Rv3245c - c.138C>G
Drug resistance types
0 Sensitive
0 RR-TB
10 HR-TB
9 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| M.canetti;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage4.9 | 3 |
| lineage4.6.3;lineage4.9 | 1 |
| 1 | |
| lineage3.1;lineage9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 29 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR3283018 | HR-TB | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR987722 | MDR-TB | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR29097026 | Other | lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | SRR28119827 | Other | La3;lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
|---|
