EBG00000313325 - n.1446G>T
Drug resistance types
100 Sensitive
14 RR-TB
23 HR-TB
22 MDR-TB
1 Pre-XDR-TB
2 XDR-TB
200 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 185 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 3 |
| lineage4.8.2 | 1 |
| lineage4.5 | 1 |
| lineage6.1.1 | 2 |
| La1.6 | 1 |
| lineage4.3.4.2 | 5 |
| lineage4.8 | 5 |
| lineage4.1.1.3 | 3 |
| lineage4.2.2.2 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage2.2.1 | 21 |
| lineage4.3.3 | 4 |
| lineage4.1.2.1;lineage4.9 | 2 |
| lineage3 | 11 |
| lineage4.1.2.1 | 9 |
| lineage4.2.1.1 | 1 |
| La1.2 | 7 |
| lineage4.3.4.2.1 | 8 |
| lineage4 | 3 |
| lineage4.6.2.2 | 2 |
| La1.8.1 | 5 |
| lineage4.4.1.1 | 6 |
| lineage2.2.1.2 | 1 |
| La1.8.2 | 3 |
| lineage4.1.1.1 | 5 |
| lineage2.2.1.1 | 5 |
| La1.7.1 | 3 |
| lineage4.3.2.1 | 8 |
| 4 | |
| lineage5.1.4 | 1 |
| lineage4.1.1.3;lineage4.9 | 3 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| M.canetti;lineage2.2 | 2 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.2 | 2 |
| lineage4.9;lineage9 | 2 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.3.4.1 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage5.1.2 | 1 |
| lineage4.2;lineage4.9 | 2 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.1;lineage4.8 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage2.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.6.5 | 2 |
| La2;lineage4.9 | 1 |
| lineage2.2.2 | 2 |
| lineage3.1.2.2 | 1 |
| lineage3.1.2 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage1.1.3.2 | 1 |
| lineage1.1.3 | 1 |
| lineage4.1.1.2 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage1.1.1;lineage4 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 362 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4811030 | Sensitive | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR7068941 | Other | lineage4.8.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR13861369 | Other | lineage4.9 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR2229033 | Other | lineage4.8 | None | SRR1175496 | Sensitive | lineage4.9 | None | SRR13861180 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR13861438 | Other | lineage4.9 | None | SRR13861143 | RR-TB | lineage4.9 | None | SRR13861562 | Other | lineage4.9 | None | SRR13861566 | Other | lineage4.9 | None | SRR6982398 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR13861281 | Other | lineage4.9 | None | SRR6832359 | Sensitive | lineage2.2.1 | None | SRR13861142 | Other | lineage4.9 | None | SRR21675949 | Other | lineage4.3.3 | None | SRR13861519 | Other | lineage4.9 | None | SRR13861522 | Other | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | SRR13861486 | Other | lineage4.9 | None | SRR6045553 | Other | lineage4.1.2.1;lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7070521 | Other | lineage4.2.1.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR13861175 | Other | lineage4.9 | None | ERR6201802 | Other | La1.2 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR13861631 | Other | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR13861331 | Other | lineage4.9 | None | SRR13861598 | Other | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR6982076 | Sensitive | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR5087846 | Other | La1.8.1 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR5065440 | Other | lineage2.2.1.2 | None | SRR13861567 | Other | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR13861164 | Other | lineage4.9 | None | SRR13861416 | Other | lineage4.9 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR18002948 | Other | lineage2.2.1 | None | ERR6149874 | Other | La1.8.2 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | ERR990545 | Other | lineage3 | None | SRR6982011 | Sensitive | lineage4.1.1.1 | None | SRR13861559 | Other | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR13199746 | Other | La1.7.1 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR10796568 | Other | lineage4.9 | None | SRR13861630 | Other | lineage4.9 | None | SRR13861403 | Other | lineage4.9 | None | SRR13861419 | Other | lineage4.9 | None | SRR13861246 | Other | lineage4.9 | None | SRR13861429 | Other | lineage4.9 | None | SRR13861286 | Other | lineage4.9 | None | SRR23961549 | Other | La1.2 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR13861179 | Other | lineage4.9 | None | SRR12708416 | Sensitive | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR6982077 | Sensitive | lineage4.3.2.1 | None | SRR13861150 | Other | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR2229781 | Other | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR369159 | Sensitive | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173770 | Other | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR2101617 | Sensitive | lineage4.1.1.1 | None | ERR6149876 | Other | La1.8.2 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR13861147 | Other | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861421 | Other | lineage4.9 | None | SRR13861426 | Other | lineage4.9 | None | SRR13861454 | Other | lineage4.9 | None | SRR13861503 | Other | lineage4.9 | None | SRR13861653 | Other | lineage4.9 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR13861457 | Other | lineage4.9 | None | SRR13861449 | Other | lineage4.9 | None | SRR13861717 | Other | lineage4.9 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR6855963 | Sensitive | lineage2.2.1 | None | SRR6856087 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | ERR369162 | Other | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR29097026 | Other | lineage4.9 | None | SRR6982037 | Sensitive | lineage4.1.1.1 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | SRR13861727 | Other | lineage4.9 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR3675522 | Other | lineage4.9 | None | SRR7070315 | Other | lineage4.8 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SRR1792140 | Other | La1.8.1 | None | SRR13861324 | Other | lineage4.9 | None | SRR13861482 | Other | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR13861231 | Other | lineage4.9 | None | SRR13861312 | Other | lineage4.9 | None | ERR6201832 | Other | La1.2 | None | SRR7236253 | Other | La1.7.1 | None | ERR3806453 | Other | lineage4.3.4.2 | None | SRR3675537 | Sensitive | lineage4.9 | None | ERR10796581 | Other | lineage4.1.2 | None | SRR18391772 | Other | La1.7.1 | None | SRR13861188 | Other | lineage4.9 | None | SRR13861264 | HR-TB | lineage4.9 | None | SRR13861345 | Other | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR13861379 | Other | lineage4.9 | None | SRR6982066 | Other | lineage4.3.2.1 | None | SRR13861711 | Other | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR13861497 | HR-TB | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR13861600 | Other | lineage4.9 | None | SRR13861617 | Other | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR7240506 | Other | La1.8.1 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR400538 | RR-TB | lineage5.1.2 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR9786844 | Other | lineage4.3.4.2 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR19303899 | Other | lineage3 | None | SRR13861724 | Other | lineage4.9 | None | SRR13861627 | Other | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR13861428 | Other | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR11972420 | MDR-TB | lineage2.2.1 | None | ERR212001 | HR-TB | None | SRR11349207 | RR-TB | lineage2.2.1 | None | ERR3283008 | Other | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR13861201 | Other | lineage4.9 | None | SRR13861430 | Other | lineage4.9 | None | SRR13861431 | Other | lineage4.9 | None | SRR13861555 | Other | lineage4.9 | None | SRR6981939 | Sensitive | lineage4.3.4.2.1 | None | SRR6982102 | Sensitive | lineage2.2.1 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR2229336 | Other | lineage4.8 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR13861608 | Other | lineage4.9 | None | ERR6201843 | Other | La1.2 | None | ERR10796592 | Other | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR7069314 | Other | lineage3 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR29096410 | Other | lineage4.9 | None | SRR1140716 | Other | lineage3 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR13861495 | HR-TB | lineage4.9 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR13861392 | Other | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR6045036 | Other | lineage4.9 | None | SRR13861714 | Other | lineage4.9 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR13861217 | Other | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR13861372 | Other | lineage4.9 | None | SRR13861720 | Other | lineage4.9 | None | SRR13861531 | Other | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | SRR13861597 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR6149870 | Other | La1.8.2 | None | SRR13861447 | Other | lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR13861353 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR6982328 | Sensitive | lineage3.1.1 | None | SRR7240449 | Other | La1.8.1 | None | SRR11342669 | Other | lineage4.8 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR7240324 | Other | La1.8.1 | None | ERR6198389 | Other | La1.2 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR10796559 | Other | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR13861514 | Other | lineage4.9 | None | SRR13861586 | Other | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | ERR6201814 | Other | La1.2 | None | SRR6982048 | Sensitive | lineage4.3.2.1 | None | SRR18910194 | HR-TB | lineage2.2.2 | None | SRR11349188 | MDR-TB | lineage4.1.2.1 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR363449 | Sensitive | lineage4.9 | None | SRR21714045 | Other | lineage2.2.1 | None | ERR4769429 | Other | lineage4.9 | None | SRR13861573 | Other | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR13861144 | Other | lineage4.9 | None | SAMEA2533358 | MDR-TB | lineage4.1.1.3 | None | SRR1175508 | Sensitive | lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR4798504 | RR-TB | lineage3 | None | SRR6982227 | Sensitive | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR3675260 | Sensitive | lineage4.9 | None | SRR6046177 | Other | lineage3.1.2 | None | ERR6201910 | Other | La1.2 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR13861634 | Other | lineage4.9 | None | SRR2101663 | Sensitive | lineage1.1.3.2 | None | SRR21711124 | Other | lineage1.1.3 | None | SRR13861219 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | ERR363502 | Other | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR7801314 | Sensitive | lineage4.3.4.2 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR13861158 | Other | lineage4.9 | None | SRR6982088 | Other | lineage4.1.1.2 | None | SRR13861283 | Other | lineage4.9 | None | SRR21728710 | Other | lineage4.1.1.3 | None | ERR363447 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | SRR13861411 | Other | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR13861461 | Other | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | SRR13861580 | Other | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR13861702 | Other | lineage4.9 | None | SRR7069074 | Other | lineage3 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR13861318 | Other | lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR3675542 | Other | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR13861343 | Other | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR7131275 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR987722 | MDR-TB | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR13861258 | Other | lineage4.9 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR17832802 | HR-TB | lineage3 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR13861384 | Other | lineage4.9 | None | SRR13861415 | Other | lineage4.9 | None | SRR13861725 | Other | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR6982075 | Sensitive | lineage4.9 | None | SRR13861141 | Other | lineage4.9 | None | ERR12015084 | Other | lineage4.8 | None | SRR13861443 | Other | lineage4.9 | None | SRR13861303 | Other | lineage4.9 | None |
|---|
