lineage | Count |
---|---|
lineage4.1.1 | 1 |
lineage4.9 | 6 |
lineage4 | 44 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage3 | 2 |
lineage2.2.1 | 2 |
lineage4.3.2.1 | 2 |
lineage2.1 | 1 |
lineage4.1.2.1 | 5 |
8 | |
lineage4.1.1.3 | 8 |
lineage4.2.1 | 1 |
lineage1.1.2 | 1 |
lineage4.3.3 | 1 |
La1.3 | 1 |
lineage9;lineage3.1 | 1 |
spoligotype | Count |
---|---|
None | 85 |
ID | Drug resistance | Lineage | Country iso2 | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR5341432 | HR-TB | lineage4 | None | ERR4817998 | Other | lineage3 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341408 | Sensitive | lineage3 | None | SRR6045503 | HR-TB | None | SRR5338517 | MDR-TB | lineage4.1.1.3 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341293 | HR-TB | lineage4 | None | SRR6045892 | Sensitive | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR3256238 | MDR-TB | lineage4.1.1.3 | ph | ERR4822341 | MDR-TB | lineage4.1.1.3 | jp | ERR3256127 | MDR-TB | lineage4.1.1.3 | ph | SRR6045371 | Sensitive | lineage4.2.1 | None | ERR3256128 | MDR-TB | lineage4.1.1.3 | ph | SRR6046802 | Other | lineage4 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR349298 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | DRR130056 | MDR-TB | lineage4.1.1.3 | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363426 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769552 | Other | La1.3 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR4798431 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866410 | Sensitive | None | SRR22251101 | MDR-TB | lineage4.1.1.3 | None | ERR9119669 | HR-TB | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR14801749 | Sensitive | None | SRR16157123 | Other | lineage4.9 | None | SRR26112759 | Other | lineage4.1.1.3 | None | SRR10808668 | Sensitive | lineage2.2.1 | None |
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