EBG00000313325 - n.662C>G
Drug resistance types
105 Sensitive
23 RR-TB
33 HR-TB
74 MDR-TB
27 Pre-XDR-TB
2 XDR-TB
434 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 105 |
| lineage4.8 | 37 |
| lineage4.9 | 207 |
| lineage3.1.1 | 9 |
| lineage4 | 3 |
| lineage3 | 35 |
| lineage4.1.1.1 | 9 |
| La1.8.1 | 7 |
| lineage1.2.2.2 | 8 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage4.1.2.1 | 32 |
| lineage4.8.2 | 2 |
| lineage4.1.2 | 9 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage3.1.3 | 1 |
| lineage2.2.2 | 8 |
| lineage4.3.4.2.1 | 6 |
| La1.2 | 6 |
| lineage4.3.2.1 | 5 |
| lineage1.1.3.2 | 2 |
| lineage4.4.1.1 | 16 |
| lineage3.1.2.2 | 5 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.6 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage1.2.1.2.1 | 4 |
| lineage4.3.3 | 23 |
| lineage4.4.1.1.1 | 9 |
| lineage4.2.2 | 7 |
| lineage4.3.2.1;lineage4.9 | 1 |
| lineage4.8.1 | 5 |
| La1.8.2 | 2 |
| lineage4.4.2 | 3 |
| lineage4.5 | 6 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.7 | 6 |
| lineage4.1.1.3 | 12 |
| lineage2.2.1.1 | 3 |
| lineage4.6.2.2 | 5 |
| La1.2.BCG | 1 |
| lineage3.1.2 | 4 |
| lineage1.1.3.1 | 1 |
| lineage4.2.1 | 3 |
| lineage4.3 | 1 |
| lineage4.1.3 | 1 |
| lineage4.3.4.2 | 8 |
| lineage4.6.2 | 2 |
| La1.3 | 2 |
| 2 | |
| lineage4.2.1.1 | 1 |
| lineage4.6.1.1 | 2 |
| lineage4.3.4.1 | 6 |
| lineage4.2.2.2 | 5 |
| lineage4.3;lineage4.9 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.6.5 | 1 |
| lineage6.1.1 | 3 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage1.1.2 | 3 |
| lineage4.2.1.1;lineage4.8 | 1 |
| lineage1.1.1.1 | 2 |
| lineage4.3.2 | 1 |
| lineage5.1.1 | 3 |
| lineage2.2.1.2 | 1 |
| lineage4.1.1.3.1 | 4 |
| La1.7;lineage4.9 | 1 |
| lineage4.9.1 | 1 |
| lineage6.1.2 | 1 |
| lineage3;lineage4 | 1 |
| lineage6.1.3 | 2 |
| lineage1.1.1 | 1 |
| lineage1.2.1.1 | 2 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.9;lineage5.1.1 | 1 |
| lineage6.2.3 | 1 |
| La1.7.1 | 1 |
| lineage6.3.2 | 1 |
| lineage4.1.1 | 1 |
| lineage3;lineage4.2.2.2 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| La2 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage3.1.2.1 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.4 | 1 |
| lineage3.1 | 1 |
| lineage3.1.1;lineage4 | 1 |
| lineage2.2.2;lineage4.9 | 1 |
| lineage4.3.1.1 | 1 |
| La1.7;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 698 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18003038 | Other | lineage2.2.1 | None | ERR2514943 | Sensitive | lineage4.8 | gb | SRR13861281 | Other | lineage4.9 | None | SRR13861514 | Other | lineage4.9 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR161125 | Sensitive | lineage4 | None | ERR867555 | Other | lineage3 | None | SRR16295830 | Other | lineage2.2.1 | None | SRR10869292 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR4627392 | Other | La1.8.1 | None | SRR13861142 | Other | lineage4.9 | None | SRR7070369 | Other | lineage1.2.2.2 | None | ERR1873555 | Pre-XDR-TB | lineage2.2.1 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | ERR4863405 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR13861487 | Other | lineage4.9 | None | ERR3275866 | Other | lineage4.1.2.1 | nl | SRR6045267 | RR-TB | lineage4.8 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4769506 | Sensitive | lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR7069013 | Other | lineage4.8 | None | SRR6045553 | Other | lineage4.1.2.1;lineage4.9 | None | SRR13861498 | Other | lineage4.9 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | ERR1873401 | MDR-TB | lineage2.2.2 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR176771 | Sensitive | lineage4.3.4.2.1 | None | ERR6201814 | Other | La1.2 | None | SRR6982048 | Sensitive | lineage4.3.2.1 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR16295750 | Other | lineage2.2.1 | None | ERR473346 | Other | lineage1.1.3.2 | None | ERR4769525 | Sensitive | lineage4.9 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR13861497 | HR-TB | lineage4.9 | None | ERR2513904 | Other | lineage3.1.2.2 | gb | SRR6982076 | Sensitive | lineage4.9 | None | SRR16295754 | Other | lineage2.2.1 | None | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR9117704 | Other | lineage4.6 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR13861157 | Other | lineage4.9 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR245801 | Other | lineage4.3.4.2.1 | None | ERR4769518 | Sensitive | lineage4.9 | None | SRR13861144 | Other | lineage4.9 | None | SRR7069128 | Other | lineage1.2.1.2.1 | None | SRR11349209 | MDR-TB | lineage4.1.2.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | ERR4815917 | Other | lineage2.2.1 | gb | SRR1172753 | MDR-TB | lineage4.4.1.1.1 | None | ERR3559283 | HR-TB | lineage4.2.2 | None | SRR6046246 | Other | lineage3 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR13861600 | Other | lineage4.9 | None | SRR13861617 | Other | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172816 | MDR-TB | lineage4.3.3 | None | ERR2513296 | Sensitive | lineage4.1.2.1 | gb | ERR3324362 | HR-TB | lineage4.1.2.1 | None | SRR6982035 | Sensitive | lineage4.3.2.1;lineage4.9 | None | SRR6046764 | Other | lineage4.2.2 | None | SRR7070087 | Other | lineage4.8.1 | None | ERR6149874 | Other | La1.8.2 | None | SRR11342643 | MDR-TB | lineage4.1.1.1 | None | ERR1063847 | Sensitive | lineage3.1.1 | None | ERR736816 | Other | lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR13861446 | Other | lineage4.9 | None | SRR13861634 | Other | lineage4.9 | None | SRR20969951 | Other | lineage4.4.2 | None | SRR7069319 | Other | lineage4.5 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR7069981 | Other | lineage3 | None | SRR13861694 | Other | lineage4.9 | None | ERR4800095 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR11349195 | MDR-TB | lineage4.4.1.1 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | ERR987757 | MDR-TB | lineage4.6.1.2 | None | SRR6045295 | Other | lineage4.7 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR7069216 | Other | lineage4.1.2.1 | None | ERR2509885 | Other | lineage3 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | ERR5865119 | MDR-TB | lineage2.2.1 | None | SRR7070154 | Other | lineage4.4.1.1 | None | SRR18003052 | Other | lineage2.2.1.1 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR13861461 | Other | lineage4.9 | None | SRR13861268 | Other | lineage4.9 | None | SAMN02053762 | MDR-TB | lineage4.1.1.1 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR1203071 | Sensitive | lineage4.8 | None | SRR13861639 | Other | lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | SRR13861696 | Other | lineage4.9 | None | SRR6398035 | Other | lineage4.3.3 | ca | SRR7069005 | Other | lineage3.1.2 | None | SRR13861286 | Other | lineage4.9 | None | ERR4816993 | Other | lineage4.3.4.2.1 | None | SRR10808722 | Sensitive | lineage4.8 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | SRR7069074 | Other | lineage3 | None | SRR16295782 | Other | lineage2.2.1 | None | SRR7069258 | HR-TB | lineage3 | None | SRR6855917 | Sensitive | lineage4.8 | None | SRR6982077 | Sensitive | lineage4.3.2.1 | None | SRR7070515 | Other | lineage1.1.3.1 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR867573 | Other | lineage4.9 | None | ERR5864322 | MDR-TB | lineage4.2.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR4819332 | Other | lineage3 | gb | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4817822 | Other | lineage4.6 | None | SRR13861343 | Other | lineage4.9 | None | ERR4819630 | Other | lineage4.8 | gb | SRR13861735 | Other | lineage4.9 | None | SRR13861323 | Other | lineage4.9 | None | SRR13861410 | Other | lineage4.9 | None | ERR4821761 | Other | lineage3 | gb | SRR1173521 | Other | lineage4.9 | None | SRR6046291 | Other | lineage3 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR6896535 | Other | lineage4.1.1.3 | None | SRR6982102 | Sensitive | lineage2.2.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342692 | MDR-TB | lineage2.2.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR16295758 | Other | lineage2.2.1 | None | SRR16295809 | Other | lineage2.2.1 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR6045726 | Other | lineage3 | None | ERR2514803 | Sensitive | lineage4.6.2 | gb | ERR4769546 | Other | La1.3 | None | ERR502489 | Sensitive | lineage4.9 | None | SRR19303907 | Other | lineage4.8 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR6824624 | Sensitive | lineage2.2.1 | None | ERR4188255 | Sensitive | lineage4.9 | None | SRR833150 | MDR-TB | lineage4.1.1.1 | None | SRR12882768 | RR-TB | lineage3.1.1 | None | SRR13861586 | Other | lineage4.9 | None | ERR4627379 | Other | La1.8.1 | None | ERR867569 | Other | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | SRR11342656 | MDR-TB | lineage2.2.1 | None | ERR176450 | Sensitive | lineage4.1.1.3 | None | SRR13861583 | Other | lineage4.9 | None | SRR7069946 | Other | lineage4.8 | None | SRR13861188 | Other | lineage4.9 | None | SAMN02585988 | MDR-TB | lineage4.4.1.1.1 | None | SRR13861264 | HR-TB | lineage4.9 | None | SRR13861345 | Other | lineage4.9 | None | SRR18002963 | Other | lineage2.2.1 | None | ERR4814442 | Other | lineage4.4.1.1 | None | SRR13861486 | Other | lineage4.9 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR6982196 | Sensitive | None | SRR7070521 | Other | lineage4.2.1.1 | None | ERR4815413 | Other | lineage4.3.4.2.1 | None | SRR13861379 | Other | lineage4.9 | None | SRR16295813 | Other | lineage2.2.1 | None | SRR16295826 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR11349188 | MDR-TB | lineage4.1.2.1 | None | SRR1173717 | MDR-TB | lineage4.6.1.1 | None | SRR13861174 | Other | lineage4.9 | None | SRR13861331 | Other | lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR13861598 | Other | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR11349196 | MDR-TB | lineage2.2.1 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6855718 | Sensitive | lineage4.8 | None | SRR13861532 | Other | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR7070293 | Other | lineage4.8 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4769429 | Other | lineage4.9 | None | SRR13861243 | Other | lineage4.9 | None | SRR6046152 | Other | lineage4.9 | None | SRR6511600 | MDR-TB | lineage4.3.4.2 | None | SRR10306025 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982227 | Sensitive | lineage4.9 | None | SAMN02567676 | MDR-TB | lineage4.6.1.1 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR10869203 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR13861164 | Other | lineage4.9 | None | SRR16295811 | Other | lineage2.2.1 | None | SRR1173113 | Other | lineage4.3;lineage4.9 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | ERR9117714 | Other | lineage3.1.2 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | ERR473298 | Sensitive | lineage4.6.2.2 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | ERR4772230 | Other | La1.2 | None | SRR6045178 | Other | lineage3 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6046359 | Other | lineage4.7 | None | SRR13861728 | Other | lineage4.9 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR7131004 | Other | lineage4.6.2.2 | None | SRR6045928 | Other | lineage4.9 | None | ERR4815040 | Other | lineage4.2.2.2 | None | ERR502484 | Sensitive | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR13861491 | Other | lineage4.9 | None | SRR6824324 | Other | lineage4.5 | None | ERR4816562 | Other | lineage4.8 | None | SRR7070031 | Other | lineage4.5 | None | ERR3559274 | HR-TB | lineage4.2.2 | None | SRR6045705 | Other | lineage4.9 | None | SRR13861397 | HR-TB | lineage4.9 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822176 | Other | lineage4.1.1.2 | None | SRR7069091 | Other | lineage4.6.2 | None | ERR2120270 | MDR-TB | lineage4.6.5 | None | ERR2512832 | Other | lineage4.3.4.1 | None | SRR6044904 | Other | lineage3 | None | SRR10614047 | Sensitive | lineage4.9 | None | SRR13861499 | Other | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR16295773 | Other | lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR3675256 | Other | lineage4.7 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR4769419 | Sensitive | lineage4.9 | None | ERR4769478 | Other | La1.2 | None | ERR4192392 | Other | lineage6.1.1 | None | SRR16295799 | Other | lineage2.2.1 | None | ERR4818671 | Other | lineage4.8 | gb | SRR16295772 | Other | lineage2.2.1 | None | SRR13861580 | Other | lineage4.9 | None | SRR13861702 | Other | lineage4.9 | None | SRR13861494 | Other | lineage4.9 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR16295760 | Other | lineage2.2.1 | None | SRR6045045 | Other | lineage2.2.1 | None | SRR6045384 | Other | lineage4.1.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR13861318 | Other | lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6982053 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR15368914 | MDR-TB | lineage2.2.1 | None | SRR6046541 | Other | lineage4.9 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR7131169 | Other | lineage4.1.2.1 | None | ERR473303 | Sensitive | lineage4.9 | None | SRR6046485 | Other | lineage4.9 | None | ERR4821492 | HR-TB | lineage3 | None | ERR3559284 | HR-TB | lineage4.2.2 | None | SRR13861589 | Other | lineage4.9 | None | SRR13861718 | Other | lineage4.9 | None | SRR6153150 | Other | lineage3.1.1 | None | SRR16295770 | Other | lineage2.2.1 | None | SRR16295808 | Other | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR21239878 | HR-TB | lineage4.4.1.1 | None | ERR5162118 | Other | La1.8.1 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | ERR4819093 | Other | lineage4.3.3 | None | SRR11342646 | HR-TB | lineage3 | None | SRR11349205 | MDR-TB | lineage2.2.1 | None | SRR16295743 | Other | lineage2.2.1 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR6044815 | Other | lineage4.9 | None | SRR6785282 | Other | lineage4.3.3 | None | ERR2027252 | Other | lineage4.2.1.1;lineage4.8 | None | SRR11972378 | MDR-TB | lineage1.1.2 | None | SRR13861258 | Other | lineage4.9 | None | SRR13861274 | Other | lineage4.9 | None | SRR2101816 | Other | lineage4.8 | None | SRR9971372 | MDR-TB | lineage4.1.1.1 | None | SRR13861147 | Other | lineage4.9 | None | SRR13861362 | Other | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861421 | Other | lineage4.9 | None | SRR13861426 | Other | lineage4.9 | None | SRR13861454 | Other | lineage4.9 | None | SRR13861465 | Other | lineage4.9 | None | SRR13861503 | Other | lineage4.9 | None | SRR13861653 | Other | lineage4.9 | None | SRR5818610 | Other | lineage3 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR13861481 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR6046612 | Other | lineage1.1.1.1 | None | ERR4192550 | Sensitive | lineage6.1.1 | None | SRR13861330 | Other | lineage4.9 | None | SRR13861457 | Other | lineage4.9 | None | SRR13861449 | Other | lineage4.9 | None | ERR3148546 | Other | lineage4.3.2 | None | SRR7069839 | Other | lineage4.8 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | ERR502486 | Sensitive | lineage4.9 | None | SRR7069174 | Other | lineage4.3.3 | None | ERR702399 | Sensitive | lineage5.1.1 | gh | SRR3675225 | Other | lineage2.2.1.2 | None | SRR13861468 | Other | lineage4.9 | None | SRR13861519 | Other | lineage4.9 | None | SRR13861522 | Other | lineage4.9 | None | ERR4820736 | Sensitive | lineage4.1.2.1 | gb | SRR7069628 | Other | lineage4.1.2.1 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | SRR7070251 | Sensitive | lineage4.1.1.3.1 | None | ERR867574 | Other | lineage4.9 | None | SRR16295744 | Other | lineage2.2.1 | None | SRR13861534 | Other | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR6201802 | Other | La1.2 | None | ERR9907785 | RR-TB | lineage4.3.2.1 | None | SRR11349175 | Other | lineage2.2.1 | None | ERR245810 | Sensitive | lineage4.9.1 | None | SRR13861631 | Other | lineage4.9 | None | SRR19304094 | Other | lineage6.1.2 | None | ERR4769471 | Other | La1.3 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR4188381 | Other | La1.8.1 | None | SRR6045618 | Other | lineage3.1.2 | None | SRR19303949 | Other | lineage4.3.3 | None | ERR3559276 | HR-TB | lineage4.2.2 | None | SRR13861692 | Other | lineage4.9 | None | SRR9971201 | MDR-TB | lineage4.4.1.1.1 | None | SRR2101681 | Sensitive | lineage4.8 | None | ERR3261359 | Other | lineage4.9 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR16295801 | Other | lineage2.2.1 | None | SRR3675389 | Other | lineage4.9 | None | ERR4815080 | Other | lineage4.1.2.1 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | SRR8217893 | HR-TB | lineage2.2.1 | None | SRR7131251 | Other | lineage2.2.1 | None | SRR6153166 | Other | lineage1.2.1.2.1 | ca | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR13861567 | Other | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR16295763 | Other | lineage2.2.1 | None | SRR13861254 | Other | lineage4.9 | None | ERR9117725 | Other | lineage4.1.1.1 | None | SRR16295819 | Other | lineage2.2.1 | None | ERR10796595 | Other | lineage4.9 | None | SRR13861533 | Other | lineage4.9 | None | SRR13861416 | Other | lineage4.9 | None | SRR16295747 | Other | lineage2.2.1 | None | ERR3559275 | HR-TB | lineage4.2.2 | None | SRR13861161 | Other | lineage4.9 | None | SRR7069669 | Other | lineage3.1.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818401 | HR-TB | lineage2.2.1 | gb | SRR6045496 | Other | lineage6.1.3 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | ERR3283044 | Other | lineage4 | None | ERR2693238 | Sensitive | lineage4.9 | None | SRR7131032 | Other | lineage2.2.1 | None | SRR7069137 | Other | lineage4.8 | None | SRR6046376 | Other | lineage3 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | SRR7131145 | Other | lineage4.1.2.1 | None | ERR4769424 | Sensitive | lineage4.9 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR7069851 | Pre-XDR-TB | lineage3 | None | ERR2307789 | MDR-TB | lineage2.2.1 | None | ERR2229358 | Other | lineage4.8 | None | ERR5865337 | MDR-TB | lineage2.2.1 | None | SRR6824550 | Sensitive | lineage4.5 | None | ERR4821940 | Other | lineage4.9 | None | SRR1019127 | Other | lineage4.9 | None | SRR13861219 | Other | lineage4.9 | None | SRR10726045 | MDR-TB | lineage4.3.3 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | SRR17856664 | Sensitive | lineage3 | None | ERR3797024 | Sensitive | lineage4.9 | None | ERR6866821 | Sensitive | lineage4.1.2.1 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | ERR3261389 | Other | lineage4.9 | None | SRR6045158 | Other | lineage4.9 | None | SRR16295765 | Other | lineage2.2.1 | None | SRR13861278 | Other | lineage4.9 | None | SRR13861158 | Other | lineage4.9 | None | ERR4192417 | Other | lineage6.1.3 | None | SRR13861191 | Other | lineage4.9 | None | SRR13861630 | Other | lineage4.9 | None | SRR13861403 | Other | lineage4.9 | None | SRR13861419 | Other | lineage4.9 | None | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None | SRR11349135 | XDR-TB | lineage4.3.3 | None | SRR13861283 | Other | lineage4.9 | None | SRR6045017 | Other | lineage3.1.2.2 | None | ERR4818785 | Sensitive | lineage4.1.2.1 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR7069233 | Other | lineage1.2.2.2 | None | SRR13861244 | Other | lineage4.9 | None | SRR13861246 | Other | lineage4.9 | None | SRR13861411 | Other | lineage4.9 | None | SRR7131201 | Other | lineage4.8 | None | ERR751729 | Other | lineage1.1.1 | None | ERR4818128 | Other | lineage4.1.2.1 | None | SRR1169301 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR5311080 | Other | La1.8.1 | None | SRR3675527 | Other | lineage4.9 | None | ERR2513378 | Other | lineage3 | None | SRR16295767 | Other | lineage2.2.1 | None | SRR1175304 | HR-TB | lineage4.3.3 | None | ERR1873437 | HR-TB | lineage2.2.2 | None | SRR6896340 | Sensitive | lineage4.4.1.1 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | SRR13861150 | Other | lineage4.9 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR502480 | Other | lineage5.1.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR7444098 | Sensitive | lineage4.9 | None | ERR4769505 | Other | lineage4.9 | None | ERR4769537 | Sensitive | lineage4.9 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR6044993 | Other | lineage3 | None | SRR13861724 | Other | lineage4.9 | None | SRR13423641 | Sensitive | lineage2.2.1 | None | SRR13861400 | Other | lineage4.9 | None | SRR13861545 | Other | lineage4.9 | None | SRR13861627 | Other | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR13861428 | Other | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR6153151 | Sensitive | lineage1.2.1.2.1 | ca | ERR10796625 | Other | lineage4.4.1.1 | None | ERR10796635 | Other | lineage4.8 | None | ERR4818065 | Other | lineage4.1.2.1 | None | SRR13861201 | Other | lineage4.9 | None | SRR13861213 | Other | lineage4.9 | None | SRR13861431 | Other | lineage4.9 | None | SRR13861555 | Other | lineage4.9 | None | SRR13861641 | Other | lineage4.9 | None | DRR184621 | Sensitive | lineage1.1.1.1 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | ERR4818977 | Other | lineage4.1.2.1 | None | ERR4820746 | Other | lineage3 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR10482944 | Other | La1.8.1 | None | SRR13861297 | Other | lineage4.9 | None | SRR16295741 | Other | lineage2.2.1 | None | SRR16295816 | Other | lineage2.2.1 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR13861282 | Other | lineage4.9 | None | SRR13861384 | Other | lineage4.9 | None | SRR13861387 | Other | lineage4.9 | None | SRR13861415 | Other | lineage4.9 | None | SRR13861725 | Other | lineage4.9 | None | SRR3675288 | Other | lineage3 | None | ERR1873461 | Pre-XDR-TB | lineage2.2.2 | None | SRR6981993 | Sensitive | lineage4.3.2.1 | None | ERR10796591 | Other | lineage4.9 | None | ERR5865303 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18213736 | Other | lineage3 | None | ERR502472 | Sensitive | lineage4.6.2.2 | None | SRR3675261 | Other | lineage1.2.1.1 | None | DRR184644 | HR-TB | lineage2.2.1 | None | SRR16295766 | Other | lineage2.2.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR18149430 | Sensitive | lineage4.1.1.3 | None | SRR13861443 | Other | lineage4.9 | None | ERR502483 | Sensitive | lineage4.9 | None | SRR21798279 | MDR-TB | lineage2.2.1 | None | SRR11349210 | MDR-TB | lineage4.4.1.1.1 | None | SRR1140942 | Other | lineage2.2.1;lineage4 | None | SRR13861714 | Other | lineage4.9 | None | SRR6045894 | Other | lineage4.8 | None | ERR1082121 | Sensitive | lineage4.9;lineage5.1.1 | None | ERR10796630 | Other | lineage6.2.3 | None | SRR3105736 | Sensitive | lineage1.2.2.2 | None | SRR1792247 | Other | La1.7.1 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR502497 | Sensitive | lineage4.9 | None | SRR13861369 | Other | lineage4.9 | None | SRR12062482 | MDR-TB | lineage2.2.1.1 | None | ERR5162133 | Sensitive | La1.8.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR10851730 | Other | lineage4.3.3 | None | SRR16295775 | Other | lineage2.2.1 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | SRR13861459 | HR-TB | lineage4.9 | None | SRR13861180 | Other | lineage4.9 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR13861531 | Other | lineage4.9 | None | ERR6149870 | Other | La1.8.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR4816462 | Other | lineage4.1.2.1 | None | SRR13861648 | Other | lineage4.9 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | SRR21240038 | Other | lineage4.1.2.1 | None | SRR13861447 | Other | lineage4.9 | None | SRR6045110 | Other | lineage3 | None | ERR5336160 | Other | lineage6.3.2 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR16295738 | Other | lineage2.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR3675474 | Other | lineage4.1.1.1 | None | SRR13861143 | RR-TB | lineage4.9 | None | SRR13861566 | Other | lineage4.9 | None | SRR7070596 | Other | lineage4.8 | None | SRR16295746 | Other | lineage2.2.1 | None | ERR4819734 | RR-TB | lineage3 | gb | SRR6982014 | Sensitive | lineage4.1.1 | None | SRR7069835 | Other | lineage2.2.1 | None | ERR5865118 | MDR-TB | lineage2.2.1 | None | SRR1173040 | MDR-TB | lineage4.4.1.1.1 | None | SRR6982558 | Sensitive | lineage4.3.4.2.1 | None | ERR502490 | Sensitive | lineage4.9 | None | SRR7131233 | MDR-TB | lineage4.3.3 | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR5863929 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796592 | Other | lineage4.9 | None | ERR3261351 | Other | lineage4.9 | None | ERR4192413 | Sensitive | lineage6.1.1 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | ERR4815795 | Other | lineage1.1.2 | None | SRR5818694 | Other | lineage3;lineage4.2.2.2 | None | ERR4816690 | Other | None | SRR9971017 | HR-TB | lineage2.2.1 | None | ERR10796560 | Other | lineage4.9 | None | SRR13861141 | Other | lineage4.9 | None | ERR2514173 | Other | lineage4.5 | gb | SRR6045138 | Other | lineage3.1.1 | None | ERR2653138 | MDR-TB | lineage4.1.2.1 | None | SRR7070665 | HR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR5007165 | Other | lineage3 | None | ERR1462610 | Other | La2 | None | ERR4818556 | Sensitive | lineage3 | None | SRR13861156 | Other | lineage4.9 | None | SRR1196557 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR13861217 | Other | lineage4.9 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR7069931 | Other | lineage4.2.2.2 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR13861626 | Other | lineage4.9 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR2600576 | Pre-XDR-TB | lineage2.2.1 | None | SRR13861720 | Other | lineage4.9 | None | SRR13861597 | Other | lineage4.9 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046607 | Other | lineage3 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR18149455 | Sensitive | lineage4.1.2.1 | None | ERR10796594 | Other | lineage4.9 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR13861324 | Other | lineage4.9 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | SRR13861438 | Other | lineage4.9 | None | ERR2179857 | Sensitive | lineage4 | None | SRR13861231 | Other | lineage4.9 | None | SRR6046456 | Other | lineage4.1.1.3.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR6201832 | Other | La1.2 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR2101689 | Sensitive | lineage4.3.4.1 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | ERR2600609 | Other | lineage4.8 | None | ERR553231 | Other | lineage4.1.2.1 | None | SRR6046117 | Other | lineage4.9 | None | ERR323036 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR9971351 | RR-TB | lineage2.2.1 | None | SRR7069518 | Other | lineage4.8 | None | SRR13861593 | Other | lineage4.9 | None | SRR3675491 | Other | lineage4.7 | None | ERR10796634 | Other | lineage4.7 | None | SRR7069784 | Other | lineage1.2.2.2 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR7131068 | Other | lineage4.8 | None | SRR7069675 | Other | lineage3 | None | SRR13861651 | Other | lineage4.9 | None | SRR9971369 | MDR-TB | lineage4.1.1.3 | None | SRR13861554 | Other | lineage4.9 | None | SRR13861608 | Other | lineage4.9 | None | ERR2027256 | Other | lineage4.1.2 | None | SRR16278292 | Other | La1.4 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR5007174 | Other | lineage4.3.4.1 | None | SRR18002932 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802219 | Other | lineage4.8 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6045778 | Other | lineage3.1 | None | SRR6855963 | Sensitive | lineage2.2.1 | None | ERR6201843 | Other | La1.2 | None | ERR2027293 | Other | lineage4.3.4.2 | None | SRR6045986 | Other | lineage3 | None | SRR7069018 | Other | lineage4.8 | None | SRR13861240 | Other | lineage4.9 | None | SRR13861314 | Other | lineage4.9 | None | SRR6046273 | Other | lineage3.1.2 | None | ERR4818265 | Other | lineage4.1.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR13861392 | Other | lineage4.9 | None | ERR2600577 | Pre-XDR-TB | lineage2.2.1 | None | SRR13861303 | Other | lineage4.9 | None | SRR19303964 | Other | lineage4.7 | None | SRR13861440 | Other | lineage4.9 | None | SRR13861646 | Other | lineage4.9 | None | SRR11342680 | Other | lineage4.8 | None | SRR6045159 | Other | lineage3.1.1 | None | ERR502492 | Sensitive | lineage4.9 | None | SRR7068875 | Other | lineage3.1.2.2 | None | SRR7068941 | Other | lineage4.8.2 | None | SRR13861390 | Other | lineage4.9 | None | SRR6046275 | Other | lineage3.1.1;lineage4 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | SRR6982037 | Sensitive | lineage4.1.1.1 | None | SRR9970995 | XDR-TB | lineage4.3.3 | None | SRR9971025 | Other | lineage2.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070533 | HR-TB | lineage3 | None | SRR7444074 | Sensitive | lineage4.9 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR2229033 | Other | lineage4.8 | None | SRR1184379 | Other | lineage2.2.2;lineage4.9 | None | SRR13861727 | Other | lineage4.9 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR2513401 | HR-TB | lineage3 | None | SRR6046815 | Other | lineage3 | None | SRR13861307 | Other | lineage4.9 | None | SRR13861463 | Other | lineage4.9 | None | ERR736805 | Sensitive | lineage2.2.1 | None | SRR13861372 | Other | lineage4.9 | None | SRR6045485 | Other | lineage4.9 | None | SRR16295752 | Other | lineage2.2.1 | None | SRR11349185 | Other | lineage4.4.1.1.1 | None | SRR6045124 | Other | lineage4.9 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR8025347 | Sensitive | lineage4.9 | None | SRR18002995 | Other | lineage4.4.2 | None | ERR3276005 | Other | lineage4.1.2.1 | nl | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR19612366 | Other | lineage4.5 | None | SRR11342669 | Other | lineage4.8 | None | SRR13861482 | Other | lineage4.9 | None | ERR2513830 | RR-TB | lineage4.8 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6046655 | Other | lineage4.1.2.1 | None | SRR13861562 | Other | lineage4.9 | None | ERR3559287 | HR-TB | lineage4.2.2 | None | SRR7069954 | Other | lineage1.2.2.2 | None | SRR7131123 | Other | lineage4.8 | None | SRR3675552 | Other | lineage4.9 | None | SRR20969923 | Other | La1.7;lineage2.2.1 | None | SRR7069255 | Other | lineage4.1.2 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR7070320 | Other | lineage4.8 | None | ERR4829208 | Other | lineage4.8 | None | SRR7131237 | Other | lineage2.2.1 | None | SRR7070383 | Other | lineage4.1.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR14782113 | Pre-XDR-TB | lineage4.2.1 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None |
|---|
