Rv3245c - c.-446G>C
Drug resistance types
41 Sensitive
9 RR-TB
76 HR-TB
16 MDR-TB
3 Pre-XDR-TB
1 XDR-TB
62 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 107 |
| lineage2.2.1 | 10 |
| lineage1;lineage4.9 | 1 |
| lineage3.1.2.2 | 1 |
| La3;lineage4.9 | 8 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.9;lineage9 | 3 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 4 |
| lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage2;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| La1.7;lineage4.3.4.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| La3;lineage4 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage1.1.3.1 | 1 |
| 2 | |
| lineage3.1;lineage9 | 1 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| La1.7;lineage4.9 | 5 |
| M.canetti;lineage4.9 | 3 |
| lineage4.4.1.1.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage6.1.1 | 2 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La1.7.1 | 1 |
| lineage3 | 2 |
| lineage4.1.1.3 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| La1.6;La3;lineage4.9 | 2 |
| lineage4 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage2.1 | 2 |
| La1.7 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.2;lineage4.9 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.3.4 | 1 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.1.2 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.8.1 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| La1.2;La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 208 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR323066 | HR-TB | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR3797063 | Other | La3;lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR502524 | MDR-TB | lineage4.9;lineage6.3 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR3675585 | HR-TB | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | SRR1180250 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR5341432 | Other | La1.7;lineage4.9;lineage7 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR2693257 | HR-TB | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR736834 | HR-TB | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR3283028 | Other | La3;lineage4 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR987722 | MDR-TB | None | SRR25827418 | XDR-TB | lineage3.1;lineage9 | None | ERR137286 | Other | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR9787014 | RR-TB | lineage6.1.1 | None | ERR3797079 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR4798504 | RR-TB | lineage3 | None | ERR6866639 | HR-TB | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR6866410 | HR-TB | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR3283024 | HR-TB | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | ERR4818536 | Other | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR3797014 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR2693254 | Other | La1.6;La3;lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR3799304 | RR-TB | lineage6.1.1 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR3283032 | Other | lineage4.9 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR1180996 | Other | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR736865 | MDR-TB | lineage4.3.2;lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR323037 | Other | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR5341453 | Other | lineage4.9 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR3283014 | Other | La3;lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR926164 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR4828872 | RR-TB | lineage4.2;lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR5311094 | HR-TB | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR22251329 | Other | lineage2.1 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR6046594 | Other | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR3797080 | Sensitive | lineage4.9 | None | ERR1063896 | HR-TB | None | ERR6358979 | HR-TB | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR3675441 | RR-TB | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR2693252 | HR-TB | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR926165 | Other | lineage4.9 | None | ERR3283031 | Other | La3;lineage4.9 | None | SRR1172310 | MDR-TB | lineage4.9 | None | ERR3797061 | Other | La1.6;La3;lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR2693231 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR3675234 | HR-TB | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None |
|---|
