Rv0006 - c.2085T>C


Drug resistance types
27 Sensitive 8 RR-TB 100 HR-TB 42 MDR-TB 3 Pre-XDR-TB 2 XDR-TB 108 Other
lineage Counts
lineage Count
La3;M.canetti;lineage4.9 1
lineage4.9 70
La3;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9 12
La1.7;lineage4.9 5
13
La3;lineage2 1
lineage2.1;lineage4.9 14
M.canetti;lineage4.9;lineage9 1
La3;lineage2.1;lineage4.9 2
lineage4.3.4.2.1 1
lineage2.1;lineage4.9;lineage6.3 9
La1.7;lineage4.9;lineage7 2
M.canetti;lineage2.1;lineage4.9 24
lineage2.1;lineage4.3.2 1
lineage2.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
lineage1;lineage4.9 1
lineage3.1.2.2 1
M.canetti;lineage2.2.2;lineage6.2 2
M.canetti;lineage1 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.1.2.1 3
lineage2.2.1 6
lineage4.9;lineage6.3 8
M.canetti;lineage2.1;lineage4.1.2.1 1
La1.7.1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage4.9 3
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.9;lineage7 1
lineage1.1.3.2 1
lineage2.1;lineage2.2;lineage6.3 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
M.canetti;lineage2.1;lineage3 1
La1.7;M.canetti;lineage4.9 4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
La3;lineage4.9 5
lineage2.1 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;M.canetti;lineage4.8;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.2.BCG;La1.8.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.5 3
lineage2.2 2
lineage3.1.2.1;lineage3.1.2.2 1
La3;M.canetti;lineage2.2.1 1
lineage4.1.1.3 2
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 4
La2;lineage4.9 1
La1.7 1
lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 1
lineage2.2.1;lineage3 1
lineage2.2.1;lineage6.3 1
La3;lineage4.3.4 1
lineage4.9;lineage9 3
lineage4 2
lineage3 2
La3 2
lineage4.8.1 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage5.1.4 1
lineage4.6.3;lineage4.9 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage1.2.1.2 1
La1.7.1 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage3.1;lineage9 1
lineage4.6.1.1 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.3.4 1
lineage6.3.1 1
M.canetti;lineage2.1;lineage4 1
La3;M.canetti;lineage2.1;lineage3.1 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.7;lineage3.1;lineage4 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage4.1.1.1 1
La2;lineage4.9;lineage9 1
M.canetti;lineage2.1;lineage6.3 1
La1.7;lineage4.2 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.2;lineage4 1
lineage4.3.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 290
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR29097026 Other lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
SRR18213713 HR-TB None
SRR20969677 HR-TB La3;lineage2 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR3675501 Other La1.7;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323036 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675267 Other La1.7;lineage4.9 None
SRR6046066 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR15014655 Other M.canetti;lineage1 None
ERR1063846 HR-TB lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4816466 HR-TB lineage4.9 None
ERR971389 Sensitive lineage4.9 None
SRR28119777 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR473332 Other lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR28868888 Other lineage1.1.3.2 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR212125 HR-TB lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR9786843 Other None
SRR3675221 Other lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR11252612 Other La3;lineage4.9 None
SRR25827682 Other None
ERR9787197 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR181824 HR-TB lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
ERR176778 HR-TB lineage4.9 None
SRR1181289 Other lineage2.2.1 None
ERR926165 Sensitive lineage4.9 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR3675275 Other lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR4810624 MDR-TB lineage2.2 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR4817896 HR-TB lineage2.2.1 None
SRR1183049 RR-TB lineage2.2 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR323039 HR-TB La2;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR926162 Sensitive lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4830353 Other La1.7 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR926160 Sensitive lineage4.9 None
ERR1035157 Other lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR181887 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR3675461 RR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
SRR29096150 Other lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR926163 Other lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR3283044 Other lineage4 None
ERR4800341 Other lineage3 None
ERR4817731 HR-TB lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR926154 Sensitive lineage4.9 None
SRR1172728 RR-TB La3 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR176643 Other La3;lineage4.9 None
ERR926164 Other lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR3675488 Other La1.7;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
ERR4811493 HR-TB lineage4.9 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR212001 HR-TB None
ERR234659 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR926156 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR7240492 HR-TB La1.7.1 None
ERR9786604 Other None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR1640750 Other None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR4819241 Other lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR25827418 XDR-TB lineage3.1;lineage9 None
ERR4818929 HR-TB lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR9787139 Other lineage6.3.1 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
SRR3675522 Other lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR6044780 Sensitive lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045526 Other lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR5341330 Other lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR26159043 Other lineage4.9 None
SRR6789626 Other None
ERR926158 Sensitive lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR161037 Other lineage4.9 None
ERR4811501 Sensitive lineage4.5 cn
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR926161 Sensitive lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR3675236 Other None
ERR176793 Other lineage4.1.1.1 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR176766 HR-TB lineage2.1;lineage4.9 None
SRR1172817 Other La3 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR7496509 Other None
ERR3797046 HR-TB lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR29050859 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR23961559 Other La1.7;lineage4.2 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR1184294 Other lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR2514692 Other None
ERR987722 MDR-TB None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR28119805 Other lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3283055 HR-TB lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR29096203 Sensitive lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR926155 Sensitive lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR176651 Other lineage4.9 None
ERR752229 Other lineage4.5 None