Rv0668 - c.564C>T
Drug resistance types
126 Sensitive
6 RR-TB
66 HR-TB
11 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
74 Other
lineage Counts
| lineage | Count |
|---|---|
| 62 | |
| lineage4.9 | 62 |
| lineage4 | 92 |
| lineage2.2.1 | 15 |
| lineage4.8 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.4.2;lineage2.2.1 | 1 |
| lineage4.1 | 3 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| lineage4.1.2.1 | 14 |
| lineage2.2 | 4 |
| La1.8.1 | 2 |
| La1.2 | 1 |
| La1 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage6 | 1 |
| lineage4.6.2.2 | 2 |
| lineage3 | 3 |
| lineage4.1.1.3 | 2 |
| La3 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage9;lineage3.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage1.2.1.1 | 1 |
| lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage5.1.4 | 1 |
| lineage1.1.2 | 1 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 291 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046492 | Other | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046802 | Other | lineage4 | None | ERR4831117 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6511621 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831638 | Sensitive | None | ERR4831841 | HR-TB | lineage4.4.2;lineage2.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR294266 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR502510 | Sensitive | lineage4 | None | ERR502943 | HR-TB | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323085 | Sensitive | lineage4 | None | ERR11488822 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3283058 | Other | lineage4.9 | None | ERR1035122 | Sensitive | None | ERR1063896 | Sensitive | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR363509 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797043 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR400336 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR400345 | Other | lineage4 | None | ERR4024991 | Other | None | ERR4178226 | Sensitive | lineage4 | None | ERR4769450 | HR-TB | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769452 | HR-TB | None | ERR4797264 | Sensitive | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769521 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797313 | HR-TB | None | ERR4798099 | Other | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797474 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798431 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR4811493 | HR-TB | None | ERR4812155 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR6358979 | Other | None | ERR6359069 | Other | lineage4.9 | None | ERR6359045 | HR-TB | None | ERR6359070 | Other | lineage4.9 | None | ERR736834 | Sensitive | lineage4 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9786597 | Sensitive | lineage4.6.2.2 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9896144 | Other | lineage3 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1158918 | Sensitive | lineage4 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1167271 | MDR-TB | lineage4.1.1.3 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1173568 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR13861163 | Sensitive | lineage4.9 | None | SRR13837566 | Other | lineage4.9 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR13861146 | Sensitive | lineage4.9 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR13861261 | Sensitive | lineage4.9 | None | SRR13861288 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861396 | HR-TB | lineage4.9 | None | SRR13861180 | Other | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR14801749 | Sensitive | None | SRR1791747 | Other | La1.8.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR1640750 | HR-TB | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR25827418 | Pre-XDR-TB | lineage9;lineage3.1 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR6325445 | HR-TB | None | ERR3275450 | Other | lineage4 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675486 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR4815471 | Other | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR176643 | HR-TB | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR3675270 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675279 | Other | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | SRR3675456 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675542 | Other | lineage4.9 | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR212001 | HR-TB | None | ERR212033 | HR-TB | None | SRR3675555 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341387 | Other | lineage4 | None | SRR5341453 | Sensitive | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR5341455 | Sensitive | lineage4 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR4819933 | Other | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR2517475 | Other | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR6045519 | HR-TB | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045503 | HR-TB | None | ERR278594 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | ERR4821219 | Pre-XDR-TB | lineage4.1.1.3.1 | None | ERR2693227 | Other | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6045952 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6045053 | Other | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046046 | Other | None | SRR6046245 | Other | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046397 | Other | None | SRR6325442 | HR-TB | None | SRR6325444 | HR-TB | None |
|---|
