Rv1173 - c.501T>C
Drug resistance types
0 Sensitive
2 RR-TB
14 HR-TB
9 MDR-TB
0 Pre-XDR-TB
1 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1;lineage9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage2.2 | 2 |
| La1.2;La1.8.1 | 1 |
| lineage3.1.2.2 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La1.2.BCG | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage2.1 | 1 |
| lineage4.2;lineage4.9 | 2 |
| lineage2.1;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La3;lineage2.1;lineage6.3 | 1 |
| La1.7;lineage4.9 | 3 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| 1 | |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 45 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR4798262 | HR-TB | La1.2.BCG | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR3675236 | Other | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None |
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