Rv0407 - c.882C>G
Drug resistance types
2 Sensitive
2 RR-TB
8 HR-TB
8 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage7 | 1 |
| lineage4.9 | 10 |
| M.canetti;lineage4.2 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.7;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 2 |
| La1;lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage3.1;lineage9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 35 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR4831117 | HR-TB | lineage4.9;lineage7 | None |
| ERR3797046 | HR-TB | lineage4.9 | None |
| ERR4769452 | Other | lineage4.9 | None |
| ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
| SRR11662690 | HR-TB | lineage4.9 | None |
| ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None |
| ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None |
| SRR14801759 | HR-TB | La1.7;lineage4.9 | None |
| SRR3675461 | RR-TB | lineage4.9 | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
| SRR3675441 | Other | lineage4.9 | None |
| ERR4811493 | HR-TB | lineage4.9 | None |
| SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
| ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| ERR9119669 | HR-TB | lineage4.9 | None |
| SRR10808805 | Other | La1;lineage4.9 | None |
| SRR3675449 | Other | M.canetti;lineage4.9 | None |
| SRR9970978 | Sensitive | La1;lineage4.1.2 | None |
| SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None |
| SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
| ERR3283055 | HR-TB | lineage4.9 | None |
| ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
| ERR3445504 | Other | lineage4.9;lineage6.1.3 | None |
| SRR25827418 | XDR-TB | lineage3.1;lineage9 | None |
| ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
| SRR6046577 | Other | lineage4.6.3;lineage4.9 | None |
| ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None |
| ERR4799025 | Other | lineage4.8 | None |
| SRR5341330 | Other | lineage4.9 | None |
| ERR4769450 | Other | lineage4.9 | None |
