EBG00000313325 - n.855C>T
Drug resistance types
122 Sensitive
3 RR-TB
26 HR-TB
32 MDR-TB
11 Pre-XDR-TB
1 XDR-TB
119 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 4 |
| lineage4.9 | 24 |
| lineage4.3.3 | 13 |
| lineage4.1.2.1 | 22 |
| lineage4.1.1 | 11 |
| lineage2.2.1 | 37 |
| lineage4.4.1.2 | 2 |
| 5 | |
| lineage4.3.4.2 | 4 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.4.2.1 | 9 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.1.1 | 9 |
| lineage1.2.2.2 | 2 |
| lineage4.8.1 | 2 |
| lineage4.6 | 2 |
| lineage4.2.1 | 2 |
| lineage4.3.2 | 1 |
| lineage4.8 | 11 |
| lineage6.1.1 | 2 |
| lineage4.4.1.1 | 3 |
| lineage4.2.2.2 | 4 |
| La1.6 | 3 |
| lineage4.1.1.3 | 3 |
| La1.8.1 | 28 |
| lineage4.3.2.1 | 6 |
| lineage4.1.2 | 8 |
| lineage1.2.1.2.1 | 2 |
| lineage1.1.2 | 4 |
| lineage1.1.3.1 | 5 |
| lineage4.9;lineage1.1 | 1 |
| lineage1.1.3 | 1 |
| lineage4.9;lineage4.4.2 | 1 |
| La1.7.1 | 4 |
| lineage2 | 1 |
| La1.4 | 2 |
| lineage4.3.4.1 | 4 |
| lineage4.4.2 | 2 |
| lineage3.1.1 | 5 |
| lineage3 | 12 |
| lineage3.1.2 | 2 |
| lineage4.5 | 4 |
| lineage1.1.3.2 | 5 |
| lineage4.9.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4;lineage1.2.2.1 | 1 |
| lineage2.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.2 | 1 |
| lineage4.3.2.1;lineage3.1.1 | 1 |
| lineage4.3.3;lineage3 | 1 |
| lineage4.3.1.1 | 1 |
| La3 | 1 |
| lineage4.3.2.1;lineage2.2.1 | 1 |
| lineage3.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage1.1.3.3 | 1 |
| lineage1.1.1.1 | 2 |
| lineage4.1.1.3.1 | 1 |
| lineage4.7 | 1 |
| lineage5.1.1 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage6.3.1 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.3.4.1;lineage1.1.2 | 1 |
| lineage4.1.4 | 1 |
| La1.8 | 1 |
| La1.3 | 5 |
| La1 | 1 |
| La1.2 | 3 |
| lineage2.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 314 |
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6197036 | Other | lineage4 | None | ERR6359064 | Sensitive | lineage4.9 | None | ERR736818 | Sensitive | lineage4.3.3 | None | ERR6865901 | Sensitive | lineage4.1.2.1 | None | ERR6866368 | Sensitive | lineage4.1.2.1 | None | ERR6866821 | Sensitive | lineage4.1.2.1 | None | ERR6865691 | Other | lineage4.1.1 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR736867 | HR-TB | None | ERR773795 | Sensitive | lineage4.3.4.2 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | ERR7801321 | Sensitive | lineage4.3.4.2.1 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR7821140 | Sensitive | lineage2.2.1.1 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR8665802 | MDR-TB | lineage2.2.1 | None | ERR9117681 | Other | lineage4.3.3 | None | ERR7821222 | Sensitive | lineage4.8.1 | None | ERR9786558 | Sensitive | lineage4.3.4.2 | None | ERR9119591 | MDR-TB | lineage4.6 | None | ERR9119683 | Other | lineage4.2.1 | None | ERR9285816 | Sensitive | lineage4.3.3 | None | ERR9786274 | Sensitive | lineage4.3.2 | None | ERR9786538 | Sensitive | lineage4.3.4.2 | None | ERR9117806 | Other | lineage4.8 | None | ERR9786447 | Sensitive | lineage4.1.2.1 | None | SRR1011488 | Other | lineage2.2.1 | None | ERR987766 | HR-TB | lineage4.3.3 | None | ERR9787164 | Sensitive | lineage6.1.1 | None | ERR9787323 | Sensitive | lineage6.1.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10315554 | XDR-TB | lineage4.3.3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049031 | HR-TB | lineage4.9 | None | SRR1049569 | Sensitive | lineage4.2.2.2 | None | SRR1049030 | Pre-XDR-TB | lineage4.9 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | SRR1049568 | Sensitive | lineage4.2.2.2 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR10993936 | Other | La1.6 | None | SRR10869203 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1162841 | MDR-TB | lineage4.3.3 | None | SRR10993953 | Other | La1.6 | None | SRR11294512 | Other | La1.8.1 | None | SRR10993957 | Other | La1.6 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1169150 | MDR-TB | lineage4.4.1.1 | None | SRR1169145 | MDR-TB | lineage4.1.1 | None | SRR11972175 | MDR-TB | lineage2.2.1 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172177 | MDR-TB | lineage4.1.1 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR11972221 | HR-TB | lineage2.2.1 | None | SRR11972283 | MDR-TB | lineage2.2.1 | None | SRR11972390 | MDR-TB | lineage2.2.1 | None | SRR11972264 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR11972378 | MDR-TB | lineage1.1.2 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR12199400 | HR-TB | lineage4.9;lineage1.1 | None | SRR12199410 | Sensitive | lineage1.1.3 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR12199465 | Sensitive | lineage2.2.1.1 | None | SRR13199739 | Other | La1.7.1 | None | SRR124451 | HR-TB | None | SRR12931719 | Other | lineage4.3.4.2 | None | SRR13199738 | Other | La1.7.1 | None | SRR124452 | HR-TB | lineage2 | None | SRR12882699 | Sensitive | lineage1.1.2 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | SRR14782537 | Pre-XDR-TB | lineage2.2.1 | None | SRR16278292 | Other | La1.4 | None | SRR15723110 | Sensitive | lineage2.2.1 | None | SRR14782760 | Sensitive | lineage4.3.4.1 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR1573728 | Sensitive | lineage4.4.2 | None | SRR16278273 | Other | La1.4 | None | SRR19428614 | HR-TB | lineage3.1.1 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR17832798 | Other | lineage3 | None | SRR1792392 | Other | La1.8.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR1735591 | Other | lineage4.1.2.1 | None | SRR1791899 | HR-TB | La1.8.1 | None | SRR1792232 | Other | La1.7.1 | None | SRR1792247 | Other | La1.7.1 | None | SRR1792304 | Other | La1.8.1 | None | SRR18213800 | Other | lineage3.1.2 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR19304029 | Other | lineage4.8 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | SRR2101767 | HR-TB | lineage4.1.2.1 | None | SRR21239778 | Sensitive | lineage4.3.3 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR21240141 | Other | lineage4.3.3 | None | SRR21240038 | Other | lineage4.1.2.1 | None | SRR21240093 | Other | lineage4.1.2.1 | None | SRR21675848 | Other | lineage1.1.3.1 | None | ERR4815103 | Other | lineage3 | None | ERR176771 | Sensitive | None | ERR190332 | Sensitive | lineage4.3.4.1 | None | ERR176780 | Sensitive | lineage4.9 | None | SRR3675474 | Other | lineage4.1.1 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR176811 | Sensitive | lineage4.9.1 | None | ERR1815548 | Other | La1.8.1 | None | ERR161125 | Sensitive | lineage4.3.4 | None | ERR4814524 | Other | lineage4.1.1 | gb | ERR4814763 | Other | lineage2.2.1 | None | ERR163970 | Sensitive | lineage4.6.1.2 | None | ERR181750 | Sensitive | lineage1.1.3.2 | None | ERR176450 | Sensitive | lineage4.1.1 | None | ERR176482 | Sensitive | lineage4.3.4.2.1 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | ERR176619 | Sensitive | lineage4.9 | None | ERR4814874 | MDR-TB | lineage1.1.2 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR4815551 | Other | lineage2.2.1 | None | ERR190388 | Sensitive | lineage4.9 | None | ERR176740 | HR-TB | None | ERR2446456 | HR-TB | lineage4.4.1.1 | None | ERR4815948 | Other | lineage4.8 | None | ERR212042 | HR-TB | lineage3.1.1 | None | ERR212015 | Sensitive | lineage4.8 | None | ERR216986 | Sensitive | lineage4.3.4.2.1 | None | ERR4816283 | Other | lineage4.1.2.1 | None | ERR216910 | Sensitive | lineage4.3.4.2.1 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | ERR4816549 | Other | lineage2.2.1 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | ERR212112 | Sensitive | lineage4;lineage1.2.2.1 | None | ERR216949 | Sensitive | lineage4 | None | ERR4816627 | Other | lineage2.2 | None | ERR221583 | Sensitive | lineage4.1.2 | None | ERR221563 | Sensitive | lineage1.1.3.2 | mw | SRR4033203 | Sensitive | lineage4.9 | None | SAMN02380985 | Sensitive | lineage4.2.2.2 | None | ERR2179816 | Sensitive | lineage4 | None | SRR5074094 | HR-TB | lineage2.2.1.1 | None | ERR2512991 | Other | lineage1.2.1.2.1 | gb | ERR2513056 | HR-TB | lineage4.1.2.1 | gb | ERR2512443 | Other | lineage4.8 | gb | ERR2512536 | Other | lineage3.1.3 | None | SRR5067459 | HR-TB | lineage4.2 | None | ERR4818287 | Other | lineage4.5 | gb | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR2179695 | Sensitive | lineage4.5 | None | ERR245795 | Sensitive | lineage4.3.2.1;lineage3.1.1 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | ERR4818629 | Other | lineage4.3.3;lineage3 | gb | SRR5007155 | HR-TB | lineage4.1.2.1 | None | ERR4818565 | Other | lineage4.8 | None | ERR4819167 | Other | lineage3 | gb | ERR2513738 | Other | lineage1.1.3.1 | None | ERR4820270 | MDR-TB | lineage4.8 | gb | SRR5153236 | MDR-TB | lineage2.2.1 | None | ERR1873555 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341460 | Other | lineage3 | None | SRR5266535 | Pre-XDR-TB | lineage2.2.1 | ru | SAMN02350446 | Sensitive | lineage2.2.1 | None | ERR4819525 | Other | lineage3 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR5341254 | Other | lineage4.2.2.2 | in | SAMN02585942 | Sensitive | lineage4.1.2 | None | ERR4820907 | Other | lineage4.1.2.1 | gb | ERR2693238 | HR-TB | lineage4.9 | None | ERR4820192 | Other | La3 | None | SRR6045516 | Other | lineage3.1.1 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | ERR2660490 | Sensitive | lineage4.3.2.1 | None | ERR2653138 | MDR-TB | lineage4.1.2.1 | None | ERR2660441 | Sensitive | lineage1.1.3.1 | None | ERR2652981 | Sensitive | lineage4.1.2.1 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR2660542 | Sensitive | lineage4.3.2.1;lineage2.2.1 | None | ERR2660536 | Sensitive | lineage2.2.1 | None | ERR4821232 | HR-TB | lineage4.8 | gb | ERR2660545 | Sensitive | lineage4.3.2.1 | None | SRR6045683 | Other | lineage3.1.2 | None | ERR4821958 | Other | lineage4.3.3 | gb | ERR4821551 | Sensitive | lineage4.9 | None | ERR4822240 | Other | lineage4.1.2.1 | gb | ERR4821331 | HR-TB | lineage4.8 | None | SRR6045992 | Other | lineage3 | None | SRR6045778 | Other | lineage3.1 | None | SRR6044904 | Other | lineage3 | None | SRR6044916 | Other | lineage4.1.1 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6045986 | Other | lineage3 | None | SRR6045989 | Other | lineage2.2.1 | gb | SRR6044925 | Sensitive | lineage4.9 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6045138 | Other | lineage3.1.1 | None | SRR6046246 | Other | lineage3 | None | SRR6045321 | Other | lineage1.1.3.1 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6045312 | Other | lineage1.1.3.3 | None | ERR2843536 | Other | lineage2.2.1 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046447 | Sensitive | lineage4.8 | gb | ERR4828559 | Other | lineage1.1.1.1 | None | SRR6046655 | Other | lineage4.1.2.1 | None | SRR6046607 | Other | lineage3 | None | SRR6046481 | Other | lineage4.1.1.3.1 | None | SRR6046790 | Other | lineage4.7 | None | SRR6046767 | RR-TB | lineage2.2.1 | None | ERR4831711 | HR-TB | lineage2.2.1.1 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | SRR6484909 | Sensitive | lineage2.2.1 | None | ERR3077968 | MDR-TB | lineage4.1.2.1 | None | ERR502480 | Other | lineage5.1.1 | None | ERR4872193 | MDR-TB | lineage4.6 | None | SRR6046815 | Other | lineage3 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | ERR4831722 | HR-TB | lineage2.2.1 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | SRR6807688 | Pre-XDR-TB | lineage4.2.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6797751 | MDR-TB | lineage2.2.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR6982371 | Sensitive | lineage4.1.1 | None | SRR6824550 | Sensitive | lineage4.5 | None | SRR6981974 | Sensitive | lineage4.1.2.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6824516 | Sensitive | lineage2.2.1.1 | None | SRR6824603 | Sensitive | lineage4.4.2 | None | SRR6982053 | Sensitive | lineage4.9;lineage4.3.4.1 | None | ERR5311093 | Other | La1.8.1 | None | ERR5087606 | Other | La1.8.1 | None | ERR5311076 | Other | La1.8.1 | None | ERR5087707 | Other | La1.8.1 | None | SRR7131294 | Other | lineage6.3.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | ERR5311088 | Other | La1.8.1 | None | ERR323061 | Sensitive | lineage4.9 | None | SRR8600071 | Other | La1.8.1 | None | ERR323041 | HR-TB | None | DRR184621 | Sensitive | lineage1.1.1.1 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR126603 | Sensitive | lineage4.3.3 | None | ERR3283046 | MDR-TB | lineage4.9 | None | DRR184913 | Sensitive | lineage2.2.1 | None | ERR036200 | Sensitive | lineage4.1.2 | None | ERR036233 | Sensitive | lineage4.3.4.1;lineage1.1.2 | None | ERR037506 | Sensitive | lineage4.3.4.2.1 | None | ERR037535 | Sensitive | lineage4.3.4.2.1 | None | ERR1063855 | Other | lineage4 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR3324348 | Other | lineage1.1.3.2 | None | ERR3324355 | HR-TB | lineage4.1.1.3 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3797007 | Other | La1.8.1 | None | ERR3470682 | Other | lineage3 | None | ERR3324375 | Other | lineage1.1.3.2 | None | ERR4187636 | Other | La1.8.1 | None | ERR4024812 | Sensitive | lineage4.1.2.1 | None | ERR3797013 | Other | La1.8.1 | None | ERR3804154 | Sensitive | lineage4.1.2.1 | None | ERR4024588 | Other | lineage4.1.1 | None | ERR4187645 | Other | La1.8.1 | None | ERR4187869 | Other | La1.8.1 | None | ERR4187800 | Other | La1.8.1 | None | ERR4187819 | Other | La1.8 | None | ERR4187912 | Other | La1.8.1 | None | ERR4187952 | Other | La1.8.1 | None | ERR4187916 | Other | La1.8.1 | None | ERR4188222 | MDR-TB | La1.8.1 | None | ERR4187993 | Other | La1.8.1 | None | ERR4188021 | Other | La1.8.1 | None | ERR4188080 | Other | La1.8.1 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4188375 | Sensitive | lineage4.9 | None | ERR4188381 | Other | La1.8.1 | None | ERR4188395 | Other | La1.8.1 | None | ERR4769428 | Other | La1.3 | None | ERR473298 | Sensitive | lineage4.6.2.2 | None | ERR4769412 | Sensitive | lineage4.9 | None | ERR4627369 | Other | La1.8.1 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769467 | Sensitive | lineage4.9 | None | ERR4769462 | Other | La1.3 | None | ERR4769482 | Sensitive | La1 | None | ERR4769470 | Sensitive | lineage4.9 | None | ERR4769471 | Other | La1.3 | None | ERR4772210 | Other | La1.2 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4769549 | Sensitive | lineage4.9 | None | ERR4769562 | Other | La1.2 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769537 | Sensitive | lineage4.9 | None | ERR4769561 | Other | La1.3 | None | ERR4772218 | Other | La1.2 | None | ERR4812577 | Sensitive | lineage4.3.3 | pe | ERR4796348 | Pre-XDR-TB | lineage2.2.1.2 | None |
|---|
