Rv0407 - c.360C>T

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
8 Sensitive 5 RR-TB 8 HR-TB 84 MDR-TB 0 Pre-XDR-TB 1 XDR-TB 10 Other
lineage Counts
lineage Count
lineage4.3.4.2 95
lineage4.9 6
lineage4.3.4 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.1.2 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;lineage4.9 1
lineage3.1;lineage9 1
La1.7;lineage4.9 2
lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.2;lineage4.6.3;lineage4.9.1 2
1
La1.7.1;La1.7.X-unk4 1
La1.7.1;lineage4.9 1
lineage4.2;lineage4.6.3;lineage4.9 1
spoligotype Counts
spoligotype Count
None 116
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4423713 MDR-TB lineage4.3.4.2 None
SRR29231850 MDR-TB lineage4.3.4.2 None
ERR212123 Other lineage4.9 None
SRR29231792 MDR-TB lineage4.3.4.2 None
ERR161039 Sensitive lineage4.3.4 None
SRR29230992 MDR-TB lineage4.3.4.2 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
SRR29231763 MDR-TB lineage4.3.4.2 None
SRR29341462 MDR-TB lineage4.1.2 None
SRR29231767 MDR-TB lineage4.3.4.2 None
SRR29230790 MDR-TB lineage4.3.4.2 None
ERR11049375 Sensitive lineage4.3.4.2 None
ERR4423716 MDR-TB lineage4.3.4.2 None
ERR2707179 MDR-TB lineage4.3.4.2 cd
ERR2707021 MDR-TB lineage4.3.4.2 cd
ERR2707018 MDR-TB lineage4.3.4.2 cd
ERR2707061 MDR-TB lineage4.3.4.2 cd
ERR2706949 MDR-TB lineage4.3.4.2 cd
ERR2707210 MDR-TB lineage4.3.4.2 cd
ERR10969142 Sensitive lineage4.3.4.2 None
ERR8975135 Sensitive lineage4.3.4.2 None
ERR2677470 MDR-TB lineage4.3.4.2 de
ERR2515395 RR-TB lineage4.3.4.2 za
SRR29230797 MDR-TB lineage4.3.4.2 None
ERR1034818 HR-TB lineage4.3.4.2 pt
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR181744 HR-TB La3;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR12311962 Sensitive lineage4.3.4.2 None
ERR11591425 RR-TB lineage4.3.4.2 None
ERR7361910 RR-TB lineage4.3.4.2 None
ERR2516329 MDR-TB lineage4.3.4.2 be
ERR10969223 Sensitive lineage4.3.4.2 None
SRR26112470 Sensitive lineage4.3.4.2 None
SRR29231779 MDR-TB lineage4.3.4.2 None
SRR29231800 MDR-TB lineage4.3.4.2 None
SRR29231808 MDR-TB lineage4.3.4.2 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR29231681 MDR-TB lineage4.3.4.2 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR29231680 MDR-TB lineage4.3.4.2 None
SRR6045526 Other lineage4.9 None
SRR29231801 MDR-TB lineage4.3.4.2 None
SRR29231852 MDR-TB lineage4.3.4.2 None
SRR29231299 MDR-TB lineage4.3.4.2 None
ERR161037 Other lineage4.9 None
SRR29231305 MDR-TB lineage4.3.4.2 None
SRR29231311 MDR-TB lineage4.3.4.2 None
SRR29231662 MDR-TB lineage4.3.4.2 None
SRR29231768 MDR-TB lineage4.3.4.2 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR29230773 MDR-TB lineage4.3.4.2 None
SRR29231825 MDR-TB lineage4.3.4.2 None
SRR29230985 MDR-TB lineage4.3.4.2 None
SRR29231757 MDR-TB lineage4.3.4.2 None
SRR29230772 MDR-TB lineage4.3.4.2 None
SRR29230995 MDR-TB lineage4.3.4.2 None
SRR29230990 MDR-TB lineage4.3.4.2 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR2514692 Other None
ERR2706989 MDR-TB lineage4.3.4.2 cd
ERR2706952 MDR-TB lineage4.3.4.2 cd
ERR2707181 MDR-TB lineage4.3.4.2 cd
ERR2707209 MDR-TB lineage4.3.4.2 cd
ERR2707204 MDR-TB lineage4.3.4.2 cd
ERR2706985 MDR-TB lineage4.3.4.2 cd
ERR2707103 MDR-TB lineage4.3.4.2 cd
ERR2707192 MDR-TB lineage4.3.4.2 cd
ERR2706957 MDR-TB lineage4.3.4.2 cd
ERR2707141 MDR-TB lineage4.3.4.2 cd
ERR2707004 MDR-TB lineage4.3.4.2 cd
ERR2707196 MDR-TB lineage4.3.4.2 cd
ERR1035193 MDR-TB lineage4.3.4.2 pt
SRR13180325 HR-TB lineage4.3.4.2 None
SRR6896325 RR-TB lineage4.3.4.2 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR29231864 MDR-TB lineage4.3.4.2 None
SRR29231696 MDR-TB lineage4.3.4.2 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR29231744 MDR-TB lineage4.3.4.2 None
SRR3675248 Other lineage4.9 None
ERR7764329 HR-TB lineage4.3.4.2 None
SRR29231764 MDR-TB lineage4.3.4.2 None
SRR29231788 MDR-TB lineage4.3.4.2 None
SRR29231861 MDR-TB lineage4.3.4.2 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR29231689 MDR-TB lineage4.3.4.2 None
ERR11082542 MDR-TB lineage4.3.4.2 None
SRR29231809 MDR-TB lineage4.3.4.2 None
ERR275183 MDR-TB lineage4.3.4.2 pt
SRR29231009 MDR-TB lineage4.3.4.2 None
ERR2706986 MDR-TB lineage4.3.4.2 cd
ERR2706995 MDR-TB lineage4.3.4.2 cd
ERR2707107 MDR-TB lineage4.3.4.2 cd
ERR2707059 MDR-TB lineage4.3.4.2 cd
ERR2706984 MDR-TB lineage4.3.4.2 cd
ERR2707152 MDR-TB lineage4.3.4.2 cd
ERR2707172 MDR-TB lineage4.3.4.2 cd
ERR2707225 MDR-TB lineage4.3.4.2 cd
ERR2707171 MDR-TB lineage4.3.4.2 cd
ERR2706992 MDR-TB lineage4.3.4.2 cd
ERR2707013 MDR-TB lineage4.3.4.2 cd
ERR2707079 MDR-TB lineage4.3.4.2 cd
ERR2706951 MDR-TB lineage4.3.4.2 cd
ERR2707078 MDR-TB lineage4.3.4.2 cd
ERR2707081 MDR-TB lineage4.3.4.2 cd
ERR2707136 MDR-TB lineage4.3.4.2 cd
ERR2707162 MDR-TB lineage4.3.4.2 cd
ERR2707231 MDR-TB lineage4.3.4.2 cd
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR7517735 MDR-TB lineage4.3.4.2 ch
SRR29231766 MDR-TB lineage4.3.4.2 None
ERR9907698 MDR-TB lineage4.3.4.2 None
ERR10969128 RR-TB lineage4.3.4.2 None
ERR9119669 HR-TB lineage4.9 None