EBG00000313325 - n.1483C>T
Drug resistance types
69 Sensitive
1 RR-TB
8 HR-TB
9 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
146 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 19 |
| lineage4.9 | 126 |
| La1.2.BCG;lineage4.9 | 3 |
| lineage3 | 1 |
| lineage4.1.2.1 | 5 |
| lineage4.6.1.1 | 1 |
| lineage1.2.2.2 | 3 |
| lineage4.8.1 | 2 |
| La1.8.2 | 4 |
| lineage2.2.1;lineage4 | 2 |
| La1.8.1 | 4 |
| La1.7.1 | 3 |
| lineage4.3.3 | 5 |
| La1.2 | 7 |
| lineage4.8 | 7 |
| lineage1.1.3.2 | 2 |
| lineage4.1.1.2 | 1 |
| La1.2.BCG | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4 | 1 |
| lineage1.1.2 | 2 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage4.1.1.1 | 3 |
| lineage4.3.2.1 | 4 |
| lineage3.1.1 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage4.3.4.2 | 3 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.4.1.1 | 4 |
| lineage2.2.1.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage2.2.2 | 1 |
| lineage1.1.3 | 1 |
| lineage4.6.1.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.5 | 2 |
| lineage4.6.4 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.7 | 1 |
| lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 237 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6982075 | Sensitive | lineage4.9 | None | ERR560438 | Other | lineage4.9 | None | ERR560449 | HR-TB | La1.2.BCG;lineage4.9 | None | SRR13861443 | Other | lineage4.9 | None | SRR21728339 | Other | lineage3 | None | SRR7443794 | Sensitive | lineage4.9 | None | ERR4820968 | Sensitive | lineage4.1.2.1 | gb | ERR1199001 | Sensitive | lineage4.6.1.1 | None | SRR3105736 | Sensitive | lineage1.2.2.2 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR13861180 | Other | lineage4.9 | None | SRR1238559 | Other | lineage4.9 | None | SRR13861531 | Other | lineage4.9 | None | ERR6149870 | Other | La1.8.2 | None | ERR027451 | Pre-XDR-TB | lineage2.2.1 | ru | SRR13861353 | Other | lineage4.9 | None | SRR11972311 | Other | lineage2.2.1;lineage4 | None | SRR1792140 | Other | La1.8.1 | None | SRR13861143 | RR-TB | lineage4.9 | None | SRR13861566 | Other | lineage4.9 | None | ERR560442 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR7236253 | Other | La1.7.1 | None | SRR7069704 | Sensitive | lineage4.3.3 | None | SRR7240324 | Other | La1.8.1 | None | ERR6198389 | Other | La1.2 | None | SRR6832359 | Sensitive | lineage2.2.1 | None | SRR13861188 | Other | lineage4.9 | None | SRR13861264 | HR-TB | lineage4.9 | None | SRR13861345 | Other | lineage4.9 | None | SRR13861519 | Other | lineage4.9 | None | SRR13861522 | Other | lineage4.9 | None | SRR13861486 | Other | lineage4.9 | None | ERR867574 | Other | lineage4.9 | None | SRR13861175 | Other | lineage4.9 | None | ERR6201814 | Other | La1.2 | None | SRR11349188 | MDR-TB | lineage4.1.2.1 | None | SRR13861331 | Other | lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR13861598 | Other | lineage4.9 | None | SRR13861497 | HR-TB | lineage4.9 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR13861567 | Other | lineage4.9 | None | SRR13861416 | Other | lineage4.9 | None | SRR7443734 | Sensitive | lineage4.9 | None | SRR7443726 | Sensitive | lineage4.9 | None | SRR2101663 | Sensitive | lineage1.1.3.2 | None | SRR13861219 | Other | lineage4.9 | None | SRR7443738 | Sensitive | lineage4.9 | None | SRR6982088 | Other | lineage4.1.1.2 | None | ERR560450 | Other | La1.2.BCG | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR7821182 | Other | lineage1.1.3.2 | None | SRR13861429 | Other | lineage4.9 | None | SRR21277822 | Sensitive | lineage2.2.1.1 | None | SRR6045289 | Other | lineage2.2;lineage4.9 | None | SRR13861179 | Other | lineage4.9 | None | SRR13861150 | Other | lineage4.9 | None | ERR2229781 | Other | lineage4.9 | None | SRR7443769 | Sensitive | lineage4 | None | ERR9117681 | Sensitive | lineage4.3.3 | None | SRR13861428 | Other | lineage4.9 | None | ERR4816429 | Other | lineage1.1.2 | None | ERR6359064 | Sensitive | lineage4.9 | None | SRR13861201 | Other | lineage4.9 | None | SRR13861430 | Other | lineage4.9 | None | SRR13861431 | Other | lineage4.9 | None | SRR13861555 | Other | lineage4.9 | None | ERR4820777 | Sensitive | lineage4.1.2.1 | None | SRR6856087 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR13861384 | Other | lineage4.9 | None | SRR13861415 | Other | lineage4.9 | None | SRR13861725 | Other | lineage4.9 | None | ERR4815795 | Other | lineage1.1.2 | None | SRR13861495 | HR-TB | lineage4.9 | None | SRR13861392 | Other | lineage4.9 | None | SRR13861303 | Other | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR13861714 | Other | lineage4.9 | None | SRR6982037 | Sensitive | lineage4.1.1.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR13861217 | Other | lineage4.9 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR7443757 | Sensitive | lineage4.9 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR2229033 | Other | lineage4.8 | None | SRR13861597 | Other | lineage4.9 | None | SRR6982328 | Sensitive | lineage3.1.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR13861438 | Other | lineage4.9 | None | ERR2229780 | Other | lineage4.9 | None | SRR13861231 | Other | lineage4.9 | None | ERR1665402 | MDR-TB | lineage2.2.1 | None | SRR6982558 | Sensitive | lineage4.3.4.2.1 | None | ERR3806453 | Other | lineage4.3.4.2 | None | SRR6982398 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | SRR18391772 | Other | La1.7.1 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | SRR21675949 | Other | lineage4.3.3 | None | SRR13861487 | Other | lineage4.9 | None | SRR13861379 | Other | lineage4.9 | None | ERR6201802 | Other | La1.2 | None | SRR13861631 | Other | lineage4.9 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6982076 | Sensitive | lineage4.9 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR21714045 | Other | lineage2.2.1 | None | SRR13861144 | Other | lineage4.9 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR6982195 | Sensitive | lineage4.4.1.1 | None | SRR6982227 | Sensitive | lineage4.9 | None | ERR560439 | Other | lineage4.9 | None | SRR5065440 | Other | lineage2.2.1.2 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | SRR13861634 | Other | lineage4.9 | None | SRR6982011 | Sensitive | lineage4.1.1.1 | None | SRR124453 | HR-TB | lineage2.2.2 | None | SRR21711124 | Other | lineage1.1.3 | None | SRR1019127 | Other | lineage4.9 | None | ERR779680 | Sensitive | lineage4.3.4.2.1 | None | SRR13861568 | Other | lineage4.9 | None | ERR6358728 | MDR-TB | lineage4.6.1.2 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR13199746 | Other | La1.7.1 | None | SRR21240064 | Sensitive | lineage4.3.3 | None | SRR13861158 | Other | lineage4.9 | None | SRR13861630 | Other | lineage4.9 | None | SRR13861403 | Other | lineage4.9 | None | SRR13861419 | Other | lineage4.9 | None | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None | SRR13861411 | Other | lineage4.9 | None | ERR1144989 | Sensitive | lineage4.8 | None | ERR9786844 | Other | lineage4.3.4.2 | None | ERR2179695 | Sensitive | lineage4.5 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR13861580 | Other | lineage4.9 | None | SRR13861286 | Other | lineage4.9 | None | SRR13861318 | Other | lineage4.9 | None | SRR6896340 | Sensitive | lineage4.4.1.1 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR6982077 | Sensitive | lineage4.3.2.1 | None | ERR1679639 | Other | lineage4.6.4 | None | SRR13861627 | Other | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR11972420 | MDR-TB | lineage2.2.1 | None | SRR2101617 | Sensitive | lineage4.1.1.1 | None | SRR7443732 | Sensitive | lineage4.9 | None | SRR13861258 | Other | lineage4.9 | None | SRR7755643 | Pre-XDR-TB | lineage4.2.1 | None | ERR6149876 | Other | La1.8.2 | None | SRR13861147 | Other | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861421 | Other | lineage4.9 | None | SRR13861426 | Other | lineage4.9 | None | SRR13861454 | Other | lineage4.9 | None | SRR13861503 | Other | lineage4.9 | None | SRR13861653 | Other | lineage4.9 | None | SRR7443795 | Sensitive | lineage4.9 | None | SRR13861608 | Other | lineage4.9 | None | SRR12420778 | Sensitive | lineage2.2.1 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR2228888 | Other | lineage4.8 | None | SRR13861141 | Other | lineage4.9 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR7443790 | Sensitive | lineage4.9 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR13861727 | Other | lineage4.9 | None | SRR13861372 | Other | lineage4.9 | None | SRR13861720 | Other | lineage4.9 | None | SRR13861447 | Other | lineage4.9 | None | SRR7240449 | Other | La1.8.1 | None | SRR13861324 | Other | lineage4.9 | None | SRR13861482 | Other | lineage4.9 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | SRR13861312 | Other | lineage4.9 | None | SRR13861562 | Other | lineage4.9 | None | ERR6201832 | Other | La1.2 | None | SRR7131123 | Other | lineage4.8 | None | SRR3675491 | Other | lineage4.7 | None | SRR13861281 | Other | lineage4.9 | None | SRR13861514 | Other | lineage4.9 | None | SRR13861586 | Other | lineage4.9 | None | SRR13861142 | Other | lineage4.9 | None | SRR7070369 | Other | lineage1.2.2.2 | None | ERR4818188 | Other | lineage4.1.2.1 | None | SRR13861711 | Other | lineage4.9 | None | SRR6982048 | Sensitive | lineage4.3.2.1 | None | SRR7443754 | Sensitive | lineage4.9 | None | ERR4769429 | Other | lineage4.9 | None | SRR13861573 | Other | lineage4.9 | None | ERR560448 | HR-TB | La1.2.BCG;lineage4.9 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR13861533 | Other | lineage4.9 | None | SRR13861600 | Other | lineage4.9 | None | SRR13861617 | Other | lineage4.9 | None | SRR13861164 | Other | lineage4.9 | None | ERR6201910 | Other | La1.2 | None | SRR7240506 | Other | La1.8.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | ERR6149874 | Other | La1.8.2 | None | ERR6140667 | Other | La1.8.2 | None | ERR037234 | Sensitive | lineage4.9 | None | SRR13861559 | Other | lineage4.9 | None | ERR7801314 | Sensitive | lineage4.3.4.2 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | ERR3283043 | Other | lineage4.9 | None | SRR6045158 | Other | lineage4.9 | None | SRR13861283 | Other | lineage4.9 | None | SRR13861246 | Other | lineage4.9 | None | SRR13861461 | Other | lineage4.9 | None | SRR13861702 | Other | lineage4.9 | None | SRR7443730 | Sensitive | lineage4.9 | None | SRR7443731 | Sensitive | lineage4.9 | None | SRR13861343 | Other | lineage4.9 | None | SRR7443748 | Sensitive | lineage4.9 | None | SRR13861724 | Other | lineage4.9 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR6981939 | Sensitive | lineage4.3.4.2.1 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6982102 | Sensitive | lineage2.2.1 | None | ERR2229336 | Other | lineage4.8 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR13861322 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR13861457 | Other | lineage4.9 | None | SRR13861449 | Other | lineage4.9 | None | SRR13861717 | Other | lineage4.9 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR6045778 | Other | lineage3.1 | None | SRR6855963 | Sensitive | lineage2.2.1 | None | ERR6201843 | Other | La1.2 | None | ERR6201937 | Other | La1.2 | None |
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