Rv3596c - c.525C>G
Drug resistance types
3 Sensitive
3 RR-TB
15 HR-TB
3 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 1 |
| lineage4.9 | 12 |
| lineage2.1 | 1 |
| lineage2.2.1 | 4 |
| lineage2.2.1.1 | 2 |
| lineage4.2;lineage4.9 | 3 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1 | 1 |
| lineage3.1;lineage9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| La1.2.BCG | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.5 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage1.1.3.2 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 38 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR17658565 | Pre-XDR-TB | lineage3 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR26399265 | Other | lineage2.2.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR7898221 | MDR-TB | lineage1.1.2 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR3283042 | Other | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR5162090 | RR-TB | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR28868888 | Other | lineage1.1.3.2 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR4816151 | Sensitive | lineage4.8 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None |
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