB | lineage4.3.4.2 | ch | ERR2707162 | MDR-TB | lineage4.3.4.2 | cd | ERR2707018 | MDR-TB | lineage4.3.4.2 | cd | ERR2706952 | MDR-TB | lineage4.3.4.2 | cd | ERR2706995 | MDR-TB | lineage4.3.4.2 | cd | ERR2707103 | MDR-TB | lineage4.3.4.2 | cd | ERR2707225 | MDR-TB | lineage4.3.4.2 | cd | ERR12311962 | Sensitive | lineage4.3.4.2 | None | ERR2706992 | MDR-TB | lineage4.3.4.2 | cd | ERR2707172 | MDR-TB | lineage4.3.4.2 | cd | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR2515395 | RR-TB | lineage4.3.4.2 | za | ERR2707181 | MDR-TB | lineage4.3.4.2 | cd | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR2707061 | MDR-TB | lineage4.3.4.2 | cd | ERR2677470 | MDR-TB | lineage4.3.4.2 | de | ERR8975135 | Sensitive | lineage4.3.4.2 | None | ERR2707210 | MDR-TB | lineage4.3.4.2 | cd | ERR7764329 | HR-TB | lineage4.3.4.2 | None |
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