lineage | Count |
---|---|
lineage4.4 | 4 |
44 | |
lineage4.9 | 15 |
lineage4 | 14 |
lineage4.3 | 1 |
lineage2.2.1 | 3 |
La2 | 1 |
lineage2.2 | 3 |
lineage4;lineage3.1 | 1 |
lineage3.1.2 | 1 |
lineage4.5 | 1 |
lineage4.1.2 | 2 |
lineage4.8;lineage4.1 | 1 |
lineage4.1.2.1 | 1 |
La3 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage9;lineage3.1 | 1 |
spoligotype | Count |
---|---|
None | 96 |
ID | Drug resistance | Lineage | Country iso2 | ERR4814565 | Sensitive | lineage4.4 | None | SRR3675222 | Other | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675501 | HR-TB | None | SRR3675229 | Other | lineage4 | None | ERR176568 | Other | lineage4.3 | None | SRR3675279 | Other | None | ERR176651 | HR-TB | None | ERR176643 | HR-TB | None | ERR2515228 | Other | lineage2.2.1 | None | ERR176740 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818929 | HR-TB | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR3675387 | Sensitive | None | ERR176751 | HR-TB | None | SRR3675510 | Other | None | ERR212033 | HR-TB | None | ERR212121 | HR-TB | None | ERR4816722 | Sensitive | lineage4.4 | None | ERR1035138 | MDR-TB | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | SRR6045555 | HR-TB | None | SRR6046210 | Other | lineage4 | None | ERR4821186 | Sensitive | lineage4.4 | None | SRR5341470 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045399 | Other | None | SRR6045233 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR6046397 | Other | None | ERR4830353 | Other | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6982365 | Other | lineage2.2.1 | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6511621 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR4818312 | Sensitive | lineage4.4 | gb | ERR502943 | HR-TB | None | ERR323045 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR400336 | Sensitive | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797036 | HR-TB | None | ERR3797063 | HR-TB | None | ERR400326 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4188247 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR11049544 | Sensitive | lineage4.1.2 | None | ERR11049573 | Sensitive | lineage4.1.2 | None | ERR4812155 | Sensitive | None | ERR4811030 | Sensitive | None | ERR6358991 | HR-TB | None | ERR9786843 | Other | None | ERR6359045 | HR-TB | None | ERR736865 | HR-TB | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR1172310 | HR-TB | None | ERR987722 | HR-TB | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1174897 | HR-TB | None | SRR3675455 | Sensitive | lineage4 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675488 | HR-TB | None |
---|