EBG00000313339 - n.242A>C
Drug resistance types
48 Sensitive
8 RR-TB
81 HR-TB
21 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
97 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.2 | 2 |
| lineage2 | 2 |
| La1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.3 | 8 |
| lineage4.8 | 9 |
| 74 | |
| lineage3 | 11 |
| lineage2.2.2 | 2 |
| lineage4.1.2.1.1 | 2 |
| lineage4.9 | 23 |
| lineage4.3.2 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.1 | 21 |
| lineage2.2 | 7 |
| lineage4.8.1 | 2 |
| lineage4.1.1 | 3 |
| lineage4.8;lineage4.1 | 2 |
| lineage4.6.4 | 2 |
| lineage5.2 | 2 |
| lineage4.1.2.1 | 22 |
| lineage4.6.2.2 | 5 |
| lineage4.1.3 | 2 |
| lineage6.2.3 | 1 |
| lineage6.1.3 | 1 |
| lineage4.6.1.2 | 1 |
| La1.6 | 1 |
| lineage4.4.1.1 | 4 |
| lineage4.1.2 | 5 |
| lineage4.5 | 3 |
| lineage1.2.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.1 | 2 |
| lineage2.2.1.1 | 2 |
| La1.8.1 | 4 |
| lineage4.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.6.1.1 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.3.4 | 2 |
| lineage3;lineage2.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4 | 5 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.9.1 | 2 |
| lineage4.3.2.1 | 2 |
| lineage3.1.1 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage1.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage3.1 | 2 |
| lineage4;lineage2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 263 |
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4772210 | Other | La1.2 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4798262 | HR-TB | La1 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR5336148 | Other | None | ERR4800341 | Other | lineage3 | None | ERR4808980 | Pre-XDR-TB | lineage2.2.2 | None | ERR6198317 | Other | La1.2 | None | ERR736839 | Other | None | ERR702404 | HR-TB | None | ERR6358837 | HR-TB | None | ERR736835 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR9117709 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | ERR7801239 | Sensitive | lineage4.8.1 | None | ERR7910877 | MDR-TB | lineage4.1.1 | None | ERR8976043 | HR-TB | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9119508 | MDR-TB | lineage4.6.4 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786391 | Sensitive | lineage4.1.2.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9786619 | Sensitive | lineage4.8 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786843 | Other | None | SRR069989 | HR-TB | lineage2 | None | ERR9896144 | Other | lineage3 | None | ERR990545 | Other | lineage3 | None | SRR069981 | HR-TB | lineage2.2.2 | None | ERR9787061 | Sensitive | lineage6.2.3 | None | ERR9787153 | Other | lineage6.1.3 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1011488 | Other | lineage2.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR10993957 | Other | La1.6 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1181136 | Sensitive | lineage2.2 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR13423544 | Other | lineage4.5 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR12416824 | HR-TB | None | SRR11972387 | MDR-TB | lineage2.2.1 | None | SRR13861163 | Sensitive | lineage4.9 | None | SRR13861151 | RR-TB | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13861180 | Other | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861176 | Sensitive | lineage4.9 | None | SRR13861251 | RR-TB | lineage4.9 | None | SRR13861332 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861586 | Other | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR13861666 | Sensitive | lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR13861686 | RR-TB | lineage4.9 | None | SRR15600376 | HR-TB | lineage2.2.1.1 | None | SRR1791696 | Other | La1.8.1 | None | SRR1640750 | HR-TB | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR19303884 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | ERR4815604 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | ERR4815310 | Other | None | SRR3675482 | HR-TB | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | SRR3675465 | HR-TB | None | ERR1198988 | Sensitive | lineage4.6.1.1 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR161033 | HR-TB | None | ERR161125 | Sensitive | lineage4.3.4 | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR161149 | Other | lineage4.3.4.2.1 | mw | ERR4814573 | Other | lineage1.1.3.2 | None | SRR3675221 | HR-TB | None | ERR3275201 | Sensitive | lineage4.8 | nl | SRR3675236 | HR-TB | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR176450 | Sensitive | lineage4.1.1 | None | ERR4815550 | Other | lineage4 | None | SRR3675311 | Other | None | ERR4815752 | Other | lineage4.9 | None | SRR3675383 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | ERR2229542 | Other | lineage4.8 | None | ERR2027263 | Other | lineage4 | None | ERR3275220 | Other | lineage3 | nl | SRR3675572 | Other | None | ERR212001 | HR-TB | None | SRR3675558 | HR-TB | None | ERR2179691 | Sensitive | lineage4.5 | cn | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816585 | Other | lineage2.2 | None | ERR4817735 | Other | lineage4.8 | None | ERR4817847 | Other | lineage4.8 | gb | ERR553132 | MDR-TB | lineage4.1.2.1 | None | ERR4818021 | Other | La1.8.1 | None | SRR7496472 | Other | None | ERR234659 | HR-TB | None | ERR4818139 | Other | lineage4.6.2.2 | gb | ERR245810 | Sensitive | lineage4.9.1 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR245758 | Other | lineage4.9.1 | None | ERR4818258 | Sensitive | lineage4.3.3 | gb | SRR4037619 | Sensitive | lineage4.3.2.1 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR2446570 | Sensitive | lineage4.8 | nl | ERR2446144 | Other | lineage3 | nl | ERR3275215 | Other | lineage4.1.2.1 | nl | ERR4820854 | Other | lineage4.1.2.1 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR5341460 | Other | lineage3 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | SRR5341430 | Other | lineage3 | None | SRR5341333 | HR-TB | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | ERR2517514 | Sensitive | lineage4.8 | None | ERR2517489 | Sensitive | lineage4.1.2.1 | nl | ERR4821053 | Other | lineage3 | None | ERR2517528 | Other | lineage3 | nl | ERR278594 | HR-TB | None | ERR2693239 | HR-TB | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR6045912 | Sensitive | lineage4.3.3 | gb | ERR4821179 | Other | lineage4.1.2.1 | gb | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6045379 | Other | None | SRR6045952 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046237 | Other | lineage4.3.3 | gb | SRR6325442 | HR-TB | None | ERR2843536 | Other | lineage2.2.1 | None | SRR6325444 | HR-TB | None | SRR6046521 | Other | lineage4.4.1.1 | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR4828299 | Other | lineage1.1.1 | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR6046460 | HR-TB | None | SRR6046514 | HR-TB | None | ERR2446118 | Other | lineage4.1.2.1 | nl | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6325448 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR3077978 | Other | lineage1.1 | None | ERR4872102 | MDR-TB | lineage4.6.4 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6982138 | Sensitive | lineage4 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR502494 | Other | lineage5.1.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6982410 | Other | lineage4.8.1 | None | SRR6831950 | Other | lineage4.3.3 | None | SRR6982115 | Sensitive | lineage4 | None | SRR6785227 | Other | lineage2.2.1 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR6785267 | Other | lineage2.2.1 | None | SRR6785262 | Sensitive | lineage4.2.1 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | SRR6785413 | Other | lineage2.2.1 | None | SRR6789626 | Other | None | ERR294248 | HR-TB | None | SRR6981912 | Sensitive | None | SRR6981962 | Sensitive | None | ERR5311081 | HR-TB | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6982070 | RR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5087596 | Other | La1.8.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR5311090 | HR-TB | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | SRR7496517 | Other | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496509 | Other | None | ERR323055 | HR-TB | None | SRR7645800 | MDR-TB | lineage2.2.1 | None | ERR323041 | HR-TB | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | ERR323038 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR1034687 | Sensitive | lineage3 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR3283021 | HR-TB | None | ERR144568 | Pre-XDR-TB | None | ERR3283017 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3283036 | HR-TB | None | ERR3439432 | Other | None | ERR3468544 | HR-TB | None | ERR3797083 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797069 | Other | None | ERR3797082 | Other | lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4187921 | Other | None | ERR4188350 | HR-TB | None |
|---|
