EBG00000313325 - n.332C>T
Drug resistance types
132 Sensitive
91 RR-TB
43 HR-TB
55 MDR-TB
31 Pre-XDR-TB
0 XDR-TB
437 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.2.2 | 2 |
| lineage3 | 26 |
| lineage4.8 | 25 |
| lineage4.3.3 | 11 |
| lineage2.2.1 | 64 |
| lineage4.4.1.1 | 10 |
| La1.8.1 | 8 |
| lineage4.1.2 | 8 |
| lineage4.1.2.1 | 18 |
| lineage4.6 | 2 |
| lineage2.2.1.2 | 4 |
| lineage4.2.1 | 8 |
| lineage4.1.1.3 | 13 |
| lineage4.2.1.1 | 4 |
| lineage4.4.1.1.1 | 3 |
| lineage4.2.1;lineage2.2.1 | 1 |
| lineage4 | 19 |
| lineage4.9 | 386 |
| lineage1.2.1.2.1 | 7 |
| La1.8.2 | 8 |
| lineage4.9;lineage4.3.4.2.1;lineage4.3.4.1;lineage3;lineage2.2.1 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.3.4.2.1 | 14 |
| lineage4.3.4.1 | 5 |
| lineage6.1.1 | 1 |
| lineage4.3.4.2 | 7 |
| lineage4;lineage3.1 | 1 |
| lineage2.2.1.1 | 9 |
| lineage1.1.2 | 7 |
| La1.2 | 17 |
| lineage1.2.2.2 | 5 |
| lineage2.2.2 | 3 |
| lineage4.7 | 3 |
| lineage1.1.1 | 2 |
| lineage5.1.3 | 1 |
| lineage1.1.1.1 | 3 |
| lineage4.2.2.1 | 1 |
| lineage4.1.1 | 4 |
| lineage4.6.1.1 | 19 |
| lineage4.9;lineage4.2.1 | 1 |
| La1.6 | 1 |
| lineage3.1.2.1 | 4 |
| 6 | |
| lineage4.6.1;lineage3.1.1 | 1 |
| lineage3;lineage2.2 | 2 |
| lineage4.6.1;lineage3.1 | 2 |
| lineage3.1.1 | 5 |
| lineage4.3 | 1 |
| lineage4.3.2 | 2 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage4.4.1.2 | 3 |
| lineage4.4.2 | 3 |
| lineage4.3.2.1 | 4 |
| lineage4.5 | 1 |
| lineage4.9.1 | 2 |
| lineage1.1.3 | 1 |
| lineage1.1.3.2 | 3 |
| lineage4.9;lineage4.3 | 1 |
| lineage4.1.1.2 | 2 |
| lineage4.9;lineage1.1.2 | 1 |
| lineage4.6.1 | 4 |
| lineage4.6.3 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.4 | 1 |
| lineage4;lineage3 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 789 |
Geographic prevalence
Country level data for this variant is available for 49 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7131004 | Other | lineage4.6.2.2 | None | SRR7131007 | Sensitive | lineage3 | None | SRR7131035 | Sensitive | lineage4.8 | None | SRR7131050 | MDR-TB | lineage4.3.3 | None | SRR7131047 | MDR-TB | lineage4.3.3 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR7131048 | Other | lineage4.4.1.1 | None | SRR8073606 | Other | La1.8.1 | None | SRR7131096 | Other | lineage4.8 | None | SRR7131114 | Other | lineage4.1.2 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7131129 | Sensitive | lineage4.1.2.1 | None | SRR7131134 | Sensitive | lineage4.1.2.1 | None | SRR7131156 | Other | lineage4.6 | None | SRR7131169 | Other | lineage4.1.2.1 | None | SRR7131185 | Other | lineage4.1.2.1 | None | SRR7131220 | Other | lineage4.1.2.1 | None | SRR7131296 | Other | lineage4.3.3 | None | SRR7453034 | Sensitive | lineage2.2.1.2 | None | SRR7453031 | Sensitive | lineage2.2.1.2 | None | SRR7453032 | Sensitive | lineage2.2.1.2 | None | SRR7645828 | MDR-TB | lineage4.2.1 | None | SRR9613540 | Sensitive | lineage4.6.2.2 | None | SRR9971378 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR7645827 | Other | lineage4.2.1.1 | None | SRR7645834 | Other | lineage2.2.1 | None | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | SRR7645879 | MDR-TB | lineage4.2.1 | None | SRR8600310 | Other | La1.8.1 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR7755683 | Pre-XDR-TB | lineage4.2.1;lineage2.2.1 | None | SRR7755706 | MDR-TB | lineage4.2.1 | None | SRR9971163 | MDR-TB | lineage4.4.1.1.1 | None | ERR1023527 | RR-TB | lineage4 | None | ERR323057 | Sensitive | lineage4.9 | None | SRR9217354 | Sensitive | lineage1.2.1.2.1 | None | SRR7851307 | Other | La1.8.2 | None | DRR184644 | HR-TB | lineage2.2.1 | None | ERR024351 | MDR-TB | lineage2.2.1 | None | ERR036185 | MDR-TB | lineage4.9;lineage4.3.4.2.1;lineage4.3.4.1;lineage3;lineage2.2.1 | None | ERR036215 | Other | lineage4.8 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR037235 | Sensitive | lineage4.9 | None | ERR036194 | Other | lineage4.6.1.2 | None | ERR036225 | Other | lineage4.3.4.2.1 | None | ERR037529 | Other | lineage4.3.4.2.1 | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | ERR1034692 | Other | lineage1.2.1.2.1 | None | ERR1034722 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4 | None | ERR3283035 | Sensitive | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796619 | Other | lineage4.3.3 | None | ERR108444 | Other | lineage4.1.2 | ru | ERR1193714 | Sensitive | lineage4.3.4.1 | None | ERR1144990 | Other | lineage4.8 | None | ERR3283053 | Other | lineage4.9 | None | ERR3439225 | Other | La1.8.1 | None | ERR3801626 | Sensitive | lineage6.1.1 | None | ERR3470682 | Other | lineage3 | None | ERR3797075 | Sensitive | lineage4.9 | None | ERR3468549 | Sensitive | lineage4.9 | None | ERR3468754 | Sensitive | lineage4.9 | None | ERR3470663 | Sensitive | lineage3 | None | ERR3797035 | Other | lineage4.9 | None | ERR3797060 | Other | La1.8.1 | None | ERR3806453 | Other | lineage4.3.4.2 | None | ERR3828632 | Sensitive | lineage4.3.4.2 | None | ERR4423724 | RR-TB | lineage3 | None | ERR4188158 | Other | lineage4.9 | None | ERR4188218 | Sensitive | lineage4.9 | None | ERR405222 | Sensitive | lineage4;lineage3.1 | None | ERR4132447 | HR-TB | lineage4 | None | ERR4800483 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798777 | Other | lineage4.8 | in | ERR473279 | Other | lineage4.9 | None | ERR473311 | Sensitive | lineage4.9 | None | ERR473308 | HR-TB | lineage4.3.4.2.1 | None | ERR473337 | Other | lineage4.1.2 | None | ERR473340 | Sensitive | lineage1.1.2 | None | ERR4769429 | Other | lineage4.9 | None | ERR4769478 | Other | La1.2 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4798523 | MDR-TB | lineage1.2.2.2 | None | ERR5863929 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863931 | Pre-XDR-TB | lineage2.2.1 | None | ERR6362325 | RR-TB | lineage4.8 | None | ERR5863930 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865343 | MDR-TB | lineage2.2.1 | None | ERR5979826 | Sensitive | lineage4.9 | None | ERR5987219 | Pre-XDR-TB | lineage2.2.2 | None | ERR5987346 | RR-TB | lineage4.7 | None | ERR6140651 | Other | La1.8.2 | None | ERR6149875 | Other | La1.8.2 | None | ERR6198389 | Other | La1.2 | None | ERR6198394 | Other | La1.2 | None | ERR6201798 | Other | La1.2 | None | ERR6201800 | Other | La1.2 | None | ERR6201814 | Other | La1.2 | None | ERR6209443 | Other | La1.2 | None | ERR5864889 | MDR-TB | lineage2.2.1 | None | ERR6140667 | Other | La1.8.2 | None | ERR6149870 | Other | La1.8.2 | None | ERR6149868 | Other | La1.8.2 | None | ERR6149874 | Other | La1.8.2 | None | ERR6149876 | Other | La1.8.2 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6197041 | MDR-TB | lineage4.3.4.2 | None | ERR6198391 | Other | La1.2 | None | ERR6198390 | Other | La1.2 | None | ERR6201795 | Other | La1.2 | None | ERR6201802 | Other | La1.2 | None | ERR6201843 | Other | La1.2 | None | ERR6201832 | Other | La1.2 | None | ERR6201910 | Other | La1.2 | None | ERR6201937 | Other | La1.2 | None | ERR6208726 | Other | La1.2 | None | ERR6362363 | RR-TB | lineage4.8 | None | ERR736825 | Sensitive | lineage4.9 | None | ERR6362858 | Pre-XDR-TB | lineage2.2.2 | None | ERR751865 | Other | lineage1.1.1 | None | ERR736850 | Sensitive | lineage4.9 | None | ERR751310 | Sensitive | lineage5.1.3 | None | ERR970453 | RR-TB | lineage4.1.2 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR7801177 | Other | lineage4.3.4.2.1 | None | ERR7821140 | Sensitive | lineage2.2.1.1 | None | ERR7737918 | MDR-TB | lineage4.2.2.1 | None | ERR773804 | Sensitive | lineage4.9 | None | ERR7801178 | Other | lineage4.3.4.2.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR970451 | RR-TB | lineage4.1.2.1 | None | ERR970448 | RR-TB | lineage4.1.1.3 | None | ERR970458 | RR-TB | lineage4.1.1.3 | None | ERR970457 | RR-TB | lineage4.1.1.3 | None | ERR970459 | RR-TB | lineage4.1.1 | None | ERR972802 | RR-TB | lineage4.1.1.3 | None | ERR970455 | RR-TB | lineage4.1.2 | None | ERR972801 | RR-TB | lineage2.2.1.1 | None | SRR10315603 | MDR-TB | lineage4.8 | None | ERR9786844 | Other | lineage4.3.4.2 | None | ERR983250 | RR-TB | lineage4.1.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR987704 | HR-TB | lineage4.6.1.2 | None | SRR10315641 | MDR-TB | lineage4.4.1.1.1 | None | SRR1168955 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR10869231 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869241 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869293 | Pre-XDR-TB | lineage2.2.1 | None | SRR10993953 | Other | La1.6 | None | SRR11349188 | MDR-TB | lineage4.1.2.1 | None | SRR1140752 | MDR-TB | lineage3.1.2.1 | None | SRR1159158 | Other | lineage2.2.1 | None | SRR1162501 | Other | lineage2.2.1 | None | SRR10869085 | Sensitive | lineage2.2.1 | None | SRR1140595 | Sensitive | lineage4.6.1.1 | None | SRR1166181 | MDR-TB | lineage4 | None | SRR1172293 | Sensitive | lineage1.1.2 | None | SRR1172171 | Pre-XDR-TB | lineage4.2.1 | None | SRR1172706 | Sensitive | lineage2.2.1 | None | SRR1172359 | Pre-XDR-TB | lineage4.2.1 | None | SRR1172798 | Sensitive | lineage2.2.1 | None | SRR1172710 | Sensitive | lineage1.2.2.2 | None | SRR1172808 | Other | lineage4.9 | None | SRR1172938 | MDR-TB | lineage3 | None | SRR1172874 | Sensitive | lineage2.2.1 | None | SRR1173014 | MDR-TB | lineage3 | None | SRR1173069 | Other | lineage4.9 | None | SRR1173025 | Other | lineage4.9 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173165 | Sensitive | lineage2.2.1 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173269 | Sensitive | lineage4.9 | None | SRR1173293 | MDR-TB | lineage4.6.1;lineage3.1.1 | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1173343 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173380 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173344 | Sensitive | lineage4.6.1.1 | None | SRR1173384 | Other | lineage4 | None | SRR1173565 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1173416 | Other | lineage4.9 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR1173621 | MDR-TB | lineage3 | None | SRR1173704 | Sensitive | lineage4.6.1.1 | None | SRR1173705 | Other | lineage4.9 | None | SRR1173686 | MDR-TB | lineage3 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173720 | Other | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173727 | MDR-TB | lineage3 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1173764 | Sensitive | lineage4.9 | None | SRR1173800 | Pre-XDR-TB | lineage3;lineage2.2 | None | SRR1173768 | Sensitive | lineage4.9 | None | SRR1173799 | MDR-TB | lineage3.1.1 | None | SRR1173832 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1173833 | Other | lineage4.9 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR1174277 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175025 | Sensitive | lineage2.2.1 | None | SRR1175165 | Sensitive | lineage2.2.1 | None | SRR1180243 | MDR-TB | lineage4.2.1 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | SRR13591377 | Sensitive | lineage4.1.1.3 | None | SRR1181368 | Other | lineage4.9 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR1183958 | Other | lineage2.2.1 | None | SRR11972331 | HR-TB | lineage2.2.1 | None | SRR11972450 | MDR-TB | lineage2.2.1 | None | SRR12882631 | Other | lineage3.1.2.1 | None | SRR13199734 | Other | La1.2 | None | SRR1180982 | Other | lineage2.2.1 | None | SRR1181161 | Other | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1183100 | MDR-TB | lineage4.2.1 | None | SRR1184383 | Other | lineage4.9 | None | SRR1196582 | Other | lineage4.9 | None | SRR11972435 | Sensitive | lineage1.1.1 | None | SRR12199431 | Other | lineage4.3 | None | SRR12634543 | Sensitive | lineage4.8 | None | SRR12882020 | Other | lineage3.1.1 | None | SRR13591376 | Sensitive | lineage4.3.2 | None | SRR13861141 | HR-TB | lineage4.9 | None | SRR13837471 | HR-TB | lineage4.9 | None | SRR13837500 | Sensitive | lineage4.9 | None | SRR13837537 | Sensitive | lineage4.9 | None | SRR13591410 | Other | lineage4.9;lineage4.3.4.1 | None | SRR13861144 | Other | lineage4.9 | None | SRR13861142 | Other | lineage4.9 | None | SRR13861140 | MDR-TB | lineage4.9 | None | SRR13861143 | Other | lineage4.9 | None | SRR13861149 | RR-TB | lineage4.9 | None | SRR13861147 | Other | lineage4.9 | None | SRR13861152 | Sensitive | lineage4.9 | None | SRR13861150 | Other | lineage4.9 | None | SRR13861151 | RR-TB | lineage4.9 | None | SRR13861154 | RR-TB | lineage4.9 | None | SRR13861157 | Other | lineage4.9 | None | SRR13861156 | Other | lineage4.9 | None | SRR13861159 | Other | lineage4.9 | None | SRR13861158 | Other | lineage4.9 | None | SRR13861164 | Other | lineage4.9 | None | SRR13861162 | Other | lineage4.9 | None | SRR13861161 | Other | lineage4.9 | None | SRR13861174 | Other | lineage4.9 | None | SRR13861169 | RR-TB | lineage4.9 | None | SRR13861175 | Other | lineage4.9 | None | SRR13861180 | Other | lineage4.9 | None | SRR13861179 | Other | lineage4.9 | None | SRR13861187 | Other | lineage4.9 | None | SRR13861182 | RR-TB | lineage4.9 | None | SRR13861186 | Other | lineage4.9 | None | SRR13861183 | Other | lineage4.9 | None | SRR13861188 | Other | lineage4.9 | None | SRR13861192 | Other | lineage4.9 | None | SRR13861191 | Other | lineage4.9 | None | SRR13861195 | Other | lineage4.9 | None | SRR13861206 | Other | lineage4.9 | None | SRR13861200 | Other | lineage4.9 | None | SRR13861199 | RR-TB | lineage4.9 | None | SRR13861207 | Other | lineage4.9 | None | SRR13861197 | RR-TB | lineage4.9 | None | SRR13861201 | Other | lineage4.9 | None | SRR13861216 | RR-TB | lineage4.9 | None | SRR13861211 | HR-TB | lineage4.9 | None | SRR13861210 | Other | lineage4.9 | None | SRR13861213 | Other | lineage4.9 | None | SRR13861225 | Other | lineage4.9 | None | SRR13861219 | Other | lineage4.9 | None | SRR13861222 | RR-TB | lineage4.9 | None | SRR13861218 | RR-TB | lineage4.9 | None | SRR13861231 | Other | lineage4.9 | None | SRR13861217 | Other | lineage4.9 | None | SRR13861227 | Other | lineage4.9 | None | SRR13861232 | RR-TB | lineage4.9 | None | SRR13861236 | RR-TB | lineage4.9 | None | SRR13861233 | RR-TB | lineage4.9 | None | SRR13861240 | HR-TB | lineage4.9 | None | SRR13861230 | Other | lineage4.9 | None | SRR13861244 | Other | lineage4.9 | None | SRR13861243 | HR-TB | lineage4.9 | None | SRR13861248 | HR-TB | lineage4.9 | None | SRR13861246 | Other | lineage4.9 | None | SRR13861245 | RR-TB | lineage4.9 | None | SRR13861256 | Other | lineage4.9 | None | SRR13861254 | Other | lineage4.9 | None | SRR13861263 | Other | lineage4.9 | None | SRR13861258 | Other | lineage4.9 | None | SRR13861267 | Other | lineage4.9 | None | SRR13861262 | RR-TB | lineage4.9 | None | SRR13861268 | Other | lineage4.9 | None | SRR13861264 | HR-TB | lineage4.9 | None | SRR13861274 | RR-TB | lineage4.9 | None | SRR13861265 | HR-TB | lineage4.9 | None | SRR13861276 | RR-TB | lineage4.9 | None | SRR13861280 | Other | lineage4.9 | None | SRR13861275 | Sensitive | lineage4.9 | None | SRR13861282 | RR-TB | lineage4.9 | None | SRR13861278 | Other | lineage4.9 | None | SRR13861281 | Other | lineage4.9 | None | SRR13861284 | RR-TB | lineage4.9 | None | SRR13861283 | Other | lineage4.9 | None | SRR13861286 | Other | lineage4.9 | None | SRR13861294 | Other | lineage4.9 | None | SRR13861285 | Other | lineage4.9 | None | SRR13861297 | Other | lineage4.9 | None | SRR13861293 | Other | lineage4.9 | None | SRR13861292 | RR-TB | lineage4.9 | None | SRR13861307 | Other | lineage4.9 | None | SRR13861299 | RR-TB | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861303 | Other | lineage4.9 | None | SRR13861314 | Other | lineage4.9 | None | SRR13861312 | Other | lineage4.9 | None | SRR13861309 | HR-TB | lineage4.9 | None | SRR13861316 | RR-TB | lineage4.9 | None | SRR13861318 | Other | lineage4.9 | None | SRR13861320 | RR-TB | lineage4.9 | None | SRR13861324 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861325 | Other | lineage4.9 | None | SRR13861321 | RR-TB | lineage4.9 | None | SRR13861323 | Other | lineage4.9 | None | SRR13861330 | Other | lineage4.9 | None | SRR13861328 | Other | lineage4.9 | None | SRR13861329 | Other | lineage4.9 | None | SRR13861336 | Other | lineage4.9 | None | SRR13861331 | Other | lineage4.9 | None | SRR13861340 | Other | lineage4.9 | None | SRR13861343 | Other | lineage4.9 | None | SRR13861345 | Other | lineage4.9 | None | SRR13861341 | RR-TB | lineage4.9 | None | SRR13861346 | RR-TB | lineage4.9 | None | SRR13861351 | Other | lineage4.9 | None | SRR13861348 | Other | lineage4.9 | None | SRR13861356 | Other | lineage4.9 | None | SRR13861353 | Other | lineage4.9 | None | SRR13861352 | Other | lineage4.9 | None | SRR13861361 | Other | lineage4.9 | None | SRR13861355 | RR-TB | lineage4.9 | None | SRR13861370 | Other | lineage4.9 | None | SRR13861362 | Other | lineage4.9 | None | SRR13861369 | Other | lineage4.9 | None | SRR13861372 | Other | lineage4.9 | None | SRR13861379 | Other | lineage4.9 | None | SRR13861375 | Other | lineage4.9 | None | SRR13861378 | RR-TB | lineage4.9 | None | SRR13861373 | Other | lineage4.9 | None | SRR13861374 | Other | lineage4.9 | None | SRR13861377 | Other | lineage4.9 | None | SRR13861384 | HR-TB | lineage4.9 | None | SRR13861383 | Other | lineage4.9 | None | SRR13861389 | Other | lineage4.9 | None | SRR13861387 | Other | lineage4.9 | None | SRR13861392 | Other | lineage4.9 | None | SRR13861390 | Other | lineage4.9 | None | SRR13861406 | MDR-TB | lineage4.9 | None | SRR13861391 | Other | lineage4.9 | None | SRR13861393 | Sensitive | lineage4.9 | None | SRR13861394 | Other | lineage4.9 | None | SRR13861397 | HR-TB | lineage4.9 | None | SRR13861402 | Other | lineage4.9 | None | SRR13861403 | Other | lineage4.9 | None | SRR13861400 | Other | lineage4.9 | None | SRR13861411 | HR-TB | lineage4.9 | None | SRR13861408 | MDR-TB | lineage4.9 | None | SRR13861415 | Other | lineage4.9 | None | SRR13861410 | MDR-TB | lineage4.9 | None | SRR13861416 | Other | lineage4.9 | None | SRR13861420 | Other | lineage4.9 | None | SRR13861418 | HR-TB | lineage4.9 | None | SRR13861417 | HR-TB | lineage4.9 | None | SRR13861421 | Other | lineage4.9 | None | SRR13861419 | Other | lineage4.9 | None | SRR13861423 | Other | lineage4.9 | None | SRR13861426 | Other | lineage4.9 | None | SRR13861422 | Other | lineage4.9 | None | SRR13861428 | Other | lineage4.9 | None | SRR13861429 | Other | lineage4.9 | None | SRR13861430 | Other | lineage4.9 | None | SRR13861433 | Other | lineage4.9 | None | SRR13861442 | Other | lineage4.9 | None | SRR13861431 | Other | lineage4.9 | None | SRR13861438 | Other | lineage4.9 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR13861437 | RR-TB | lineage4.9 | None | SRR13861446 | RR-TB | lineage4.9 | None | SRR13861440 | RR-TB | lineage4.9 | None | SRR13861443 | RR-TB | lineage4.9 | None | SRR13861449 | Other | lineage4.9 | None | SRR13861447 | RR-TB | lineage4.9 | None | SRR13861450 | RR-TB | lineage4.9 | None | SRR13861453 | Other | lineage4.9 | None | SRR13861451 | RR-TB | lineage4.9 | None | SRR13861457 | Other | lineage4.9 | None | SRR13861454 | RR-TB | lineage4.9 | None | SRR13861452 | Other | lineage4.9 | None | SRR13861461 | Other | lineage4.9 | None | SRR13861459 | HR-TB | lineage4.9 | None | SRR13861462 | Other | lineage4.9 | None | SRR13861465 | RR-TB | lineage4.9 | None | SRR13861464 | Other | lineage4.9 | None | SRR13861463 | Other | lineage4.9 | None | SRR13861468 | Other | lineage4.9 | None | SRR13861476 | Other | lineage4.9 | None | SRR13861470 | Other | lineage4.9 | None | SRR13861480 | Other | lineage4.9 | None | SRR13861479 | Other | lineage4.9 | None | SRR13861482 | Other | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861481 | RR-TB | lineage4.9 | None | SRR13861486 | Other | lineage4.9 | None | SRR13861487 | Other | lineage4.9 | None | SRR13861491 | RR-TB | lineage4.9 | None | SRR13861493 | HR-TB | lineage4.9 | None | SRR13861496 | Other | lineage4.9 | None | SRR13861494 | Other | lineage4.9 | None | SRR13861495 | MDR-TB | lineage4.9 | None | SRR13861499 | Other | lineage4.9 | None | SRR13861498 | RR-TB | lineage4.9 | None | SRR13861501 | RR-TB | lineage4.9 | None | SRR13861497 | HR-TB | lineage4.9 | None | SRR13861506 | RR-TB | lineage4.9 | None | SRR13861503 | Other | lineage4.9 | None | SRR13861516 | Other | lineage4.9 | None | SRR13861507 | Other | lineage4.9 | None | SRR13861514 | Other | lineage4.9 | None | SRR13861504 | Other | lineage4.9 | None | SRR13861515 | Other | lineage4.9 | None | SRR13861523 | Other | lineage4.9 | None | SRR13861521 | Other | lineage4.9 | None | SRR13861519 | Other | lineage4.9 | None | SRR13861524 | RR-TB | lineage4.9 | None | SRR13861522 | Other | lineage4.9 | None | SRR13861529 | Sensitive | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR13861532 | Other | lineage4.9 | None | SRR13861531 | Other | lineage4.9 | None | SRR13861530 | RR-TB | lineage4.9 | None | SRR13861533 | Other | lineage4.9 | None | SRR13861535 | Other | lineage4.9 | None | SRR13861537 | Other | lineage4.9 | None | SRR13861534 | Other | lineage4.9 | None | SRR13861547 | RR-TB | lineage4.9 | None | SRR13861545 | Other | lineage4.9 | None | SRR13861543 | RR-TB | lineage4.9 | None | SRR13861544 | Other | lineage4.9 | None | SRR13861555 | Other | lineage4.9 | None | SRR13861559 | Other | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR13861554 | Other | lineage4.9 | None | SRR13861562 | Other | lineage4.9 | None | SRR13861566 | Other | lineage4.9 | None | SRR13861567 | Other | lineage4.9 | None | SRR13861569 | Other | lineage4.9 | None | SRR13861565 | RR-TB | lineage4.9 | None | SRR13861568 | Other | lineage4.9 | None | SRR13861574 | Other | lineage4.9 | None | SRR13861573 | Other | lineage4.9 | None | SRR13861572 | Other | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861570 | Other | lineage4.9 | None | SRR13861584 | Other | lineage4.9 | None | SRR13861576 | Other | lineage4.9 | None | SRR13861579 | Other | lineage4.9 | None | SRR13861580 | Other | lineage4.9 | None | SRR13861583 | Other | lineage4.9 | None | SRR13861589 | RR-TB | lineage4.9 | None | SRR13861586 | Other | lineage4.9 | None | SRR13861587 | RR-TB | lineage4.9 | None | SRR13861593 | Other | lineage4.9 | None | SRR13861600 | Other | lineage4.9 | None | SRR13861597 | Other | lineage4.9 | None | SRR13861598 | Other | lineage4.9 | None | SRR13861608 | Other | lineage4.9 | None | SRR13861618 | RR-TB | lineage4.9 | None | SRR13861607 | Other | lineage4.9 | None | SRR13861601 | Sensitive | lineage4.9 | None | SRR13861613 | Other | lineage4.9 | None | SRR13861617 | Other | lineage4.9 | None | SRR13861624 | Other | lineage4.9 | None | SRR13861627 | Other | lineage4.9 | None | SRR13861619 | Other | lineage4.9 | None | SRR13861630 | Other | lineage4.9 | None | SRR13861626 | Other | lineage4.9 | None | SRR13861632 | MDR-TB | lineage4.9 | None | SRR13861631 | RR-TB | lineage4.9 | None | SRR13861634 | HR-TB | lineage4.9 | None | SRR13861639 | Other | lineage4.9 | None | SRR13861637 | Other | lineage4.9 | None | SRR13861642 | Other | lineage4.9 | None | SRR13861641 | Other | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR13861649 | Other | lineage4.9 | None | SRR13861651 | Other | lineage4.9 | None | SRR13861648 | Other | lineage4.9 | None | SRR13861653 | Other | lineage4.9 | None | SRR13861654 | Other | lineage4.9 | None | SRR13861664 | Other | lineage4.9 | None | SRR13861658 | Other | lineage4.9 | None | SRR13861673 | Other | lineage4.9 | None | SRR13861668 | Other | lineage4.9 | None | SRR13861669 | Other | lineage4.9 | None | SRR13861672 | Sensitive | lineage4.9 | None | SRR13861678 | RR-TB | lineage4.9 | None | SRR13861679 | Other | lineage4.9 | None | SRR13861677 | HR-TB | lineage4.9 | None | SRR13861680 | Other | lineage4.9 | None | SRR13861683 | Other | lineage4.9 | None | SRR13861682 | Other | lineage4.9 | None | SRR13861689 | Other | lineage4.9 | None | SRR13861685 | Other | lineage4.9 | None | SRR13861691 | Other | lineage4.9 | None | SRR13861693 | Other | lineage4.9 | None | SRR13861692 | Other | lineage4.9 | None | SRR13861696 | Other | lineage4.9 | None | SRR13861694 | Other | lineage4.9 | None | SRR13861697 | Other | lineage4.9 | None | SRR13861702 | Other | lineage4.9 | None | SRR13861706 | Other | lineage4.9 | None | SRR13861707 | Other | lineage4.9 | None | SRR13861711 | Other | lineage4.9 | None | SRR13861705 | Other | lineage4.9 | None | SRR13861714 | Other | lineage4.9 | None | SRR13861710 | Other | lineage4.9 | None | SRR13861715 | Other | lineage4.9 | None | SRR13861717 | Other | lineage4.9 | None | SRR13861718 | Other | lineage4.9 | None | SRR13861727 | Other | lineage4.9 | None | SRR13861720 | Other | lineage4.9 | None | SRR13861725 | Other | lineage4.9 | None | SRR13861724 | RR-TB | lineage4.9 | None | SRR13861729 | RR-TB | lineage4.9 | None | SRR13861734 | Other | lineage4.9 | None | SRR13861728 | Other | lineage4.9 | None | SRR13861737 | RR-TB | lineage4.9 | None | SRR13861735 | MDR-TB | lineage4.9 | None | SRR13861736 | RR-TB | lineage4.9 | None | SRR17567952 | Other | lineage4.4.1.2 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR15316549 | RR-TB | lineage4.4.2 | None | SRR15368973 | Other | None | SRR15522850 | HR-TB | lineage1.1.2 | None | SRR15723287 | Other | lineage4.4.2 | None | SRR17658580 | Sensitive | lineage4.4.1.2 | None | SRR21595948 | Sensitive | lineage4.1.2.1 | None | SRR1791908 | Other | La1.8.1 | None | SRR2101628 | Other | lineage4.3.2.1 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR21240243 | Other | lineage4.3.3 | None | SRR1791940 | Other | La1.8.1 | None | SRR1792140 | Other | La1.8.1 | None | SRR19612366 | Other | lineage4.5 | None | SRR2101448 | Other | lineage2.2.1 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | SRR2101643 | Other | lineage2.2.1 | None | SRR2101691 | Other | lineage2.2.1 | None | SRR21658391 | Other | lineage4.1.1.3 | None | SRR21676929 | Other | lineage1.2.1.2.1 | None | SRR21675949 | Other | lineage4.3.3 | None | SRR21728339 | Other | lineage3 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR21711124 | Other | lineage1.1.3 | None | ERR181913 | Sensitive | lineage4.3.4.2.1 | mw | SAMN02599090 | MDR-TB | lineage3 | None | SRR21728719 | HR-TB | lineage4.8 | None | ERR4814503 | Pre-XDR-TB | lineage2.2.1 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR190390 | Sensitive | lineage4.3.4.2.1 | mw | ERR2446248 | Other | lineage3 | nl | ERR1199090 | Sensitive | lineage4.6.1.1 | ug | ERR1873560 | Pre-XDR-TB | lineage2.2.1 | None | ERR1873563 | Pre-XDR-TB | lineage2.2.1 | None | ERR181719 | Sensitive | lineage4.3.4.2.1 | mw | SAMN02419540 | Other | lineage2.2.1 | None | ERR176597 | Other | lineage1.1.2 | mw | ERR176464 | Other | lineage3.1.1 | None | ERR4812968 | MDR-TB | lineage4.3.3 | None | ERR464760 | Sensitive | lineage4.4.1.1 | ch | ERR4814573 | Other | lineage1.1.3.2 | None | ERR164004 | Sensitive | lineage4.9;lineage4.3 | None | ERR1633962 | Sensitive | lineage2.2.1.1 | None | ERR3275450 | Other | lineage4 | None | SRR3675230 | RR-TB | lineage3 | None | ERR1750909 | RR-TB | lineage4.1.1.2 | None | ERR1750930 | Sensitive | lineage4.1.1.3 | za | ERR176470 | Other | lineage4.3.4.1 | mw | SRR3675273 | Sensitive | lineage3 | None | ERR182046 | Other | lineage4.3.4.2.1 | mw | ERR4814961 | Sensitive | lineage4.1.2.1 | gb | ERR1199071 | HR-TB | lineage4.6.1.1 | ug | ERR176630 | Other | lineage1.1.3.2 | mw | ERR176690 | Sensitive | lineage4.3.4.2.1 | mw | ERR2124088 | Other | lineage4.4.1.1 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | ERR4816206 | Sensitive | lineage4.9;lineage1.1.2 | gb | SAMN02599067 | Sensitive | lineage2.2.1 | None | ERR4817089 | HR-TB | lineage1.2.1.2.1 | gb | ERR2124091 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR216901 | Other | lineage3.1.1 | None | SAMN02567685 | Pre-XDR-TB | lineage2.2.1 | None | ERR2229780 | Other | lineage4.9 | None | ERR2229332 | RR-TB | lineage4.8 | None | ERR2229781 | Other | lineage4.9 | None | SAMN02599073 | Sensitive | lineage2.2.1 | None | ERR2228941 | Other | lineage4.8 | None | ERR192071 | Other | La1.8.1 | None | ERR4816991 | Sensitive | lineage4.9 | None | ERR2229031 | Other | lineage4.9 | None | ERR2229033 | Other | lineage4.8 | None | ERR2229554 | Other | lineage4.8 | None | ERR4817347 | HR-TB | lineage4 | None | SRR3675557 | Other | lineage4.9 | None | ERR1199084 | Sensitive | lineage4.6.1.1 | ug | SAMN02567670 | Sensitive | lineage4.6.1.1 | None | ERR2124090 | MDR-TB | lineage2.2.1 | None | ERR2124092 | HR-TB | lineage1.2.2.2 | None | ERR2124089 | MDR-TB | lineage2.2.1 | None | ERR216928 | Other | lineage4.9.1 | None | ERR1034791 | RR-TB | None | ERR2229336 | Other | lineage4.8 | None | ERR2229337 | Other | lineage4.8 | None | ERR2229358 | Other | lineage4.8 | None | SAMN02628479 | MDR-TB | lineage4.2.1 | ir | ERR1199076 | Sensitive | lineage4.6.1.1 | None | ERR1199091 | Sensitive | lineage4.6.1 | ug | ERR4816755 | Other | lineage4.1.1.3 | None | ERR2228874 | Other | lineage4 | None | ERR1199081 | Sensitive | lineage4.6.1.1 | None | ERR1193643 | Sensitive | lineage4.3.4.2 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228822 | Other | lineage4.9 | None | SAMN02599089 | MDR-TB | lineage3 | None | ERR2228859 | RR-TB | lineage4 | None | ERR2228888 | Other | lineage4.8 | None | ERR4817297 | Other | lineage4.8 | None | ERR2228873 | Other | lineage4.8 | None | ERR4817756 | Sensitive | lineage4.9 | None | SRR4034677 | Other | lineage2.2.1 | za | ERR2179816 | Sensitive | lineage4 | None | SRR5065506 | HR-TB | lineage1.1.1.1 | None | SRR5065436 | HR-TB | lineage2.2.1 | None | SRR5065440 | Other | lineage2.2.1.2 | None | ERR4817817 | Sensitive | lineage3 | None | SRR5065527 | Other | lineage2.2.1 | None | ERR2510807 | Other | lineage4.6 | None | ERR2510746 | Other | lineage2.2.1 | None | ERR2510812 | Other | lineage4.1.2.1 | None | ERR1199087 | Sensitive | lineage4.6.1.1 | None | SAMN02599072 | Sensitive | lineage2.2.1 | None | ERR2510820 | Other | lineage4.8 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | ERR1193644 | HR-TB | lineage4.3.3 | None | ERR1199086 | Sensitive | lineage4.6.1.1 | ug | ERR245790 | Sensitive | None | ERR2515315 | Sensitive | lineage4.1.1.3 | None | ERR1873445 | MDR-TB | lineage2.2.1 | None | ERR1199085 | Sensitive | lineage4.6.1.1 | ug | ERR1199065 | Sensitive | lineage4.6.1 | None | ERR3275434 | Other | lineage4.1.2.1 | nl | ERR2446433 | Other | lineage4.1.2.1 | None | ERR464749 | Sensitive | lineage4.4.1.1 | ch | SRR5341375 | Other | lineage4.9 | None | SRR5341417 | Pre-XDR-TB | lineage3 | None | ERR1199080 | Sensitive | lineage4.6.1.1 | ug | ERR4819322 | Other | lineage4;lineage1.1 | None | SRR5341387 | Other | lineage4 | None | SRR5341390 | HR-TB | lineage1.1.2 | None | SRR5341396 | Other | lineage4 | None | SRR5341405 | Pre-XDR-TB | lineage3 | in | SRR5341407 | Pre-XDR-TB | lineage3.1.2.1 | None | SRR5341425 | Other | lineage4 | None | SRR5341423 | Other | lineage1.1.2 | None | SRR5341429 | HR-TB | lineage3.1.2.1 | None | ERR1873557 | Pre-XDR-TB | lineage2.2.1 | None | ERR1199073 | Sensitive | lineage4.6.1.1 | ug | ERR464762 | Sensitive | lineage4.4.1.1 | ch | SRR5341225 | Other | lineage3 | in | ERR2514469 | Other | lineage3.1.1 | None | ERR4819787 | Other | lineage4.1.2.1 | None | ERR1199089 | Sensitive | lineage4.6.1.1 | ug | SRR5341295 | Sensitive | lineage1.2.2.2 | in | ERR4820511 | Sensitive | lineage4.3.3 | None | SRR5341300 | Other | lineage4 | None | ERR2515999 | Sensitive | lineage4.3.4.2.1 | None | ERR2446382 | Other | lineage4 | None | SRR5341306 | Pre-XDR-TB | lineage4.4 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341312 | Pre-XDR-TB | lineage2.2.1 | None | ERR1199077 | Sensitive | lineage4.6.1 | ug | ERR1193653 | Sensitive | lineage4.3.4.2.1 | ug | ERR4820845 | MDR-TB | lineage4.8 | None | SAMN02599068 | Sensitive | lineage1.2.2.2 | None | SRR5341467 | Other | lineage4 | None | SRR5341340 | MDR-TB | lineage3 | None | SRR5341360 | Pre-XDR-TB | lineage3 | in | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | ERR2747615 | Sensitive | lineage4.9 | None | ERR1199088 | Sensitive | lineage4.6.1.1 | ug | SRR5526841 | MDR-TB | lineage2.2.1.1 | None | ERR1199082 | Sensitive | lineage4.6.1.1 | None | ERR1193651 | Sensitive | lineage4.3.3 | cd | ERR2747622 | Sensitive | lineage4.9 | None | ERR4821927 | HR-TB | lineage4.3.4.1 | None | ERR3275567 | Other | lineage3 | nl | ERR4821300 | Other | lineage4.3.4.2 | gb | SRR6045620 | Other | lineage3 | None | SRR6046152 | Other | lineage4.9 | None | SRR6045036 | Other | lineage4;lineage3 | None | SRR6045764 | Sensitive | lineage4.9 | None | SRR6044830 | Other | lineage4.9 | None | SRR6045320 | Other | lineage4.9 | None | SRR6045124 | Other | lineage4.9 | None | SRR6046015 | Other | lineage4.9 | None | SRR6045332 | Other | lineage4.9 | None | ERR4829192 | Other | lineage4.4.1.1 | None | ERR4829182 | Sensitive | lineage1.2.1.2.1 | it | ERR4829196 | Other | lineage4.1.2 | None | ERR2851371 | Other | lineage4.9 | None | ERR4829907 | HR-TB | lineage4.1.2.1 | it | ERR4828811 | Other | lineage4.1.1 | None | ERR4829264 | Sensitive | lineage4.8 | None | ERR4829623 | Sensitive | lineage4.8 | None | ERR464729 | MDR-TB | lineage4.4.1.1 | ch | ERR279657 | Sensitive | lineage2.2.1.1 | None | ERR4829870 | Other | lineage4.4.1.1 | None | SRR6389899 | Other | lineage4.1.2 | None | SRR6397396 | HR-TB | lineage1.2.1.2.1 | None | SRR6397359 | Other | lineage4.3.2 | ca | SRR6397406 | Other | lineage4.1.2.1 | None | SRR6397551 | Other | lineage4.1.1.3 | None | SRR6152854 | Other | lineage4.1.2.1 | None | SRR6397548 | HR-TB | lineage1.2.1.2.1 | None | SRR6397441 | Other | lineage4 | None | SRR6152886 | HR-TB | lineage3 | None | SRR6397642 | RR-TB | None | SRR6397585 | Other | lineage4.4.1.2 | None | SRR6397588 | Other | lineage2.2.1 | None | SRR6152979 | Other | lineage4.7 | None | SRR6397568 | Other | lineage4.1.1 | None | SRR6397575 | Other | lineage4.3.4.2.1 | None | SRR6152986 | Other | lineage2.2.1 | None | SRR6397638 | Other | lineage4.2.1.1 | None | SRR6153036 | Other | None | SRR6153042 | Other | lineage4.4.1.1 | None | SRR6397727 | Other | lineage4.2.1.1 | None | SRR6397721 | Other | lineage4.2.1.1 | None | SRR6397771 | Other | lineage1.1.1.1 | None | SRR6397770 | Other | lineage4.7 | None | SRR6397818 | RR-TB | lineage4.4.1.1 | None | SRR6398007 | Other | lineage4.1.2.1 | ca | SRR6153268 | Other | lineage2.2.1.1 | ca | ERR4831633 | RR-TB | lineage4.9;lineage2.2 | None | ERR4831631 | HR-TB | lineage4.9 | None | ERR3078008 | MDR-TB | lineage4.6.1 | None | ERR1199062 | Sensitive | lineage4.6.1.1 | ug | ERR495188 | Sensitive | lineage2.2.1.1 | None | SRR6856094 | Other | lineage2.2.1 | None | SRR6856090 | Sensitive | lineage4.3.2.1 | None | SRR6982088 | Other | lineage4.1.1.2 | None | SRR6856091 | Sensitive | lineage4.1.1.3 | None | SRR671871 | Sensitive | lineage2.2.1 | cn | SRR6982140 | Other | lineage2.2 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6982194 | Other | lineage2.2.1 | None | SRR6896539 | MDR-TB | lineage3 | None | SRR6896444 | Other | lineage2.2.1 | None | SRR6982494 | Other | lineage2.2.2 | None | SRR6982275 | Other | lineage2.2.1 | None | SRR6832504 | MDR-TB | lineage2.2.1 | None | SRR6832507 | Other | lineage4.8 | None | SRR6982383 | Other | lineage4.3.2.1 | None | SRR6824423 | Sensitive | lineage4.4.2 | None | SRR6981966 | Other | lineage2.2.1 | None | SRR6855905 | Other | lineage4.1.2 | None | SRR6855896 | Other | lineage4.3.4.2.1 | None | SRR6982400 | Other | lineage2.2.1 | None | SRR6855957 | Sensitive | lineage2.2.1 | None | ERR5162127 | Sensitive | lineage4.9 | None | SRR6982066 | Other | lineage4.3.2.1 | None | ERR502942 | Sensitive | lineage4.9 | None |
|---|
