lineage | Count |
---|---|
lineage2.2.1 | 80 |
lineage4.9 | 323 |
lineage3.1.1 | 9 |
lineage2.2.1;lineage4.9 | 2 |
lineage4.3.3 | 15 |
lineage4.4.1.1;lineage4.6.1.2 | 2 |
La1.8.1 | 37 |
lineage4 | 4 |
La1.7.1 | 7 |
lineage4.1.1.3 | 12 |
lineage4.1.2 | 7 |
lineage4.8 | 24 |
lineage4.3.4.2.1 | 17 |
lineage4.3.2.1 | 20 |
lineage1.2.2.2 | 4 |
lineage4.4.1.1 | 14 |
lineage3.1.2.2 | 1 |
lineage2.2.2 | 17 |
lineage4.2.1 | 4 |
La1.2 | 14 |
lineage1.1.3.2 | 7 |
lineage1.1.3 | 1 |
lineage5 | 1 |
La1.2.BCG | 7 |
lineage4.6.1.2 | 2 |
lineage4.6.2.2 | 3 |
lineage4.1.2.1 | 18 |
lineage2.2.1.1 | 8 |
lineage5.1.1 | 2 |
lineage3 | 14 |
lineage4.6.1.1 | 5 |
La1.3 | 3 |
lineage1.2.2.1 | 3 |
lineage4.2.2.2 | 4 |
lineage4.4.1.2 | 5 |
lineage4.7 | 4 |
lineage4.3.2 | 3 |
La1.4 | 2 |
lineage4.3.2.1;lineage4.9 | 1 |
La1.8.2 | 5 |
lineage4.1.1.1 | 3 |
lineage4.3.4.2 | 4 |
lineage4.4.2 | 4 |
lineage1.2.1.2.1 | 4 |
lineage1.2.1.2 | 1 |
lineage1.1.1.1 | 2 |
La1.8.1;lineage4.9 | 3 |
lineage3;lineage4.9 | 1 |
2 | |
lineage1.1.1 | 2 |
lineage1.1.3.1 | 1 |
lineage4.1.1.1;lineage4.9 | 1 |
lineage2.2.1.2 | 1 |
lineage4.9.1 | 2 |
lineage4.1.4 | 2 |
lineage2.2.2;lineage4 | 2 |
lineage4.1.1.2 | 1 |
lineage4.5 | 4 |
lineage2.2.1;lineage4 | 1 |
lineage1.1.2 | 5 |
lineage4.3.4.1 | 5 |
lineage4.1.1 | 2 |
lineage4.2.1.1 | 3 |
La1.6;La3;M.canetti;lineage4.2.2 | 1 |
La1.6 | 1 |
La1.2.BCG;lineage4.9 | 1 |
lineage2.2;lineage3 | 1 |
lineage4.3.4.1;lineage4.9 | 1 |
lineage2.1 | 1 |
lineage4.8.1 | 1 |
lineage4.1.1.3;lineage4.9 | 1 |
lineage2.2.2;lineage4.9 | 1 |
lineage1.2.1.2.1;lineage4.9 | 1 |
lineage3.1.2.1 | 1 |
La3;M.canetti;lineage2.1;lineage4.9 | 1 |
La1.8.X-unk6 | 1 |
lineage2.2.1;lineage3 | 1 |
La1.8.1;lineage4 | 1 |
lineage1.1.2;lineage4 | 1 |
lineage4.8;lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 784 |
ID | Drug resistance | Lineage | Country iso2 | SRR6982400 | Other | lineage2.2.1 | None | SRR13861651 | Other | lineage4.9 | None | ERR216901 | Other | lineage3.1.1 | None | SRR6982398 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR14782707 | Other | lineage2.2.1 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | SRR1049563 | HR-TB | lineage4.4.1.1;lineage4.6.1.2 | None | SRR1183015 | Other | lineage4.9 | None | ERR4188255 | Sensitive | lineage4.9 | None | ERR1873482 | Pre-XDR-TB | lineage2.2.1 | None | SRR13861683 | Other | lineage4.9 | None | ERR4187636 | Sensitive | La1.8.1 | None | ERR161125 | Sensitive | lineage4 | None | ERR164004 | Sensitive | lineage4.9 | None | SRR18391772 | Other | La1.7.1 | None | ERR4627392 | Other | La1.8.1 | None | ERR176450 | Sensitive | lineage4.1.1.3 | None | SRR13861583 | Other | lineage4.9 | None | SRR21675949 | Other | lineage4.3.3 | None | SRR13861487 | Other | lineage4.9 | None | SRR13861417 | HR-TB | lineage4.9 | None | SRR13861534 | Other | lineage4.9 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR1011480 | MDR-TB | lineage4.8 | None | SRR13861379 | Other | lineage4.9 | None | SRR13861711 | Other | lineage4.9 | None | ERR176771 | Sensitive | lineage4.3.4.2.1 | None | SRR6982048 | Sensitive | lineage4.3.2.1 | None | SAMN02419540 | Other | lineage2.2.1 | None | SRR19576436 | Sensitive | lineage1.2.2.2 | None | SRR1173384 | Other | lineage4.9 | None | SRR13861631 | Other | lineage4.9 | None | SRR13861351 | Other | lineage4.9 | None | SRR13861598 | Other | lineage4.9 | None | SRR13861532 | Other | lineage4.9 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR1062820 | Pre-XDR-TB | lineage2.2.1 | None | SRR13861157 | Other | lineage4.9 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR4769429 | Other | lineage4.9 | None | SRR13861573 | Other | lineage4.9 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | SRR13861144 | Other | lineage4.9 | None | ERR6362473 | MDR-TB | lineage2.2.2 | None | SRR13861394 | Other | lineage4.9 | None | SRR13861164 | Other | lineage4.9 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR13861734 | Other | lineage4.9 | None | ERR2179737 | HR-TB | lineage4.2.1 | None | ERR2446382 | Other | lineage4 | None | ERR323061 | Sensitive | lineage4.9 | None | SRR6982494 | Other | lineage2.2.2 | None | ERR2693238 | Sensitive | lineage4.9 | None | ERR6201910 | Other | La1.2 | None | SRR1183268 | Other | lineage4.9 | None | SRR2101663 | Sensitive | lineage1.1.3.2 | None | SRR10869085 | Sensitive | lineage2.2.1 | None | ERR5865337 | MDR-TB | lineage2.2.1 | None | SRR13861433 | Other | lineage4.9 | None | SRR21711124 | Other | lineage1.1.3 | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR439982 | Sensitive | lineage5 | None | SRR13861568 | Other | lineage4.9 | None | SRR1915484 | Other | La1.2.BCG | None | SRR13861219 | Other | lineage4.9 | None | ERR3324375 | Other | lineage1.1.3.2 | None | DRR185024 | Other | lineage2.2.2 | None | ERR987757 | MDR-TB | lineage4.6.1.2 | None | SRR13861403 | Other | lineage4.9 | None | SRR13861419 | Other | lineage4.9 | None | SRR13861499 | Other | lineage4.9 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | SRR13861283 | Other | lineage4.9 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | SRR6397389 | Sensitive | lineage4.1.2.1 | None | SRR15368940 | Sensitive | lineage2.2.1.1 | None | ERR4187921 | Sensitive | lineage4.9 | None | SRR2101773 | Sensitive | lineage4.3.4.2.1 | None | SRR13861452 | Other | lineage4.9 | None | ERR2228941 | Other | lineage4.8 | None | SRR1057937 | Sensitive | lineage4.9 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | SRR13861186 | Other | lineage4.9 | None | SRR12882768 | RR-TB | lineage3.1.1 | None | SRR6397551 | Other | lineage4.1.1.3 | None | SRR13861281 | Other | lineage4.9 | None | SRR13861514 | Other | lineage4.9 | None | SRR13861586 | Other | lineage4.9 | None | ERR4627379 | Other | La1.8.1 | None | SRR13861294 | Other | lineage4.9 | None | SRR10869292 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769482 | Sensitive | lineage4.9 | None | SRR6982070 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR13861142 | Other | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | ERR702399 | Sensitive | lineage5.1.1 | gh | ERR1465744 | Sensitive | lineage4.1.2.1 | None | SRR13861188 | Other | lineage4.9 | None | SRR13861264 | HR-TB | lineage4.9 | None | ERR987719 | HR-TB | lineage3 | None | SRR13861486 | Other | lineage4.9 | None | ERR4423724 | RR-TB | lineage3 | None | SRR5341312 | Pre-XDR-TB | lineage2.2.1 | None | SRR13861498 | Other | lineage4.9 | None | SRR6152972 | Other | lineage2.2.1.1 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | ERR212042 | HR-TB | lineage3.1.1 | None | SRR15368973 | Other | lineage4.9 | None | SRR13861175 | Other | lineage4.9 | None | ERR6201802 | Other | La1.2 | None | ERR6201814 | Other | La1.2 | None | SRR11349188 | MDR-TB | lineage4.1.2.1 | None | SRR1173717 | MDR-TB | lineage4.6.1.1 | None | ERR3275434 | Other | lineage4.1.2.1 | nl | ERR6208726 | Other | La1.2 | None | ERR4769471 | Other | La1.3 | None | ERR4188381 | Other | La1.8.1 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR13861692 | Other | lineage4.9 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR1062863 | Sensitive | lineage1.2.2.1 | None | SAMN02380985 | Sensitive | lineage4.2.2.2 | None | SRR21714045 | Other | lineage2.2.1 | None | ERR4769518 | Sensitive | lineage4.9 | None | SRR13861243 | Other | lineage4.9 | None | SRR13861391 | Other | lineage4.9 | None | ERR323068 | Sensitive | lineage4.9 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR13861523 | Other | lineage4.9 | None | ERR6338285 | Other | La1.2 | None | SRR6397644 | Sensitive | lineage4.4.1.2 | None | SAMN02350437 | MDR-TB | lineage4.8 | None | SRR10306025 | Pre-XDR-TB | lineage2.2.1 | None | SRR6397770 | Other | lineage4.7 | None | ERR7801177 | Other | lineage4.3.4.2.1 | None | SRR6982195 | Sensitive | lineage4.4.1.1 | None | SRR6982227 | Sensitive | lineage4.9 | None | ERR560439 | Other | lineage4.9 | None | SRR7131050 | MDR-TB | lineage4.3.3 | None | SRR13861567 | Other | lineage4.9 | None | SAMN02567676 | MDR-TB | lineage4.6.1.1 | None | SRR1049569 | Sensitive | lineage4.2.2.2 | None | SRR10869203 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4188213 | Other | La1.8.1 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR13861254 | Other | lineage4.9 | None | SRR13861389 | Other | lineage4.9 | None | SRR13861533 | Other | lineage4.9 | None | SRR13861600 | Other | lineage4.9 | None | SRR13861617 | Other | lineage4.9 | None | SRR6398007 | Other | lineage4.1.2.1 | ca | SRR8649122 | Sensitive | lineage4.7 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | SRR1011450 | Pre-XDR-TB | lineage2.2.1 | None | SRR13861161 | Other | lineage4.9 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | ERR473298 | Sensitive | lineage4.6.2.2 | None | ERR4772210 | Other | La1.2 | None | ERR4772230 | Other | La1.2 | None | SRR6397575 | Other | lineage4.3.4.2.1 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6397359 | Sensitive | lineage4.3.2 | ca | SRR16278273 | Other | La1.4 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | SRR6982035 | Sensitive | lineage4.3.2.1;lineage4.9 | None | SRR7240506 | Other | La1.8.1 | None | SRR6046752 | Sensitive | lineage4.2.2.2 | None | ERR4188218 | Sensitive | lineage4.9 | None | SRR13861470 | Other | lineage4.9 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | ERR5863930 | Pre-XDR-TB | lineage2.2.1 | None | ERR6149874 | Other | La1.8.2 | None | SRR5065527 | Other | lineage2.2.1 | None | SRR7131185 | Other | lineage4.1.2.1 | None | SRR6982175 | Sensitive | lineage1.1.3.2 | None | ERR1063847 | Sensitive | lineage3.1.1 | None | ERR6140667 | Other | La1.8.2 | None | SRR6982383 | Other | lineage4.3.2.1 | None | SRR13861446 | Other | lineage4.9 | None | SRR13861377 | Other | lineage4.9 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | SRR13861530 | Other | lineage4.9 | None | SRR13861634 | Other | lineage4.9 | None | SRR6982011 | Sensitive | lineage4.1.1.1 | None | ERR502484 | Sensitive | lineage4.9 | None | ERR036215 | Other | lineage4.8 | None | SRR6982337 | Sensitive | lineage4.7 | None | ERR2229358 | Other | lineage4.8 | None | SRR10129602 | Sensitive | lineage4.3.4.2 | None | SRR124453 | HR-TB | lineage2.2.2 | None | SRR13861559 | Other | lineage4.9 | None | SRR6982509 | Sensitive | lineage4.3.2.1 | None | SRR15723287 | Other | lineage4.4.2 | None | SRR6397548 | HR-TB | lineage1.2.1.2.1 | None | ERR5864323 | MDR-TB | lineage4.2.1 | None | ERR4769479 | Other | La1.3 | None | DRR184991 | Other | lineage4.1.2 | vn | SRR7240350 | Other | La1.8.1 | None | ERR2446433 | Other | lineage4.1.2.1 | None | ERR3797007 | Other | La1.8.1 | None | ERR2228859 | Other | lineage4.8 | None | ERR6336784 | Sensitive | lineage1.2.1.2 | None | SRR6982140 | Other | lineage2.2.1.1 | None | SRR18911138 | Other | lineage3 | None | SRR13861693 | Other | lineage4.9 | None | SRR13861397 | HR-TB | lineage4.9 | None | ERR1034692 | Other | lineage1.2.1.2.1 | None | ERR108424 | Sensitive | lineage4.8 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | SRR6397771 | Other | lineage1.1.1.1 | None | SRR8073606 | Other | La1.8.1 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR6153015 | Sensitive | lineage2.2.1 | None | SRR13861462 | Other | lineage4.9 | None | SRR1183080 | Other | lineage4.9 | None | ERR5758436 | Other | lineage2.2.2 | None | SRR13861649 | Other | lineage4.9 | None | SRR13861423 | Other | lineage4.9 | None | SRR13861158 | Other | lineage4.9 | None | ERR5865119 | MDR-TB | lineage2.2.1 | None | SRR13861191 | Other | lineage4.9 | None | SRR13861285 | Other | lineage4.9 | None | SRR13861630 | Other | lineage4.9 | None | SRR13861697 | Other | lineage4.9 | None | SRR1181319 | Sensitive | lineage2.2.1 | None | SRR7240063 | Other | La1.7.1 | None | SRR6982419 | Other | lineage4.8 | None | ERR2446248 | Other | lineage3 | nl | SRR13861236 | Other | lineage4.9 | None | SRR13861244 | Other | lineage4.9 | None | SRR13861246 | Other | lineage4.9 | None | SRR6855851 | Other | lineage4.3.4.2.1 | None | SRR13861411 | Other | lineage4.9 | None | SRR13861502 | HR-TB | lineage4.9 | None | SRR13861461 | Other | lineage4.9 | None | ERR4187641 | Sensitive | La1.8.1;lineage4.9 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | SRR13861429 | Other | lineage4.9 | None | ERR4769470 | Sensitive | lineage4.9 | None | ERR502485 | Sensitive | lineage4.9 | None | SRR13861299 | Other | lineage4.9 | None | ERR736850 | Sensitive | lineage4.9 | None | SRR13861639 | Other | lineage4.9 | None | ERR9786844 | Other | lineage4.3.4.2 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR6982077 | Sensitive | lineage4.3.2.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR13861669 | Other | lineage4.9 | None | ERR5311076 | Other | La1.8.1 | None | ERR2229781 | Other | lineage4.9 | None | ERR5864322 | MDR-TB | lineage4.2.1 | None | SRR7444084 | Sensitive | lineage4.9 | None | SRR7444098 | Sensitive | lineage4.9 | None | ERR702430 | HR-TB | lineage5.1.1 | gh | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR10869086 | Pre-XDR-TB | lineage2.2.2 | None | SRR10869241 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869294 | Pre-XDR-TB | lineage2.2.2 | None | SRR13861587 | Other | lineage4.9 | None | ERR1873463 | MDR-TB | lineage2.2.2 | None | SRR13861182 | Other | lineage4.9 | None | SRR1196582 | Other | lineage4.9 | None | ERR1873555 | Pre-XDR-TB | lineage2.2.1 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | ERR5311088 | Sensitive | La1.8.1 | None | SRR13861345 | Other | lineage4.9 | None | SRR13861468 | Other | lineage4.9 | None | SRR13861519 | Other | lineage4.9 | None | SRR13861522 | Other | lineage4.9 | None | SRR13861535 | Other | lineage4.9 | None | SRR13861422 | Other | lineage4.9 | None | ERR3275567 | Other | lineage3 | nl | ERR4769467 | Sensitive | lineage4.9 | None | ERR4769506 | Sensitive | lineage4.9 | None | ERR5865339 | MDR-TB | lineage2.2.1 | None | SRR6982196 | Sensitive | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR6982066 | Other | lineage4.3.2.1 | None | ERR1873401 | MDR-TB | lineage2.2.2 | None | ERR718268 | Sensitive | lineage1.1.1 | None | SRR1915483 | HR-TB | La1.2.BCG | None | SRR13861174 | Other | lineage4.9 | None | SRR13861331 | Other | lineage4.9 | None | SRR6824357 | Pre-XDR-TB | lineage4.4.2 | None | ERR4769525 | Sensitive | lineage4.9 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | ERR4769393 | Sensitive | lineage4.9 | None | SRR6855718 | Sensitive | lineage4.8 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR13861497 | HR-TB | lineage4.9 | None | SRR6982297 | Sensitive | lineage4.1.1.1;lineage4.9 | None | SRR6982076 | Sensitive | lineage4.9 | None | ERR4769549 | Sensitive | lineage4.9 | None | SRR5341460 | Other | lineage3 | None | SRR6397396 | HR-TB | lineage1.2.1.2.1 | None | ERR6209443 | Other | La1.2 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | SRR13861504 | Other | lineage4.9 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | SRR13861280 | Other | lineage4.9 | None | SRR6046152 | Other | lineage4.9 | None | SRR13861579 | Other | lineage4.9 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR5526841 | MDR-TB | lineage2.2.1.1 | None | SRR10808496 | Sensitive | lineage4.3.2 | None | SRR13199739 | Other | La1.7.1 | None | SRR5065440 | Other | lineage2.2.1.2 | None | ERR6201800 | Other | La1.2 | None | SRR13591377 | Sensitive | lineage4.1.1.3 | None | SRR13861406 | Other | lineage4.9 | None | SRR13861416 | Other | lineage4.9 | None | SRR15316549 | RR-TB | lineage4.4.2 | None | ERR2229332 | Other | lineage4.8 | None | SRR1791899 | Sensitive | La1.8.1;lineage4.9 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | SRR1173269 | Sensitive | lineage4.9 | None | ERR1023527 | Other | lineage4.9.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | SRR21764250 | Other | lineage4.9 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR10123881 | Sensitive | lineage4.1.4 | None | SRR13861728 | Other | lineage4.9 | None | SRR6982146 | Sensitive | lineage4.1.1.3 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | SRR6982430 | Sensitive | lineage4.3.4.2.1 | None | SRR7444102 | Sensitive | lineage4.9 | None | SRR13861248 | Other | lineage4.9 | None | SRR1183018 | Other | lineage4.9 | None | ERR4769424 | Sensitive | lineage4.9 | None | SRR6982405 | Sensitive | lineage4.4.1.1 | None | ERR4187995 | Sensitive | La1.8.1 | None | SRR1013637 | Sensitive | lineage2.2.2;lineage4 | None | SRR7645834 | Other | lineage2.2.1 | None | SRR13861491 | Other | lineage4.9 | None | SRR13861694 | Other | lineage4.9 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR4187993 | Sensitive | La1.8.1 | None | ERR216928 | Other | lineage4.9.1 | None | SRR17856664 | Sensitive | lineage3 | None | ERR3797024 | Sensitive | lineage4.9 | None | ERR6866821 | Sensitive | lineage4.1.2.1 | None | SRR6397642 | Other | lineage4.4.1.1 | None | SRR1791909 | Other | La1.7.1 | None | SRR1013636 | Sensitive | lineage2.2.2;lineage4 | None | SRR6982056 | Other | lineage4.3.4.2.1 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | ERR108444 | Other | lineage4.1.2 | ru | SRR2101709 | Sensitive | lineage4.1.1.3 | None | SRR13199746 | Other | La1.7.1 | None | SRR10614047 | Sensitive | lineage4.9 | None | SRR1049564 | HR-TB | lineage4.4.1.1;lineage4.6.1.2 | None | SRR13861515 | Other | lineage4.9 | None | SRR5341417 | HR-TB | lineage3 | None | SRR13861278 | Other | lineage4.9 | None | SRR6982088 | Other | lineage4.1.1.2 | None | SRR21728710 | Other | lineage4.1.1.3 | None | SRR13861356 | Other | lineage4.9 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | SRR6152886 | HR-TB | lineage3 | None | ERR779913 | MDR-TB | lineage4.1.2.1 | pe | SRR2101643 | Other | lineage2.2.1 | None | ERR4769419 | Sensitive | lineage4.9 | None | SRR13861268 | Other | lineage4.9 | None | SRR6397441 | Other | lineage4.5 | None | SRR1169301 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1915485 | Other | La1.2.BCG | None | SRR13861696 | Other | lineage4.9 | None | SRR1184383 | Other | lineage4.9 | None | ERR5311080 | Other | La1.8.1 | None | ERR6201798 | Other | La1.2 | None | SRR13861702 | Other | lineage4.9 | None | SRR1011488 | Sensitive | lineage2.2.1 | None | SRR13861207 | Other | lineage4.9 | None | ERR2515191 | Other | lineage2.2.1 | za | SRR10808722 | Sensitive | lineage4.8 | None | ERR5865338 | MDR-TB | lineage2.2.1 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | SRR6982448 | Sensitive | lineage2.2.1;lineage4 | None | ERR4188254 | Other | La1.8.1 | None | SRR13861318 | Other | lineage4.9 | None | ERR1873437 | HR-TB | lineage2.2.2 | None | SRR13861150 | Other | lineage4.9 | None | ERR245846 | Sensitive | lineage2.2.1 | None | SRR1915487 | Other | La1.2.BCG | None | SAMN02350409 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982194 | Other | lineage2.2.1 | None | SRR13861343 | Other | lineage4.9 | None | ERR161201 | Sensitive | lineage1.1.3.2 | None | SRR1172808 | Other | lineage4.9 | None | SRR1238557 | Other | lineage4.9 | None | ERR5311093 | Other | La1.8.1 | None | SRR13861323 | Other | lineage4.9 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | SRR13861410 | Other | lineage4.9 | None | SRR13861718 | Other | lineage4.9 | None | SRR13861724 | Other | lineage4.9 | None | SRR13423641 | Sensitive | lineage2.2.1 | None | SRR13861162 | Other | lineage4.9 | None | SRR13861192 | Other | lineage4.9 | None | SRR13861400 | Other | lineage4.9 | None | SRR13861479 | Other | lineage4.9 | None | SRR8375622 | MDR-TB | lineage1.1.2 | None | ERR5865343 | MDR-TB | lineage2.2.1 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | SRR1791921 | Other | La1.8.1 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | SRR11342646 | HR-TB | lineage3 | None | SRR2101617 | Sensitive | lineage4.1.1.1 | None | SRR6981978 | Sensitive | lineage4.3.4.2.1 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6982102 | Sensitive | lineage2.2.1 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | ERR176806 | Sensitive | lineage4.3.4.2.1 | mw | SRR6982043 | Sensitive | lineage4.4.1.1 | None | ERR5863929 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869293 | Pre-XDR-TB | lineage2.2.1 | None | ERR502486 | Sensitive | lineage4.9 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6982362 | Sensitive | lineage4.3.2.1 | None | SRR13861282 | Other | lineage4.9 | None | SRR13861325 | Other | lineage4.9 | None | SRR13861336 | Other | lineage4.9 | None | SRR13861384 | Other | lineage4.9 | None | SRR13861387 | Other | lineage4.9 | None | SRR6152854 | Other | lineage4.1.2.1 | None | SRR6397406 | Other | lineage4.1.2.1 | None | SRR6397568 | Other | lineage4.1.1 | None | SRR6981993 | Sensitive | lineage4.3.2.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | ERR502483 | Sensitive | lineage4.9 | None | SRR13861480 | Sensitive | lineage4.9 | None | ERR2653138 | MDR-TB | lineage4.1.2.1 | None | SRR6152979 | Other | lineage4.7 | None | SRR6153268 | Other | lineage2.2.1.1 | ca | SRR6397638 | Other | lineage4.2.1.1 | None | SRR6855967 | Sensitive | lineage4.1.2 | None | ERR3283034 | Sensitive | lineage4.9 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | ERR5863931 | Pre-XDR-TB | lineage2.2.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR6397721 | Other | lineage4.2.1.1 | None | SRR3105736 | Sensitive | lineage1.2.2.2 | None | SRR1792247 | Other | La1.7.1 | None | ERR216949 | Sensitive | lineage4.3.4.1 | None | ERR502497 | Sensitive | lineage4.9 | None | SRR13861369 | Other | lineage4.9 | None | SRR4037619 | Sensitive | lineage4.3.2.1 | None | ERR2229033 | Other | lineage4.8 | None | SRR1011489 | Sensitive | lineage2.2.1.1 | None | SRR13861459 | HR-TB | lineage4.9 | None | ERR163988 | Sensitive | lineage4.1.2 | None | SRR12882669 | Sensitive | lineage3.1.1 | None | ERR3324351 | HR-TB | lineage4.1.4 | None | SRR13861597 | Other | lineage4.9 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | SRR1049030 | Sensitive | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | SRR13861143 | RR-TB | lineage4.9 | None | SRR13861642 | Other | lineage4.9 | None | ERR4188372 | Sensitive | La1.8.1;lineage4.9 | None | SRR13861329 | Other | lineage4.9 | None | SRR2101595 | RR-TB | lineage4.3.4.2.1 | None | ERR1144989 | Sensitive | lineage4.8 | None | SRR10993953 | Other | La1.6 | None | ERR751729 | Other | lineage1.1.1 | None | ERR1873549 | Pre-XDR-TB | lineage2.2.2 | None | SRR13861352 | Other | lineage4.9 | None | ERR190332 | Sensitive | lineage4.3.4.1 | None | ERR6149868 | Other | La1.8.2 | None | SRR13861580 | Other | lineage4.9 | None | SRR21764246 | Other | lineage4.9 | None | SRR13861286 | Other | lineage4.9 | None | SRR13861494 | Other | lineage4.9 | None | ERR560443 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR1173380 | Pre-XDR-TB | lineage2.2;lineage3 | None | SRR7240448 | Other | La1.8.1 | None | ERR323048 | Sensitive | lineage4.9 | None | SRR6982053 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR13861179 | Other | lineage4.9 | None | SRR15368914 | MDR-TB | lineage2.2.1 | None | SRR6855917 | Sensitive | lineage4.8 | None | SRR6896340 | Sensitive | lineage4.4.1.1 | None | ERR4831631 | Sensitive | lineage4.9 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR2101628 | Other | lineage4.3.2.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR2747622 | Sensitive | lineage4.9 | None | SRR6824603 | Sensitive | lineage4.4.2 | None | SRR5341390 | HR-TB | lineage1.1.2 | None | ERR4769462 | Other | La1.3 | None | ERR4769505 | Other | lineage4.9 | None | SRR13861735 | Other | lineage4.9 | None | SRR13861589 | Other | lineage4.9 | None | SRR13861545 | Other | lineage4.9 | None | SRR13861627 | Other | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR13861707 | Other | lineage4.9 | None | SRR12420396 | Sensitive | lineage2.2.1 | None | SRR7236240 | Other | La1.8.1 | None | SRR14782760 | Sensitive | lineage4.3.4.1 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR13861428 | Other | lineage4.9 | None | SRR13861200 | Other | lineage4.9 | None | ERR987733 | Other | lineage4.6.1.1 | None | ERR144568 | Sensitive | None | SRR11972420 | MDR-TB | lineage2.2.1 | None | ERR216950 | Sensitive | lineage1.1.3.2 | None | ERR2228873 | Other | lineage4.8 | None | SRR6789621 | Other | lineage4.9 | None | SRR7240070 | Other | La1.8.1 | None | SRR1049031 | Sensitive | lineage4.9 | None | SRR1062851 | MDR-TB | lineage4.8 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR11662417 | Pre-XDR-TB | lineage2.1 | None | SRR1181136 | Sensitive | lineage2.2.1 | None | SRR13861258 | Other | lineage4.9 | None | SRR13861274 | Other | lineage4.9 | None | SRR2101711 | Sensitive | lineage2.2.1 | None | SRR2101816 | Other | lineage4.8 | None | ERR2229336 | Other | lineage4.8 | None | ERR3283009 | Other | La1.8.1 | None | ERR502489 | Sensitive | lineage4.9 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR10482944 | Other | La1.8.1 | None | ERR773804 | Sensitive | lineage4.9 | None | ERR1873561 | XDR-TB | lineage2.2.2 | None | SRR13591376 | Sensitive | lineage4.3.2 | None | SRR13861297 | Other | lineage4.9 | None | SRR13861481 | Other | lineage4.9 | None | SRR13861464 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR16278292 | Other | La1.4 | None | SRR17567952 | Other | lineage4.4.1.2 | None | SRR1049568 | Sensitive | lineage4.2.2.2 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR2515721 | Sensitive | lineage4.3.2.1 | None | SRR12882020 | Other | lineage3.1.1 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR6855963 | Sensitive | lineage2.2.1 | None | SRR6856087 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR6201843 | Other | La1.2 | None | ERR2515484 | Sensitive | lineage4.8 | None | ERR473304 | Sensitive | lineage2.2.1 | None | SRR124452 | Sensitive | lineage2.2.2;lineage4.9 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | SRR1791940 | Other | La1.8.1 | None | SRR12634543 | Sensitive | lineage4.8 | None | SRR5065436 | HR-TB | lineage2.2.1 | None | SRR13861240 | Other | lineage4.9 | None | SRR13861314 | Other | lineage4.9 | None | SRR13861420 | Other | lineage4.9 | None | ERR6201937 | Other | La1.2 | None | ERR2228888 | Other | lineage4.8 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR161045 | Sensitive | lineage4.3.4.2.1 | None | ERR736825 | Sensitive | lineage4.9 | None | SRR1173705 | Other | lineage4.9 | None | ERR502472 | Sensitive | lineage4.6.2.2 | None | DRR184644 | HR-TB | lineage2.2.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR18149430 | Sensitive | lineage4.1.1.3 | None | SRR13861392 | Other | lineage4.9 | None | SRR13861303 | Other | lineage4.9 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR13861646 | Other | lineage4.9 | None | SRR5341375 | Other | lineage4.9 | None | SRR6045036 | Other | lineage4.9 | None | ERR502492 | Sensitive | lineage4.9 | None | SRR6153036 | Other | lineage1.2.1.2.1;lineage4.9 | None | SRR1162501 | Other | lineage2.2.1 | None | ERR5162133 | Sensitive | La1.8.1 | None | ERR4798523 | MDR-TB | lineage1.2.2.2 | None | ERR3468549 | Sensitive | lineage4.9 | None | SRR15723110 | Sensitive | lineage2.2.1 | None | SRR10869318 | Sensitive | lineage2.2.1 | None | SAMN02599156 | HR-TB | lineage3.1.2.1 | None | SAMN02350450 | Sensitive | lineage1.2.2.1 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR7444074 | Sensitive | lineage4.9 | None | SRR1011492 | Sensitive | lineage1.2.2.1 | None | SRR7236216 | Other | La1.8.1 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR7236178 | Other | La1.8.1 | None | SRR13861673 | Other | lineage4.9 | None | ERR1034765 | HR-TB | lineage4.3.3 | None | SRR13861180 | Other | lineage4.9 | None | SRR13861187 | Other | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR13861720 | Other | lineage4.9 | None | SRR13628039 | Sensitive | lineage4.9 | None | SRR13861531 | Other | lineage4.9 | None | ERR6149870 | Other | La1.8.2 | None | SRR1915490 | Other | La1.2.BCG | None | SRR6153042 | Other | lineage4.4.1.1 | None | SRR13861648 | Other | lineage4.9 | None | SRR13861447 | Other | lineage4.9 | None | SRR6982139 | Sensitive | lineage4.9 | None | SRR6982328 | Sensitive | lineage3.1.1 | None | ERR718384 | MDR-TB | lineage4.5 | th | SRR7240449 | Other | La1.8.1 | None | ERR1873476 | Pre-XDR-TB | lineage2.2.2 | None | SRR1019130 | Sensitive | lineage4.3.2.1 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025347 | Sensitive | lineage4.9 | None | SRR18149455 | Sensitive | lineage4.1.2.1 | None | ERR2515916 | Other | lineage4.3.4.2.1 | za | SRR1915486 | HR-TB | La1.2.BCG | None | SRR1792140 | Other | La1.8.1 | None | SRR18149443 | Sensitive | lineage3 | None | SRR13861195 | Other | lineage4.9 | None | SRR13861312 | Other | lineage4.9 | None | SRR13861566 | Other | lineage4.9 | None | SRR1180982 | Other | lineage2.2.1 | None | SRR6389899 | Other | lineage4.1.2 | None | ERR6201832 | Other | La1.2 | None | SRR13861685 | Other | lineage4.9 | None | ERR1034722 | Other | lineage4.9 | None | SRR2101691 | Other | lineage2.2.1 | None | SRR6982014 | Sensitive | lineage4.1.1 | None | ERR323036 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR13861593 | Other | lineage4.9 | None | SRR19612366 | Other | lineage4.5 | None | SRR13861324 | Other | lineage4.9 | None | SRR13861482 | Other | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | SRR5341288 | Pre-XDR-TB | lineage3 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR7131220 | Other | lineage4.1.2.1 | None | SRR7236374 | Other | La1.8.1 | None | SRR6982558 | Sensitive | lineage4.3.4.2.1 | None | ERR4187916 | Other | La1.8.1 | None | ERR036194 | Other | lineage4.6.1.2 | None | ERR4188395 | Sensitive | La1.8.1 | None | ERR6198389 | Other | La1.2 | None | SRR7240420 | Other | La1.8.X-unk6 | None | SRR13861383 | Other | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | SRR13861619 | Other | lineage4.9 | None | ERR3806453 | Other | lineage4.3.4.2 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR6981948 | Sensitive | lineage4.3.2.1 | None | SRR7585400 | MDR-TB | lineage3 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR10315603 | MDR-TB | lineage4.8 | None | SRR13591410 | Other | lineage4.9 | None | SRR13861201 | Other | lineage4.9 | None | SRR13861213 | Other | lineage4.9 | None | SRR13861430 | Other | lineage4.9 | None | SRR13861431 | Other | lineage4.9 | None | SRR13861555 | Other | lineage4.9 | None | SRR13861641 | Other | lineage4.9 | None | SRR13861624 | Other | lineage4.9 | None | ERR4187800 | Sensitive | La1.8.1 | None | SRR11972378 | MDR-TB | lineage1.1.2 | None | ERR176464 | Other | lineage3.1.1 | None | ERR2747615 | Sensitive | lineage4.9 | None | ERR6149876 | Other | La1.8.2 | None | SRR1173800 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR13861147 | Other | lineage4.9 | None | SRR13861309 | Other | lineage4.9 | None | SRR13861362 | Other | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861421 | Other | lineage4.9 | None | SRR13861426 | Other | lineage4.9 | None | SRR13861454 | Other | lineage4.9 | None | SRR13861465 | Other | lineage4.9 | None | SRR13861503 | Other | lineage4.9 | None | SRR13861521 | Other | lineage4.9 | None | SRR13861537 | Other | lineage4.9 | None | SRR13861653 | Other | lineage4.9 | None | SRR6480593 | Sensitive | lineage4.1.2.1 | None | SRR6824624 | Sensitive | lineage2.2.1 | None | SRR13861265 | HR-TB | lineage4.9 | None | SRR13861554 | Other | lineage4.9 | None | SRR13861608 | Other | lineage4.9 | None | SRR13861680 | Other | lineage4.9 | None | ERR9285816 | Sensitive | lineage4.3.3 | None | SRR1173361 | MDR-TB | lineage4.6.1.1 | None | SRR1791908 | Other | La1.8.1 | None | SRR6397588 | Other | lineage2.2.1 | None | SRR6397727 | Other | lineage4.2.1.1 | None | SRR13861211 | HR-TB | lineage4.9 | None | SRR13861330 | Other | lineage4.9 | None | SRR13861457 | Other | lineage4.9 | None | SRR13861449 | Other | lineage4.9 | None | SRR13861569 | Other | lineage4.9 | None | SRR13861717 | Other | lineage4.9 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | SRR7236372 | Other | La1.8.1 | None | ERR4187819 | Sensitive | La1.8.1;lineage4 | None | SRR13861476 | Other | lineage4.9 | None | SRR13861415 | Other | lineage4.9 | None | SRR13861607 | Other | lineage4.9 | None | SRR13861725 | Other | lineage4.9 | None | SRR13861668 | Other | lineage4.9 | None | ERR1873461 | Pre-XDR-TB | lineage2.2.2 | None | SRR12882699 | Sensitive | lineage1.1.2 | None | SRR7240069 | Other | La1.8.1 | None | SRR1792157 | Other | La1.8.1 | None | ERR190388 | Sensitive | lineage4.9 | None | SRR13861510 | Other | lineage4.9 | None | SRR13861637 | Other | lineage4.9 | None | SRR6856094 | Other | lineage2.2.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6981912 | Sensitive | lineage4.3.2.1 | None | SRR6982138 | Sensitive | lineage4.1.1.3 | None | SRR1183100 | MDR-TB | lineage4.2.1 | None | SRR13861141 | Other | lineage4.9 | None | SRR13861159 | Other | lineage4.9 | None | SRR13861256 | Other | lineage4.9 | None | SRR13861375 | Other | lineage4.9 | None | SRR13861495 | HR-TB | lineage4.9 | None | ERR036242 | Sensitive | lineage4.3.4.2.1 | None | ERR163952 | Sensitive | lineage1.1.3.2 | None | SRR6982078 | Sensitive | lineage4.9 | None | SRR6982178 | Sensitive | lineage2.2.1 | None | SRR13861443 | Other | lineage4.9 | None | SRR13861374 | Other | lineage4.9 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | SRR13861440 | Other | lineage4.9 | None | SRR5065506 | HR-TB | lineage1.1.1.1 | None | SRR21728339 | Other | lineage3 | None | SRR13861714 | Other | lineage4.9 | None | SRR1915482 | HR-TB | La1.2.BCG | None | SRR13861390 | Other | lineage4.9 | None | SRR13861232 | Other | lineage4.9 | None | SRR13861156 | Other | lineage4.9 | None | SRR13861206 | Other | lineage4.9 | None | SRR6982037 | Sensitive | lineage4.1.1.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | SRR13861217 | Other | lineage4.9 | None | SRR13861626 | Other | lineage4.9 | None | SRR13861727 | Other | lineage4.9 | None | SRR6982057 | HR-TB | lineage4.3.3 | None | SRR13861307 | Other | lineage4.9 | None | SRR13861463 | Other | lineage4.9 | None | ERR736805 | Sensitive | lineage2.2.1 | None | SRR13861372 | Other | lineage4.9 | None | ERR3468754 | Sensitive | lineage4.9 | None | ERR4817102 | Sensitive | lineage1.1.2;lineage4 | None | ERR176820 | Sensitive | lineage4.3.4.2.1 | mw | ERR4188021 | Other | La1.8.1 | None | SRR2101685 | Sensitive | lineage4.9 | None | ERR6362858 | Pre-XDR-TB | lineage2.2.2 | None | SRR13861453 | Other | lineage4.9 | None | ERR5987447 | MDR-TB | lineage2.2.1 | None | SRR1173508 | Sensitive | lineage4.9 | None | SRR13861353 | Other | lineage4.9 | None | ERR2124088 | Other | lineage4.4.1.1 | None | SRR13861438 | Other | lineage4.9 | None | SRR13861227 | Other | lineage4.9 | None | ERR2229780 | Other | lineage4.9 | None | SRR13861230 | Other | lineage4.9 | None | ERR2179857 | Sensitive | lineage4 | None | SRR13861231 | Other | lineage4.9 | None | SRR13861562 | Other | lineage4.9 | None | SRR13861572 | Other | lineage4.9 | None | SRR1202599 | Other | lineage4.9 | None | SRR6397818 | RR-TB | lineage4.4.1.1 | None | SRR13861658 | Other | lineage4.9 | None | ERR2228874 | Other | lineage4.8;lineage4.9 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | SRR6397585 | Other | lineage4.4.1.2 | None | SRR6152986 | Other | lineage2.2.1 | None | SRR2101689 | Sensitive | lineage4.3.4.1 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | SRR7236253 | Other | La1.7.1 | None | ERR1063890 | Sensitive | lineage3.1.1 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | ERR5865118 | MDR-TB | lineage2.2.1 | None | SRR6981918 | Sensitive | lineage4.4.1.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR1063866 | Sensitive | lineage4.3.3 | None |
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