EBG00000313325 - n.408G>T
Drug resistance types
170 Sensitive
12 RR-TB
73 HR-TB
40 MDR-TB
33 Pre-XDR-TB
0 XDR-TB
396 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 5 |
| lineage4.9 | 400 |
| lineage2.2.2;lineage4 | 10 |
| lineage2.2.2 | 25 |
| La1.8.2 | 6 |
| lineage2.2.1 | 54 |
| lineage4.5 | 7 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4 | 7 |
| lineage4.4.1.1 | 11 |
| lineage2.2.1.1 | 8 |
| lineage4.8 | 12 |
| lineage3 | 22 |
| lineage4.7 | 2 |
| lineage4.2.1.1 | 3 |
| lineage3.1.1;lineage4.3.2.1 | 1 |
| lineage4.9;lineage5.1.1 | 1 |
| lineage6.2.3 | 1 |
| lineage4.3.4.1 | 2 |
| lineage5.1.1 | 5 |
| lineage4.6.5 | 1 |
| lineage4.6.1.1 | 13 |
| lineage6.1.1 | 2 |
| lineage4.8;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 10 |
| La1.2 | 9 |
| La2;lineage4.9 | 1 |
| lineage1.1.3.2 | 3 |
| lineage4.1.2 | 5 |
| lineage4.1.1.1 | 1 |
| lineage5.1.2 | 2 |
| lineage3.1.1;lineage4.6.1.1 | 2 |
| lineage2.2.1;lineage3 | 1 |
| lineage4.6.1.2 | 3 |
| lineage2.2.1.2 | 1 |
| lineage4.4.1.2 | 3 |
| lineage1.2.1.2.1;lineage4.9 | 1 |
| lineage5.1.4 | 1 |
| lineage3.1.1 | 3 |
| lineage1.1.1 | 1 |
| lineage4.1.2.1 | 9 |
| lineage2.2.1;lineage2.2.2 | 4 |
| lineage2.2;lineage4 | 2 |
| lineage2 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage1.1.2 | 7 |
| La1.8.1 | 2 |
| lineage4.3.2 | 1 |
| La1.4 | 1 |
| lineage4.1.1 | 1 |
| lineage4.2.1 | 5 |
| lineage2;lineage4.9 | 2 |
| lineage4.1.4 | 1 |
| lineage1.2.2.2 | 3 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.2.BCG | 4 |
| lineage4.2.2.2 | 1 |
| lineage6.2.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage1.2.1.2.1 | 3 |
| lineage4.9.1 | 2 |
| lineage4.8.1 | 2 |
| lineage4.6.3 | 1 |
| La1.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage1.1.1.1 | 2 |
| lineage2.2.1;lineage4 | 4 |
| lineage4.3.4.2 | 1 |
| lineage2.2;lineage4.9 | 1 |
| La1.6 | 1 |
| lineage2.2.1.1;lineage4 | 1 |
| lineage4.4.2 | 1 |
| lineage2.2;lineage3 | 1 |
| M.canetti;lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 724 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6785282 | Other | lineage4.3.3 | None | SRR7443732 | Sensitive | lineage4.9 | None | SRR7443751 | Sensitive | lineage4.9 | None | SRR1048886 | HR-TB | lineage2.2.2;lineage4 | None | SRR1049007 | HR-TB | lineage2.2.2 | None | SRR1049735 | Sensitive | lineage4.9 | None | SRR13861258 | Other | lineage4.9 | None | SRR13861274 | Other | lineage4.9 | None | ERR6149876 | Other | La1.8.2 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013621 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048996 | Sensitive | lineage4.5 | None | SRR1140586 | Sensitive | lineage4.9 | None | SRR13861147 | Other | lineage4.9 | None | SRR13861309 | Other | lineage4.9 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR1183277 | Other | lineage4.9 | None | SRR7443776 | Sensitive | lineage4.9 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | SRR11349133 | MDR-TB | lineage4.3.3 | None | SRR1208331 | Other | lineage4.9 | None | SRR5065436 | HR-TB | lineage2.2.1 | None | SRR13861256 | Other | lineage4.9 | None | SRR13861495 | HR-TB | lineage4.9 | None | ERR176718 | Sensitive | lineage2.2.1 | None | SRR16100231 | Sensitive | lineage4 | None | SRR13861443 | Other | lineage4.9 | None | SRR1049629 | MDR-TB | lineage4.4.1.1 | None | SRR13861374 | Other | lineage4.9 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | ERR4815777 | Other | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR5341375 | Other | lineage4.9 | None | SRR11342680 | Other | lineage4.8 | None | SRR21728339 | Other | lineage3 | None | SRR6152979 | Other | lineage4.7 | None | SRR6397638 | Other | lineage4.2.1.1 | None | ERR245795 | Sensitive | lineage3.1.1;lineage4.3.2.1 | None | SRR7443794 | Sensitive | lineage4.9 | None | ERR1082121 | Sensitive | lineage4.9;lineage5.1.1 | None | ERR10796630 | Other | lineage6.2.3 | None | SRR6397721 | Other | lineage4.2.1.1 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | SRR13861217 | Other | lineage4.9 | None | ERR4818444 | Other | lineage4.6.5 | None | SRR13861727 | Other | lineage4.9 | None | SRR6407487 | Other | lineage4.9 | None | SRR13861673 | Other | lineage4.9 | None | SRR1140627 | Sensitive | lineage4.6.1.1 | None | SRR13861187 | Other | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR13861307 | Other | lineage4.9 | None | SRR13861463 | Other | lineage4.9 | None | SRR13861372 | Other | lineage4.9 | None | SRR1174277 | HR-TB | lineage2.2.1 | None | ERR6149870 | Other | La1.8.2 | None | SRR6153042 | Other | lineage4.4.1.1 | None | SRR1183057 | Other | lineage4.9 | None | SRR13861648 | Other | lineage4.9 | None | SRR7443762 | Sensitive | lineage4.9 | None | SRR13861373 | Other | lineage4.9 | None | SRR7443725 | Sensitive | lineage4.9 | None | ERR1023250 | Sensitive | lineage6.1.1 | None | SRR1049030 | Sensitive | lineage4.9 | None | SRR1049736 | Sensitive | lineage4.9 | None | SRR13861227 | Other | lineage4.9 | None | SRR13861230 | Other | lineage4.9 | None | SRR13861231 | Other | lineage4.9 | None | SRR13861566 | Other | lineage4.9 | None | SRR7443753 | Sensitive | lineage4.9 | None | ERR2228874 | Other | lineage4.8;lineage4.9 | None | SRR1180241 | Other | lineage4.9 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR6201832 | Other | La1.2 | None | SAMN02381037 | MDR-TB | lineage4.6.1.1 | None | SRR13861593 | Other | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR6198389 | Other | La1.2 | None | ERR181750 | Sensitive | lineage1.1.3.2 | None | ERR2517457 | Sensitive | lineage3 | None | SRR13861188 | Other | lineage4.9 | None | SRR13861264 | HR-TB | lineage4.9 | None | SRR13861345 | Other | lineage4.9 | None | SRR13861468 | Other | lineage4.9 | None | SRR13861519 | Other | lineage4.9 | None | SRR13861522 | Other | lineage4.9 | None | SRR13861486 | Other | lineage4.9 | None | SRR1062927 | MDR-TB | lineage4.6.1.1 | None | SRR13861422 | Other | lineage4.9 | None | ERR3275548 | Sensitive | lineage3 | nl | SRR13861328 | Other | lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR5341312 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831798 | HR-TB | lineage2.2.1 | vn | SRR1013528 | Pre-XDR-TB | lineage2.2.2;lineage4 | None | SRR13861263 | Other | lineage4.9 | None | SRR13861631 | Other | lineage4.9 | None | ERR10796623 | Other | lineage4.1.1.1 | None | SRR13861331 | Other | lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR13861598 | Other | lineage4.9 | None | SRR1049743 | Sensitive | lineage4.6.1.1 | None | SRR1173706 | Other | lineage4.9 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR13861348 | Other | lineage4.9 | None | SRR1049630 | MDR-TB | lineage4.4.1.1 | None | SRR1175025 | Sensitive | lineage2.2.1 | None | SRR1183404 | Other | lineage4.9 | None | ERR4831839 | MDR-TB | lineage2.2.1 | None | SRR1183678 | Other | lineage4.9 | None | SRR13861418 | Other | lineage4.9 | None | SRR1181268 | Other | lineage4.9 | None | SRR13861280 | Other | lineage4.9 | None | SRR6046152 | Other | lineage4.9 | None | SRR13861579 | Other | lineage4.9 | None | SRR13861523 | Other | lineage4.9 | None | ERR6338285 | Other | La1.2 | None | SRR1048982 | HR-TB | lineage2.2.1.1 | None | SRR7443752 | Sensitive | lineage4.9 | None | ERR751339 | Sensitive | lineage5.1.2 | None | SRR1049724 | MDR-TB | lineage4.6.1.1 | None | SRR6397770 | Other | lineage4.7 | None | ERR7801177 | Other | lineage4.3.4.2.1 | None | SRR7443722 | Sensitive | lineage4.9 | None | SRR13861567 | Other | lineage4.9 | None | SAMN02360585 | HR-TB | lineage4.5 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1181193 | Other | lineage4.9 | None | SRR1182885 | Other | lineage4.9 | None | SRR1208542 | Other | lineage4.9 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1173293 | Other | lineage3.1.1;lineage4.6.1.1 | None | SRR1173800 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR1180758 | Sensitive | lineage4.9 | None | SRR13861362 | Other | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861421 | Other | lineage4.9 | None | SRR13861426 | Other | lineage4.9 | None | SRR13861454 | Other | lineage4.9 | None | SRR13861465 | Other | lineage4.9 | None | SRR13861521 | Other | lineage4.9 | None | SRR13861537 | Other | lineage4.9 | None | SRR13861653 | Other | lineage4.9 | None | SRR13861265 | HR-TB | lineage4.9 | None | SRR13861554 | Other | lineage4.9 | None | SRR13861608 | Other | lineage4.9 | None | SRR13861680 | Other | lineage4.9 | None | SRR1049752 | RR-TB | lineage4.6.1.2 | None | ERR773804 | Sensitive | lineage4.9 | None | SRR7444101 | Sensitive | lineage4.9 | None | SRR7453031 | Sensitive | lineage2.2.1.2 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | ERR6201843 | Other | La1.2 | None | SRR1048980 | HR-TB | lineage3 | None | ERR4815985 | Other | lineage5.1.2 | None | SRR13861282 | Other | lineage4.9 | None | SRR13861325 | Other | lineage4.9 | None | SRR13861336 | Other | lineage4.9 | None | SRR13861384 | Other | lineage4.9 | None | SRR13861387 | Other | lineage4.9 | None | SRR13861476 | Other | lineage4.9 | None | SRR13861415 | Other | lineage4.9 | None | SRR13861607 | Other | lineage4.9 | None | ERR1034791 | RR-TB | lineage4.9 | None | SRR13861725 | Other | lineage4.9 | None | SRR13861668 | Other | lineage4.9 | None | SRR13861240 | Other | lineage4.9 | None | SRR13861314 | Other | lineage4.9 | None | SRR13861420 | Other | lineage4.9 | None | ERR4769512 | Sensitive | lineage4.9 | None | SRR1013609 | Sensitive | lineage4 | None | SRR1013611 | Sensitive | lineage4.5 | None | ERR161045 | Sensitive | lineage4.3.4.2.1 | None | ERR190388 | Sensitive | lineage4.9 | None | ERR736825 | Sensitive | lineage4.9 | None | SRR1048867 | Pre-XDR-TB | lineage2.2.2 | None | SRR1173705 | Other | lineage4.9 | None | SRR1202410 | Other | lineage4.9 | None | SRR1180666 | Other | lineage4.9 | None | SRR1202612 | Sensitive | lineage4.9 | None | SRR13861141 | Other | lineage4.9 | None | DRR184644 | HR-TB | lineage2.2.1 | None | SRR7443739 | Sensitive | lineage4.9 | None | SRR7443768 | Sensitive | lineage4.9 | None | SRR7443790 | Sensitive | lineage4.9 | None | SRR13861714 | Other | lineage4.9 | None | SRR1173686 | MDR-TB | lineage3 | None | SRR6153036 | Other | lineage1.2.1.2.1;lineage4.9 | None | ERR1140797 | Sensitive | lineage5.1.4 | None | SRR13861390 | Other | lineage4.9 | None | SRR13861232 | Other | lineage4.9 | None | SRR13861156 | Other | lineage4.9 | None | SRR13861206 | Other | lineage4.9 | None | SRR1013597 | Sensitive | lineage2.2.2;lineage4 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR1183276 | Other | lineage4.9 | None | SRR7444074 | Sensitive | lineage4.9 | None | SRR1013527 | Other | lineage2.2.1 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR1180062 | Other | lineage4.9 | None | SRR13861459 | HR-TB | lineage4.9 | None | SRR13861180 | Other | lineage4.9 | None | SRR13861720 | Other | lineage4.9 | None | SRR1238559 | Other | lineage4.9 | None | SRR13861531 | Other | lineage4.9 | None | SRR1013577 | HR-TB | lineage2.2.2 | None | SRR1183321 | Other | lineage4.9 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | SRR1013622 | Pre-XDR-TB | lineage2.2.2 | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR1173719 | Other | lineage4.9 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR13861353 | Other | lineage4.9 | None | SRR1183307 | Other | lineage4.9 | None | SRR7443785 | Sensitive | lineage4.9 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SRR1183680 | Other | lineage4.9 | None | SRR17567930 | Sensitive | lineage4.4.1.1 | None | SRR1013612 | Sensitive | lineage4.5 | None | ERR1140790 | Sensitive | lineage2.2.1 | None | SRR7443733 | Sensitive | lineage4.9 | None | SRR1013596 | Sensitive | lineage3 | None | SRR13861651 | Other | lineage4.9 | None | ERR216901 | Other | lineage3.1.1 | None | ERR3470682 | Other | lineage3 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | SRR1049622 | MDR-TB | lineage4.4.1.1 | None | SRR1183015 | Other | lineage4.9 | None | SRR13861587 | Other | lineage4.9 | None | SRR1173421 | Other | lineage4.9 | None | SRR13861683 | Other | lineage4.9 | None | ERR751317 | Sensitive | lineage4.9 | None | SRR1196582 | Other | lineage4.9 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | SRR13861142 | Other | lineage4.9 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | SRR13861379 | Other | lineage4.9 | None | ERR718268 | Sensitive | lineage1.1.1 | None | SRR1182883 | Other | lineage4.9 | None | SRR13861175 | Other | lineage4.9 | None | ERR176771 | Sensitive | lineage4.3.4.2.1 | None | ERR6201814 | Other | La1.2 | None | SRR1013568 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013553 | MDR-TB | lineage2.2.2 | None | SRR11349188 | MDR-TB | lineage4.1.2.1 | None | ERR192070 | Sensitive | lineage4.9 | None | SRR1173384 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR13861174 | Other | lineage4.9 | None | SAMN02360571 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1048885 | HR-TB | lineage2.2;lineage4 | None | ERR1140767 | Sensitive | lineage6.1.1 | None | SRR1181223 | Other | lineage4.9 | None | SRR1173768 | Sensitive | lineage4.9 | None | SRR7131160 | Sensitive | lineage3 | None | SRR1180111 | Other | lineage4.9 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR1180091 | Other | lineage4.9 | None | SRR13861157 | Other | lineage4.9 | None | SRR1013607 | HR-TB | lineage2.2.2 | None | SRR1049040 | HR-TB | lineage2 | None | SRR1013613 | Sensitive | lineage2.2.1 | None | SRR1208508 | Other | lineage4.9 | None | SRR1183712 | Other | lineage4.9 | None | SRR13861243 | Other | lineage4.9 | None | SRR13861654 | Other | lineage4.9 | None | ERR323068 | Sensitive | lineage4.9 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR10869260 | Pre-XDR-TB | lineage2.2.2 | None | ERR6201800 | Other | La1.2 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | SRR1062937 | Sensitive | lineage4.6.1.1 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | SRR1208712 | Other | lineage4.9 | None | SRR13861254 | Other | lineage4.9 | None | SRR7443737 | Sensitive | lineage4.9 | None | SRR13861394 | Other | lineage4.9 | None | SRR13861389 | Other | lineage4.9 | None | SRR1183435 | Other | lineage4.9 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02598978 | Other | lineage1.1.2 | None | SRR1181591 | Sensitive | lineage4.9 | None | SRR7443747 | Sensitive | lineage4.9 | None | SRR7444103 | Sensitive | lineage4.9 | None | ERR2229336 | Other | lineage4.8 | None | ERR3283009 | Other | La1.8.1 | None | SRR1048965 | HR-TB | lineage2.2.1 | None | SRR13591376 | Sensitive | lineage4.3.2 | None | SRR13861297 | Other | lineage4.9 | None | SRR13861481 | Other | lineage4.9 | None | SRR13861464 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR16278292 | Other | La1.4 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR1049744 | Sensitive | lineage4.6.1.1 | None | SRR7443724 | Sensitive | lineage4.9 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR1180025 | Other | lineage4.9 | None | SRR7443727 | Sensitive | lineage4.9 | None | SRR6397588 | Other | lineage2.2.1 | None | SRR6397727 | Other | lineage4.2.1.1 | None | SRR13861330 | Other | lineage4.9 | None | SRR13861457 | Other | lineage4.9 | None | SRR13861449 | Other | lineage4.9 | None | SRR13861569 | Other | lineage4.9 | None | SRR13861717 | Other | lineage4.9 | None | SRR6152854 | Other | lineage4.1.2.1 | None | SRR6397406 | Other | lineage4.1.2.1 | None | SRR6397568 | Other | lineage4.1.1 | None | ERR2228888 | Other | lineage4.8 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SAMN02360577 | HR-TB | lineage3 | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR1173014 | MDR-TB | lineage3 | None | SRR1183524 | Other | lineage4.9 | None | SRR13861637 | Other | lineage4.9 | None | SRR1183100 | MDR-TB | lineage4.2.1 | None | SRR13861392 | Other | lineage4.9 | None | SRR13861303 | Other | lineage4.9 | None | SRR13861440 | Other | lineage4.9 | None | SRR13861369 | Other | lineage4.9 | None | ERR2446544 | Sensitive | lineage3 | nl | SAMN02381005 | Sensitive | lineage4.6.1.1 | None | SRR7443736 | Sensitive | lineage4.9 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | ERR11464998 | Sensitive | lineage4.8 | None | SRR7443757 | Sensitive | lineage4.9 | None | ERR2229033 | Other | lineage4.8 | None | SRR13861626 | Other | lineage4.9 | None | SRR1011489 | Sensitive | lineage2.2.1.1 | None | SRR1048991 | HR-TB | lineage2;lineage4.9 | None | SRR1172949 | Sensitive | lineage1.1.2 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR3324351 | HR-TB | lineage4.1.4 | None | SRR13861597 | Other | lineage4.9 | None | SAMN02599068 | Sensitive | lineage1.2.2.2 | None | SRR1140723 | Sensitive | lineage4.6.1.1 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | ERR6362858 | Pre-XDR-TB | lineage2.2.2 | None | SRR13861447 | Other | lineage4.9 | None | SRR13861453 | Other | lineage4.9 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR1181397 | Sensitive | lineage4.9 | None | SRR1013598 | Sensitive | lineage2.2.2;lineage4 | None | ERR751329 | Sensitive | lineage5.1.1 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | SRR19612366 | Other | lineage4.5 | None | SRR1173566 | Other | lineage1.1.2 | None | SRR1183502 | Other | lineage4.9 | None | ERR751414 | MDR-TB | lineage4 | None | SRR13861324 | Other | lineage4.9 | None | SRR1183665 | Other | lineage4.9 | None | SRR13861482 | Other | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | SRR7443743 | Sensitive | lineage4.9 | None | SRR13861438 | Other | lineage4.9 | None | SRR13861143 | RR-TB | lineage4.9 | None | SRR13861195 | Other | lineage4.9 | None | SRR13861312 | Other | lineage4.9 | None | SRR13861562 | Other | lineage4.9 | None | SRR13861572 | Other | lineage4.9 | None | SRR6397585 | Other | lineage4.4.1.2 | None | SRR6152986 | Other | lineage2.2.1 | None | ERR3283015 | Sensitive | lineage4.9 | None | SRR1048994 | HR-TB | lineage4.9 | None | ERR1063890 | Sensitive | lineage3.1.1 | None | SRR1183304 | Other | lineage4.9 | None | SRR7131220 | Other | lineage4.1.2.1 | None | SAMN02599073 | Sensitive | lineage2.2.1 | None | SRR7086716 | HR-TB | La1.2.BCG | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR13861383 | Other | lineage4.9 | None | ERR751332 | Sensitive | lineage6.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR10869241 | Pre-XDR-TB | lineage2.2.1 | None | SRR13861186 | Other | lineage4.9 | None | ERR473279 | Other | lineage4.9 | None | SRR1181574 | Sensitive | lineage4.9 | None | SRR1183212 | Other | lineage4.9 | None | SRR6397551 | Other | lineage4.1.1.3 | None | SRR13861281 | Other | lineage4.9 | None | SRR13861514 | Other | lineage4.9 | None | SRR13861586 | Other | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | SRR13861294 | Other | lineage4.9 | None | ERR164004 | Sensitive | lineage4.9 | None | ERR4815278 | Other | lineage4.8 | None | SRR13861583 | Other | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | SRR13861544 | Other | lineage4.9 | None | SRR13861535 | Other | lineage4.9 | None | SRR13861487 | Other | lineage4.9 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173865 | Sensitive | lineage4.9 | None | SRR13861450 | Other | lineage4.9 | None | SRR13861417 | HR-TB | lineage4.9 | None | SAMN02381051 | RR-TB | lineage4.6.1.2 | None | ERR4423724 | RR-TB | lineage3 | None | ERR192071 | Other | La1.8.1 | None | SRR13861498 | Other | lineage4.9 | None | SRR13861534 | Other | lineage4.9 | None | SRR15368973 | Other | lineage4.9 | None | ERR751338 | Other | lineage5.1.1 | None | ERR6201802 | Other | La1.2 | None | SAMN02567685 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR19576436 | Sensitive | lineage1.2.2.2 | None | SRR1013583 | Sensitive | lineage2.2.2 | None | SRR7443750 | Sensitive | lineage4.9 | None | SRR1183097 | Other | lineage4.9 | None | SRR13861497 | HR-TB | lineage4.9 | None | SRR13861532 | Other | lineage4.9 | None | SRR13861692 | Other | lineage4.9 | None | SRR6397396 | HR-TB | lineage1.2.1.2.1 | None | SRR1208230 | Other | lineage4.9 | None | SRR1048869 | HR-TB | lineage2.2.1;lineage2.2.2 | None | ERR4769429 | Other | lineage4.9 | None | SRR13861573 | Other | lineage4.9 | None | SAMN02599089 | MDR-TB | lineage3 | None | ERR4769518 | Sensitive | lineage4.9 | None | SRR13861504 | Other | lineage4.9 | None | SRR13861144 | Other | lineage4.9 | None | SAMN02628479 | MDR-TB | lineage4.2.1 | ir | SRR1208808 | Other | lineage4.9 | None | SRR13861533 | Other | lineage4.9 | None | SRR13861600 | Other | lineage4.9 | None | SRR13861617 | Other | lineage4.9 | None | SRR1013584 | HR-TB | lineage2.2.2 | None | SRR13861406 | Other | lineage4.9 | None | SRR1062933 | Sensitive | lineage4.9 | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR13861161 | Other | lineage4.9 | None | SRR1013608 | Sensitive | lineage2.2.2 | None | SRR1141261 | Sensitive | lineage4.9 | None | ERR1023527 | Other | lineage4.9.1 | None | ERR2446382 | Other | lineage4 | None | SRR11342675 | Pre-XDR-TB | lineage4.8.1 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | SRR21764250 | Other | lineage4.9 | None | SRR6397575 | Other | lineage4.3.4.2.1 | None | SRR1173343 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342667 | MDR-TB | lineage4.3.3 | None | SRR7086711 | HR-TB | La1.2.BCG | None | SRR7443734 | Sensitive | lineage4.9 | None | SRR1048870 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR13861728 | Other | lineage4.9 | None | ERR2229358 | Other | lineage4.8 | None | SRR1013581 | Pre-XDR-TB | lineage2.2.1 | None | SRR13861694 | Other | lineage4.9 | None | ERR3797074 | Sensitive | lineage4.9 | None | SRR1915484 | Other | La1.2.BCG | None | SRR1182976 | Other | lineage4.9 | None | ERR4769479 | Other | La1.3 | None | SRR1180243 | MDR-TB | lineage4.2.1 | None | SRR13861649 | Other | lineage4.9 | None | SRR11349134 | Pre-XDR-TB | lineage4.8.1 | None | SRR1013600 | Sensitive | lineage2.2.1.1 | None | SRR7443738 | Sensitive | lineage4.9 | None | SRR13861278 | Other | lineage4.9 | None | SRR1048853 | HR-TB | lineage2;lineage4.9 | None | SRR13861158 | Other | lineage4.9 | None | SRR6982088 | Other | lineage4.1.1.2 | None | SRR13861191 | Other | lineage4.9 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | SRR1049723 | MDR-TB | lineage4.6.1.1 | None | ERR10796553 | Other | lineage4.9 | None | SRR1106670 | Sensitive | lineage4.9 | None | SRR1144759 | HR-TB | lineage2.2.2;lineage4 | None | SRR13861702 | Other | lineage4.9 | None | SRR13861494 | Other | lineage4.9 | None | SRR1180672 | Other | lineage4.9 | None | SRR1183282 | Other | lineage4.9 | None | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | SRR13861318 | Other | lineage4.9 | None | SRR1238557 | Other | lineage4.9 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | SRR13861410 | Other | lineage4.9 | None | SRR1048966 | MDR-TB | lineage2.2.1 | None | SRR13861589 | Other | lineage4.9 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | ERR987733 | Other | lineage4.6.1.1 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1181577 | Other | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | SAMN02381009 | MDR-TB | lineage4.4.1.1 | None | SRR13861734 | Other | lineage4.9 | None | SRR13861470 | Other | lineage4.9 | None | ERR6149874 | Other | La1.8.2 | None | SRR7131185 | Other | lineage4.1.2.1 | None | ERR972801 | RR-TB | lineage2.2.1.1 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR13861248 | Other | lineage4.9 | None | SRR1182953 | Other | lineage4.9 | None | SRR1183018 | Other | lineage4.9 | None | SRR7443761 | Sensitive | lineage4.9 | None | SRR13861446 | Other | lineage4.9 | None | SRR13861530 | Other | lineage4.9 | None | SRR1013637 | Sensitive | lineage2.2.2;lineage4 | None | SRR6832507 | Other | lineage4.8 | None | SRR13861706 | Other | lineage4.9 | None | ERR216928 | Other | lineage4.9.1 | None | ERR751336 | Sensitive | lineage5.1.1 | None | SRR1013531 | Sensitive | lineage4.9 | None | ERR3797024 | Sensitive | lineage4.9 | None | SRR6855896 | Other | lineage4.3.4.2.1 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | SRR6397642 | Other | lineage4.4.1.1 | None | SRR6397771 | Other | lineage1.1.1.1 | None | SRR13861293 | Other | lineage4.9 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1181587 | Other | lineage4.9 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1013636 | Sensitive | lineage2.2.2;lineage4 | None | SRR1173105 | MDR-TB | lineage3 | None | SRR1062902 | MDR-TB | lineage4.4.1.1 | None | SRR13861462 | Other | lineage4.9 | None | SRR1173799 | Sensitive | lineage3.1.1;lineage4.6.1.1 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR1183080 | Other | lineage4.9 | None | ERR5758436 | Other | lineage2.2.2 | None | SRR13861236 | Other | lineage4.9 | None | SRR13861244 | Other | lineage4.9 | None | SRR13861246 | Other | lineage4.9 | None | SRR13861452 | Other | lineage4.9 | None | SRR13861429 | Other | lineage4.9 | None | SRR13861329 | Other | lineage4.9 | None | SRR1062895 | Sensitive | lineage4.6.1.1 | None | ERR736850 | Sensitive | lineage4.9 | None | SRR13861639 | Other | lineage4.9 | None | SRR6397441 | Other | lineage4.5 | None | SRR1915485 | Other | La1.2.BCG | None | SRR1183472 | Other | lineage4.9 | None | SRR1184383 | Other | lineage4.9 | None | SRR13861493 | Other | lineage4.9 | None | SRR1202648 | Other | lineage4.9 | None | SRR13861580 | Other | lineage4.9 | None | SRR13861286 | Other | lineage4.9 | None | SRR1011488 | Sensitive | lineage2.2.1 | None | SRR1183354 | Other | lineage4.9 | None | SRR1183395 | Other | lineage4.9 | None | SRR13861179 | Other | lineage4.9 | None | SRR7646014 | MDR-TB | lineage4.2.1 | None | SRR1180106 | Other | lineage4.9 | None | SRR7443723 | Sensitive | lineage4.9 | None | SRR13861669 | Other | lineage4.9 | None | ERR2515447 | Sensitive | lineage2.2.1 | None | SRR5341390 | HR-TB | lineage1.1.2 | None | SRR7443769 | Sensitive | lineage4 | None | SAMN02381012 | MDR-TB | lineage4.4.1.1 | None | SRR7444098 | Sensitive | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR176597 | Other | lineage1.1.2 | mw | SRR13861735 | Other | lineage4.9 | None | SRR1172808 | Other | lineage4.9 | None | ERR4829238 | Sensitive | lineage3 | None | SRR1180696 | Other | lineage4.9 | None | SRR1183200 | Sensitive | lineage4.9 | None | SRR1183485 | Other | lineage4.9 | None | SRR13861323 | Other | lineage4.9 | None | SRR13861162 | Other | lineage4.9 | None | SRR13861192 | Other | lineage4.9 | None | SRR13861400 | Other | lineage4.9 | None | SRR13861479 | Other | lineage4.9 | None | SRR13861545 | Other | lineage4.9 | None | SRR13861627 | Other | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR13861428 | Other | lineage4.9 | None | SRR1013630 | Pre-XDR-TB | lineage2.2.2;lineage4 | None | SRR13861200 | Other | lineage4.9 | None | ERR2228873 | Other | lineage4.8 | None | SRR7443767 | Sensitive | lineage4.9 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR10796619 | Sensitive | lineage4.3.3 | None | ERR4816429 | Other | lineage1.1.2 | None | SRR11342646 | HR-TB | lineage3 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR10315603 | MDR-TB | lineage4.8 | None | SRR1049623 | MDR-TB | lineage4.4.1.1 | None | SRR1049751 | RR-TB | lineage4.6.1.2 | None | SRR1173764 | Sensitive | lineage4.9 | None | SRR1181277 | Other | lineage4.9 | None | SRR1183511 | Other | lineage4.9 | None | SRR13861213 | Other | lineage4.9 | None | SRR13861430 | Other | lineage4.9 | None | SRR13861641 | Other | lineage4.9 | None | SRR13591377 | Sensitive | lineage4.1.1.3 | None | SRR1013614 | Sensitive | lineage2.2.1 | None | SRR13861164 | Other | lineage4.9 | None | SRR13861416 | Other | lineage4.9 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1013617 | Sensitive | lineage2.2.1;lineage4 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | SRR1173269 | Sensitive | lineage4.9 | None | ERR2179737 | HR-TB | lineage4.2.1 | None | SRR1208944 | Other | lineage4.9 | None | SAMN02599130 | MDR-TB | lineage3 | None | SRR1181250 | Other | lineage4.9 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR6201910 | Other | La1.2 | None | SRR1049041 | HR-TB | lineage2.2.1;lineage4 | None | SRR7443726 | Sensitive | lineage4.9 | None | ERR4831837 | MDR-TB | lineage2.2.1 | None | SRR1208901 | Other | lineage4.9 | None | SRR7444102 | Sensitive | lineage4.9 | None | SRR1048986 | HR-TB | lineage2.2.1 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SRR1172861 | MDR-TB | lineage3 | None | SRR1062867 | Sensitive | lineage4.9 | None | SRR1013629 | Pre-XDR-TB | lineage2.2.2 | None | SRR1181377 | Other | lineage4.9 | None | ERR6140667 | Other | La1.8.2 | None | SRR13861634 | Other | lineage4.9 | None | SAMN02599090 | MDR-TB | lineage3 | None | SRR1013578 | HR-TB | lineage2.2.2;lineage4 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR13861267 | Other | lineage4.9 | None | SRR10869085 | Sensitive | lineage2.2.1 | None | SRR7645834 | Other | lineage2.2.1 | None | SRR13861491 | Other | lineage4.9 | None | SRR13861559 | Other | lineage4.9 | None | SRR13861433 | Other | lineage4.9 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | SRR1180019 | Other | lineage4.9 | None | SRR6397548 | HR-TB | lineage1.2.1.2.1 | None | SRR1180803 | Other | lineage4.9 | None | SRR13861568 | Other | lineage4.9 | None | SRR13861219 | Other | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR2446433 | Other | lineage4.1.2.1 | None | ERR2228859 | Other | lineage4.8 | None | SRR1013610 | Sensitive | lineage4 | None | ERR6149875 | Other | La1.8.2 | None | SRR13861397 | HR-TB | lineage4.9 | None | ERR1034692 | Other | lineage1.2.1.2.1 | None | ERR7801314 | Sensitive | lineage4.3.4.2 | None | SRR1013618 | RR-TB | lineage2.2.1;lineage4 | None | SRR1062864 | Sensitive | lineage4.9 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1181392 | Other | lineage4.9 | None | SRR1181505 | Sensitive | lineage4.9 | None | SRR1049026 | HR-TB | lineage2.2;lineage4.9 | None | SRR10614047 | Sensitive | lineage4.9 | None | SRR5341417 | HR-TB | lineage3 | None | SRR1174291 | Other | lineage1.1.2 | None | SRR1062865 | Sensitive | lineage2.2.2 | None | SRR1180519 | Other | lineage4.9 | None | SRR1062898 | MDR-TB | lineage4.3.4.2.1 | None | SRR13861285 | Other | lineage4.9 | None | SRR13861630 | Other | lineage4.9 | None | SRR13861403 | Other | lineage4.9 | None | SRR13861419 | Other | lineage4.9 | None | SRR13861499 | Other | lineage4.9 | None | SRR1173621 | MDR-TB | lineage3 | None | SRR13861283 | Other | lineage4.9 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR6152886 | HR-TB | lineage3 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR13861411 | Other | lineage4.9 | None | ERR473337 | Other | lineage4.1.2 | None | SRR13861461 | Other | lineage4.9 | None | SRR13861268 | Other | lineage4.9 | None | ERR4769470 | Sensitive | lineage4.9 | None | SRR13861299 | Other | lineage4.9 | None | ERR4814573 | Other | lineage1.1.3.2 | None | SRR10993953 | Other | La1.6 | None | ERR1873549 | Pre-XDR-TB | lineage2.2.2 | None | SRR13861696 | Other | lineage4.9 | None | ERR4819430 | Sensitive | lineage4.1.2.1 | None | SRR1183388 | Other | lineage4.9 | None | ERR6201798 | Other | La1.2 | None | SRR13861691 | Other | lineage4.9 | None | ERR6149868 | Other | La1.8.2 | None | SRR1013599 | HR-TB | lineage2.2.1.1;lineage4 | None | SRR7443756 | Sensitive | lineage4.9 | None | SAMN02360562 | Pre-XDR-TB | lineage4.4.2 | None | SRR6982448 | Sensitive | lineage2.2.1;lineage4 | None | SRR7443730 | Sensitive | lineage4.9 | None | SRR1173380 | Pre-XDR-TB | lineage2.2;lineage3 | None | SRR7443749 | Sensitive | lineage4.9 | None | SRR1238558 | Other | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1049006 | HR-TB | lineage2.2.2;lineage4 | None | SRR13861150 | Other | lineage4.9 | None | SRR1175096 | Sensitive | lineage1.2.2.2 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | SRR7443731 | Sensitive | lineage4.9 | None | SRR7444084 | Sensitive | lineage4.9 | None | SRR1173833 | Other | lineage4.9 | None | ERR2027233 | Sensitive | lineage4.1.2.1 | None | SRR13861343 | Other | lineage4.9 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | SAMN02381047 | Sensitive | lineage4.6.1.1 | None | SRR1183360 | Other | lineage4.9 | None | SRR1182928 | Other | lineage4.9 | None | SRR1181189 | Other | lineage4.9 | None | SRR13861718 | Other | lineage4.9 | None | SRR13861724 | Other | lineage4.9 | None | SRR1048992 | HR-TB | lineage2.2;lineage4 | None | SRR1180495 | Other | lineage4.9 | None | SRR1183121 | Other | lineage4.9 | None | SRR6855957 | Sensitive | lineage2.2.1 | None | ERR10796625 | Other | lineage4.4.1.1 | None | ERR2515999 | Sensitive | lineage4.3.4.2.1 | None | ERR323035 | Sensitive | lineage4.9 | None | SRR1048969 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR13591410 | Other | lineage4.9 | None | SRR13861201 | Other | lineage4.9 | None | SRR13861431 | Other | lineage4.9 | None | SRR13861555 | Other | lineage4.9 | None | SRR13861624 | Other | lineage4.9 | None |
|---|
