EBG00000313339 - n.242A>C


Drug resistance types
17 Sensitive 30 RR-TB 32 HR-TB 86 MDR-TB 5 Pre-XDR-TB 2 XDR-TB 56 Other
lineage Counts
lineage Count
lineage4.9 27
lineage3 9
La3;M.canetti;lineage4.9 2
M.canetti;lineage2.1;lineage4.9 16
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9 12
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage2.2;lineage4.9 1
lineage4.6.4 2
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.3.2.1 3
lineage2.1;lineage4.9 9
M.canetti;lineage4.9 2
lineage4.1.2.1 18
lineage4.1;lineage4.8 2
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4.1.1.3 7
lineage2.2.2 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.1.2 2
lineage4.6.2.2 4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
lineage4.8 5
lineage4.5 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.2.1 16
lineage5.2 2
lineage2.1;lineage4.9;lineage6.3 3
lineage2.1 1
M.canetti;lineage2.1 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4.9 1
lineage4.3.3 3
M.canetti;lineage2.2 3
lineage2.1;lineage4.9;lineage6.3;lineage8 1
9
lineage6.2.3 1
La1.2.BCG 1
lineage4.4.1.1 2
lineage2.2 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage2.2.1.1 1
La1.8.1 1
lineage4.9;lineage6.3 2
lineage4 2
lineage4.1.3 2
lineage1.2.2.2 2
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage4.1.2.1.1 2
lineage4.8.1 1
lineage4.3.4.2.1 2
lineage1.2.1.2.1 1
La3;M.canetti;lineage3.1 1
lineage2.1;lineage2.2;lineage6.3 1
M.canetti;lineage2.1;lineage4 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.2.1 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage1.1.1 1
lineage2.1;lineage4.3.2 1
La1.2 1
lineage6.1.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1 1
La1.7.1 1
M.canetti;lineage2.1;lineage3 1
La1.7;M.canetti;lineage4.9 1
lineage4.2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.9.1 1
lineage2.1;lineage6.3 1
spoligotype Counts
spoligotype Count
None 228
Geographic prevalence
Country level data for this variant is available for 9 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3797083 RR-TB lineage4.9 None
ERR4821053 RR-TB lineage3 None
SRR5341430 Other lineage3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR9896144 Other lineage3 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2693228 RR-TB lineage4.9 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR4872102 MDR-TB lineage4.6.4 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR13861381 HR-TB lineage4.9 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR9786391 Other lineage4.1.2.1 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2517528 RR-TB lineage3 nl
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SAMEA2533358 MDR-TB lineage4.1.1.3 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR5311096 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1166821 RR-TB lineage4.1.2.1 None
SRR7496472 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR1181085 Sensitive lineage4.1.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR2229143 RR-TB lineage4.9 None
ERR2517489 Sensitive lineage4.1.2.1 nl
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR12708396 MDR-TB lineage4.3.2.1 None
ERR2446570 Sensitive lineage4.8 nl
SRR13423544 Other lineage4.5 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR1181289 RR-TB lineage2.2.1 None
SRR13861304 Other lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3283042 HR-TB lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
SRR3675311 Other lineage4.9 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR12708419 Other lineage4.3.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR9119096 RR-TB lineage4.3.3 None
SRR3675554 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6044925 Sensitive lineage4.9 None
SRR3675572 Other None
ERR234659 HR-TB None
SRR7496517 Other None
ERR9787061 Sensitive lineage6.2.3 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR1181136 Sensitive lineage2.2.1 None
SRR1165506 Other lineage4.1.2.1 None
SRR1173453 Other lineage4.4.1.1 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR550637 MDR-TB lineage4.1.1.3 None
ERR3275201 Sensitive lineage4.8 nl
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR3675482 RR-TB lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
ERR3275220 Other lineage3 nl
SRR15600376 HR-TB lineage2.2.1.1 None
SRR1791696 RR-TB La1.8.1 None
SRR6981912 Sensitive lineage4.3.2.1 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3804169 HR-TB lineage4.1.3 None
SRR6045219 HR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR6785227 Other lineage2.2.1 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR4872094 MDR-TB lineage5.2 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR3675448 Other lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
ERR2446144 Other lineage3 nl
ERR3801503 Other lineage4.6.2.2 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR8665994 RR-TB lineage4.9 None
SRR1173767 MDR-TB lineage4.4.1.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
SRR6044815 RR-TB lineage4.9 None
ERR3275215 RR-TB lineage4.1.2.1 nl
ERR9786611 HR-TB lineage4.1.3 None
SAMN02350446 Sensitive lineage2.2.1 None
SRR12708389 MDR-TB lineage4.8.1 None
ERR4797201 Other lineage1.2.2.2 None
SRR1180137 RR-TB lineage2.2.1 None
SRR1165423 RR-TB lineage4.1.2.1 None
SAMN02414850 Other lineage4.1.2.1 None
ERR3468607 RR-TB lineage4.9 None
SRR13861332 Other lineage4.9 None
ERR4815752 Other lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR1011488 Sensitive lineage2.2.1 None
SRR1510066 RR-TB lineage1.2.1.2.1 None
ERR5908228 RR-TB lineage4.3.3 None
ERR7821163 Other lineage2.2.1 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR3283018 HR-TB lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR2199988 MDR-TB lineage4.1.1.3 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9786843 Other None
SRR1640750 RR-TB None
SRR6789626 Other None
SRR18213713 HR-TB None
ERR212001 HR-TB None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4800341 HR-TB lineage3 None
ERR9786656 Sensitive lineage4.1.2.1 None
ERR9119508 MDR-TB lineage4.6.4 None
SRR3675507 RR-TB lineage4.9 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR3675549 Other lineage4.9 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR9786619 Sensitive lineage4.8 None
SRR13861176 Other lineage4.9 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR1181020 Other lineage2.2.1 None
SRR5341332 Pre-XDR-TB lineage3 None
ERR3283044 Other lineage4 None
ERR990545 RR-TB lineage3 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR760877 MDR-TB lineage4.1.2.1.1 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR14066533 RR-TB lineage1.1.1 None
ERR3797047 MDR-TB lineage4.9 None
SRR6785267 Other lineage2.2.1 None
SRR6982138 Sensitive lineage4.1.1.3 None
SRR1162864 MDR-TB lineage4.1.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR3675450 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR6198317 Other La1.2 None
SRR1181319 Sensitive lineage2.2.1 None
SRR12708392 Other lineage2.2.1 None
ERR9787153 Other lineage6.1.3 None
ERR9786711 Other lineage4.6.2.2 None
SRR3675515 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
ERR3275196 RR-TB lineage2.2.1 nl
SRR7240492 MDR-TB La1.7.1 None
SAMN02585942 Sensitive lineage4.1.2 None
SRR7131023 Other lineage4.1.2.1 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
SRR1165584 Other lineage4.1.2.1 None
SRR7496509 Other None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR2517514 Sensitive lineage4.8 None
SRR6785262 Sensitive lineage4.2.1 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR1167055 Other lineage4.1.2.1 None
ERR2446118 RR-TB lineage4.1.2.1 nl
SRR3675322 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR245758 Other lineage4.9.1 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR1162740 Other lineage4.1.2.1 None