EBG00000313325 - n.855C>T
Drug resistance types
106 Sensitive
1 RR-TB
17 HR-TB
21 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
53 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 25 |
| lineage1.1.2 | 3 |
| La1.4 | 2 |
| lineage4.2.2.2 | 3 |
| lineage4.9 | 24 |
| lineage4.1.2.1 | 9 |
| lineage2.2.1.1 | 7 |
| La1.8.1 | 23 |
| lineage4.1.1.1 | 1 |
| lineage4.3.3 | 7 |
| lineage6.1.1 | 3 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.4.1 | 5 |
| lineage4.2.2 | 12 |
| lineage3 | 4 |
| lineage4.8 | 3 |
| La1.3 | 3 |
| lineage1.1.3.1 | 2 |
| lineage4.3.4.2.1 | 8 |
| lineage4.1.2.1.1 | 1 |
| lineage4.1.1.3 | 4 |
| lineage1.1.3.2 | 4 |
| lineage4.6.2.2 | 2 |
| La1.2 | 1 |
| La1.6 | 3 |
| lineage1.2.2.2 | 2 |
| lineage4.3.2.1 | 6 |
| lineage1.2.2.1;lineage4 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4.3.4.1;lineage4.9 | 1 |
| La1.8.1;lineage4 | 1 |
| lineage4.5 | 3 |
| lineage4.3.4.2 | 5 |
| La1.7.1 | 3 |
| lineage4.1.2 | 2 |
| lineage4.3.2 | 1 |
| lineage4 | 1 |
| La1.8.1;lineage4.9 | 1 |
| lineage1.1.2;lineage4.3.4.1 | 1 |
| lineage2.2.2;lineage4 | 2 |
| lineage1.1.1.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage3.1.1;lineage4.3.2.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.1.4 | 1 |
| lineage3.1.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.6.1.2 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| M.canetti;lineage2.1 | 1 |
| lineage4.4.2 | 1 |
| lineage1.2.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 206 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR16278292 | Other | La1.4 | None | SRR1049568 | Sensitive | lineage4.2.2.2 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR190388 | Sensitive | lineage4.9 | None | ERR2653138 | MDR-TB | lineage4.1.2.1 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR6824516 | Sensitive | lineage2.2.1.1 | None | SRR11294512 | Other | La1.8.1 | None | SRR6982371 | Sensitive | lineage4.1.1.1 | None | SRR21239778 | Sensitive | lineage4.3.3 | None | ERR1023250 | Sensitive | lineage6.1.1 | None | SRR7069903 | Other | lineage4.1.1.3.1 | None | ERR736818 | Sensitive | lineage4.3.3 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR3559287 | HR-TB | lineage4.2.2 | None | ERR4187916 | Other | La1.8.1 | None | ERR3470682 | Other | lineage3 | None | SRR1792304 | Other | La1.8.1 | None | ERR4187636 | Sensitive | La1.8.1 | None | ERR867555 | Other | lineage3 | None | SRR6797751 | MDR-TB | lineage2.2.1 | None | ERR4769482 | Sensitive | lineage4.9 | None | ERR3559279 | HR-TB | lineage4.2.2 | None | ERR4769467 | Sensitive | lineage4.9 | None | ERR4769506 | Sensitive | lineage4.9 | None | ERR176619 | Sensitive | lineage4.9 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None | ERR4769471 | Other | La1.3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR4188381 | Other | La1.8.1 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR7240148 | Other | La1.8.1 | None | ERR3559276 | HR-TB | lineage4.2.2 | None | SRR7236390 | Other | La1.8.1 | None | ERR216910 | Sensitive | lineage4.3.4.2.1 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR323068 | Sensitive | lineage4.9 | None | SRR1049569 | Sensitive | lineage4.2.2.2 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | SRR10869203 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR6046246 | Other | lineage3 | None | ERR4188213 | Other | La1.8.1 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | SRR11972264 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR473298 | Sensitive | lineage4.6.2.2 | None | ERR4772210 | Other | La1.2 | None | SRR10993957 | Other | La1.6 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR2307498 | HR-TB | lineage2.2.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | DRR184913 | Sensitive | lineage2.2.1 | None | ERR3797007 | Other | La1.8.1 | None | ERR6866821 | Sensitive | lineage4.1.2.1 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR21240141 | Other | lineage4.3.3 | None | ERR212112 | Sensitive | lineage1.2.2.1;lineage4 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | SRR12199468 | Sensitive | lineage4.9 | None | ERR190332 | Sensitive | lineage4.3.4.1 | None | SRR6982053 | Sensitive | lineage4.3.4.1;lineage4.9 | None | ERR5311076 | Other | La1.8.1 | None | ERR3559284 | HR-TB | lineage4.2.2 | None | ERR4769462 | Other | La1.3 | None | SRR10993936 | Other | La1.6 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR3804154 | Sensitive | lineage4.1.2.1 | None | ERR2660490 | Sensitive | lineage4.3.2.1 | None | ERR4187819 | Sensitive | La1.8.1;lineage4 | None | SRR6981993 | Sensitive | lineage4.3.2.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | ERR5087606 | Other | La1.8.1 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | ERR2652981 | Sensitive | lineage4.1.2.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | ERR773795 | Sensitive | lineage4.3.4.2 | None | SRR11972390 | MDR-TB | lineage2.2.1 | None | SRR5074094 | HR-TB | lineage2.2.1.1 | None | SRR1792232 | Other | La1.7.1 | None | SRR1792247 | Other | La1.7.1 | None | ERR216949 | Sensitive | lineage4.3.4.1 | None | ERR4769428 | Sensitive | La1.3 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | ERR4188021 | Other | La1.8.1 | None | SRR12931719 | Other | lineage4.3.4.2 | None | ERR2843536 | Sensitive | lineage2.2.1 | None | ERR9787164 | Sensitive | lineage6.1.1 | None | ERR036200 | Sensitive | lineage4.1.2 | None | ERR176482 | Sensitive | lineage4.3.4.2.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324348 | Other | lineage1.1.3.2 | None | ERR10796559 | Other | lineage4.9 | None | ERR176450 | Sensitive | lineage4.1.1.3 | None | ERR9786274 | Sensitive | lineage4.3.2 | None | ERR1873555 | Pre-XDR-TB | lineage2.2.1 | None | ERR4187869 | Other | La1.8.1 | None | ERR9786447 | Sensitive | lineage4.1.2.1 | None | ERR176771 | Sensitive | lineage4.3.4.2.1 | None | ERR126603 | Sensitive | lineage4.3.3 | None | ERR9786558 | Other | lineage4.3.4.2 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | ERR037506 | Sensitive | lineage4.3.4.2.1 | None | ERR4769549 | Sensitive | lineage4.9 | None | ERR5311086 | Sensitive | lineage4.9 | None | ERR2179816 | Sensitive | lineage4 | None | ERR3559283 | HR-TB | lineage4.2.2 | None | SRR13199739 | Other | La1.7.1 | None | SRR1791899 | Sensitive | La1.8.1;lineage4.9 | None | ERR4187952 | Other | La1.8.1 | None | ERR3559275 | HR-TB | lineage4.2.2 | None | ERR2693238 | Sensitive | lineage4.9 | None | ERR037535 | Sensitive | lineage4.3.4.2.1 | None | SRR6824550 | Sensitive | lineage4.5 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR036233 | Sensitive | lineage1.1.2;lineage4.3.4.1 | None | ERR3324375 | Other | lineage1.1.3.2 | None | SRR1013636 | Sensitive | lineage2.2.2;lineage4 | None | ERR3324355 | Sensitive | lineage4.1.1.3 | None | SRR1011488 | Sensitive | lineage2.2.1 | None | ERR3559286 | HR-TB | lineage4.2.2 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | ERR4769537 | Sensitive | lineage4.9 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR5067459 | HR-TB | lineage4.2.2 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | DRR184621 | Sensitive | lineage1.1.1.1 | None | SRR6044925 | Sensitive | lineage4.9 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | SRR12420276 | MDR-TB | lineage2.2.1 | None | ERR9285816 | Sensitive | lineage4.3.3 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | ERR1815548 | Other | La1.8.1 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | SRR12882699 | Sensitive | lineage1.1.2 | None | ERR9786538 | Sensitive | lineage4.3.4.2 | None | SRR7240147 | Other | La1.8.1 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | ERR3283046 | Sensitive | lineage4.9 | None | ERR3559281 | HR-TB | lineage4.2.2 | None | ERR3559282 | HR-TB | lineage4.2.2 | None | ERR2660545 | Sensitive | lineage4.3.2.1 | None | ERR245795 | Sensitive | lineage3.1.1;lineage4.3.2.1 | None | ERR2660536 | Sensitive | lineage2.2.1 | None | SRR15723110 | Sensitive | lineage2.2.1 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR1238559 | Other | lineage4.9 | None | ERR3324351 | HR-TB | lineage4.1.4 | None | SRR21240038 | Other | lineage4.1.2.1 | None | SRR17832798 | Sensitive | lineage3 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | ERR4188395 | Sensitive | La1.8.1 | None | SRR7240292 | Other | La1.8.1 | None | SRR14782537 | Pre-XDR-TB | lineage2.2.1 | None | ERR181750 | Sensitive | lineage1.1.3.2 | None | ERR5311088 | Sensitive | La1.8.1 | None | ERR13266968 | Sensitive | lineage1.2.2.2 | None | SRR7236233 | Other | La1.8.1 | None | ERR7801321 | Sensitive | lineage4.3.4.2.1 | None | SRR6045516 | Other | lineage3.1.1 | None | SAMN02380985 | Sensitive | lineage4.2.2.2 | None | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR9787323 | Sensitive | lineage6.1.1 | None | ERR323061 | Sensitive | lineage4.9 | None | SRR16278273 | Other | La1.4 | None | ERR1334032 | Other | lineage6.1.3 | None | SRR11972283 | MDR-TB | lineage2.2.1 | None | SRR1013637 | Sensitive | lineage2.2.2;lineage4 | None | ERR2307789 | MDR-TB | lineage2.2.1 | None | ERR4187993 | Sensitive | La1.8.1 | None | SRR7240350 | Other | La1.8.1 | None | ERR163970 | Sensitive | lineage4.6.1.2 | None | ERR3559274 | HR-TB | lineage4.2.2 | None | ERR3559304 | HR-TB | lineage4.2.2 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR4769470 | Sensitive | lineage4.9 | None | SRR10993953 | Other | La1.6 | None | ERR2179695 | Sensitive | lineage4.5 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR21675848 | Other | lineage1.1.3.1 | None | ERR212015 | Sensitive | lineage4.8 | None | SRR6807688 | Pre-XDR-TB | lineage4.2.1 | None | SRR6982448 | Sensitive | lineage2.2.1;lineage4 | None | SRR6045384 | Other | lineage4.1.2.1 | None | SRR1238558 | Other | lineage4.9 | None | SRR1792392 | Other | La1.8.1 | None | ERR323041 | HR-TB | M.canetti;lineage2.1 | None | SRR6824603 | Sensitive | lineage4.4.2 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR12199465 | Sensitive | lineage2.2.1.1 | None | SRR1238557 | Other | lineage4.9 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | SRR8375622 | MDR-TB | lineage1.1.2 | None | SRR14782760 | Sensitive | lineage4.3.4.1 | None | ERR8665802 | MDR-TB | lineage2.2.1 | None | SRR6789621 | Other | lineage4.9 | None |
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