EBG00000313325 - n.852T>A
Drug resistance types
94 Sensitive
2 RR-TB
15 HR-TB
19 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
57 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 25 |
| lineage4.1.1.3 | 3 |
| La1.6 | 3 |
| lineage4.1.2 | 6 |
| La1.8.1 | 26 |
| lineage2.2.1.1 | 7 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.2 | 3 |
| lineage1.1.3 | 1 |
| lineage1.1.3.1 | 3 |
| lineage2 | 1 |
| lineage4.9;lineage4.4.2 | 1 |
| 4 | |
| La1.7.1 | 4 |
| lineage4.3.4.1 | 3 |
| La1.4 | 2 |
| lineage4.4.2 | 2 |
| lineage3 | 3 |
| lineage4.3.3 | 4 |
| lineage4.1.2.1 | 14 |
| lineage3.1.1 | 2 |
| lineage4.5 | 2 |
| lineage2.2 | 2 |
| lineage4.3.4 | 1 |
| lineage4.6.1.2 | 1 |
| lineage1.1.3.2 | 3 |
| lineage4.6.1.1 | 1 |
| lineage4.9 | 14 |
| lineage4.1.1 | 4 |
| lineage4.3.4.2.1 | 5 |
| lineage4 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4.3.2.1;lineage3.1.1 | 1 |
| lineage4.6.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.2 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.3.2.1;lineage2.2.1 | 1 |
| lineage4.4.1.2 | 2 |
| lineage1.1.1.1 | 2 |
| lineage5.1.1 | 2 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage4.1.4 | 1 |
| lineage4.3.4.1;lineage1.1.2 | 1 |
| lineage6.2.2 | 2 |
| La1.8 | 1 |
| lineage4.6.2.2 | 1 |
| La1.3 | 6 |
| La1 | 1 |
| La1.2 | 3 |
| lineage3.1.2.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.4.2 | 3 |
| lineage4.4.1.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage6.1.1 | 1 |
| lineage4.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 196 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR10869203 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10993957 | Other | La1.6 | None | SRR10993936 | Other | La1.6 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR10993953 | Other | La1.6 | None | SRR11294512 | Other | La1.8.1 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR11972264 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972221 | HR-TB | lineage2.2.1 | None | SRR11972283 | MDR-TB | lineage2.2.1 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR11972390 | MDR-TB | lineage2.2.1 | None | SRR11972378 | MDR-TB | lineage1.1.2 | None | SRR12199410 | Sensitive | lineage1.1.3 | None | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR12882699 | Sensitive | lineage1.1.2 | None | SRR12199465 | Sensitive | lineage2.2.1.1 | None | SRR124452 | HR-TB | lineage2 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR124451 | HR-TB | None | SRR13199739 | Other | La1.7.1 | None | SRR13199738 | Other | La1.7.1 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR14782537 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782760 | Sensitive | lineage4.3.4.1 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | SRR18002932 | Pre-XDR-TB | lineage2.2.1 | None | SRR15723110 | Sensitive | lineage2.2.1 | None | SRR16278292 | Other | La1.4 | None | SRR1792232 | Other | La1.7.1 | None | SRR1792392 | Other | La1.8.1 | None | SRR1573728 | Sensitive | lineage4.4.2 | None | SRR16278273 | Other | La1.4 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR17832798 | Other | lineage3 | None | SRR1791899 | HR-TB | La1.8.1 | None | SRR1792247 | Other | La1.7.1 | None | SRR1792304 | Other | La1.8.1 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR2101767 | HR-TB | lineage4.1.2.1 | None | SRR21239778 | Sensitive | lineage4.3.3 | None | SRR19303931 | Other | lineage2.2.1 | None | SRR19428614 | HR-TB | lineage3.1.1 | None | SRR21675848 | Other | lineage1.1.3.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR22424931 | Pre-XDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | ERR161125 | Sensitive | lineage4.3.4 | None | ERR176771 | Sensitive | None | ERR212042 | HR-TB | lineage3.1.1 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR163970 | Sensitive | lineage4.6.1.2 | None | ERR181750 | Sensitive | lineage1.1.3.2 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR190388 | Sensitive | lineage4.9 | None | ERR176450 | Sensitive | lineage4.1.1 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | ERR216949 | Sensitive | lineage4 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | ERR4817102 | Sensitive | None | SRR4033203 | Sensitive | lineage4.9 | None | ERR216986 | Sensitive | lineage4.3.4.2.1 | None | ERR245795 | Sensitive | lineage4.3.2.1;lineage3.1.1 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | SRR5074094 | HR-TB | lineage2.2.1.1 | None | ERR221583 | Sensitive | lineage4.1.2 | None | ERR2179816 | Sensitive | lineage4 | None | SRR5341254 | Other | lineage4.2.2.2 | in | SRR5153236 | MDR-TB | lineage2.2.1 | None | SRR5341460 | Other | lineage3 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR5067459 | HR-TB | lineage4.2 | None | ERR4820862 | Other | lineage2.2.1.1 | None | ERR2660490 | Sensitive | lineage4.3.2.1 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | ERR4820967 | HR-TB | None | ERR2653138 | MDR-TB | lineage4.1.2.1 | None | SRR5341346 | Sensitive | lineage3 | None | ERR2652981 | Sensitive | lineage4.1.2.1 | None | ERR2660441 | Sensitive | lineage1.1.3.1 | None | ERR2660545 | Sensitive | lineage4.3.2.1 | None | ERR2660536 | Sensitive | lineage2.2.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR2660542 | Sensitive | lineage4.3.2.1;lineage2.2.1 | None | ERR4821551 | Sensitive | lineage4.9 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | ERR4828559 | Other | lineage1.1.1.1 | None | SRR6044925 | Sensitive | lineage4.9 | None | ERR2843536 | Other | lineage2.2.1 | None | ERR3077968 | MDR-TB | lineage4.1.2.1 | None | SRR6484909 | Sensitive | lineage2.2.1 | None | ERR4831711 | HR-TB | lineage2.2.1.1 | None | ERR502480 | Other | lineage5.1.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | ERR4831722 | HR-TB | lineage2.2.1 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6981974 | Sensitive | lineage4.1.2.1 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR6982371 | Sensitive | lineage4.1.1 | None | SRR6824516 | Sensitive | lineage2.2.1.1 | None | SRR6824603 | Sensitive | lineage4.4.2 | None | SRR6824550 | Sensitive | lineage4.5 | None | SRR6982053 | Sensitive | lineage4.9;lineage4.3.4.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR5311088 | Other | La1.8.1 | None | ERR5311093 | Other | La1.8.1 | None | ERR5087707 | Other | La1.8.1 | None | ERR5087606 | Other | La1.8.1 | None | ERR5311076 | Other | La1.8.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | ERR323068 | Sensitive | lineage4.9 | None | SRR8600071 | Other | La1.8.1 | None | DRR184621 | Sensitive | lineage1.1.1.1 | None | DRR184913 | Sensitive | lineage2.2.1 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324348 | Other | lineage1.1.3.2 | None | ERR036233 | Sensitive | lineage4.3.4.1;lineage1.1.2 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324355 | HR-TB | lineage4.1.1.3 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3324375 | Other | lineage1.1.3.2 | None | ERR3804140 | Sensitive | lineage6.2.2 | None | ERR3797007 | Other | La1.8.1 | None | ERR3804154 | Sensitive | lineage4.1.2.1 | None | ERR4187645 | Other | La1.8.1 | None | ERR4024588 | Other | lineage4.1.1 | None | ERR4024812 | Sensitive | lineage4.1.2.1 | None | ERR4187636 | Other | La1.8.1 | None | ERR4188021 | Other | La1.8.1 | None | ERR4187952 | Other | La1.8.1 | None | ERR4187800 | Other | La1.8.1 | None | ERR4187819 | Other | La1.8 | None | ERR4187869 | Other | La1.8.1 | None | ERR4187912 | Other | La1.8.1 | None | ERR4187916 | Other | La1.8.1 | None | ERR4187993 | Other | La1.8.1 | None | ERR4188080 | Other | La1.8.1 | None | ERR4188381 | Other | La1.8.1 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4188222 | MDR-TB | La1.8.1 | None | ERR473298 | Sensitive | lineage4.6.2.2 | None | ERR4627369 | Other | La1.8.1 | None | ERR4188395 | Other | La1.8.1 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR4769428 | Other | La1.3 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769412 | Sensitive | lineage4.9 | None | ERR4769470 | Sensitive | lineage4.9 | None | ERR4769467 | Sensitive | lineage4.9 | None | ERR4769462 | Other | La1.3 | None | ERR4769471 | Other | La1.3 | None | ERR4769537 | Sensitive | lineage4.9 | None | ERR4769482 | Sensitive | La1 | None | ERR4769479 | Other | La1.3 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769561 | Other | La1.3 | None | ERR4769549 | Sensitive | lineage4.9 | None | ERR4769562 | Other | La1.2 | None | ERR4772210 | Other | La1.2 | None | ERR4800111 | Sensitive | lineage3.1.2.1 | None | ERR4772218 | Other | La1.2 | None | ERR6865691 | Other | lineage4.1.1 | None | ERR4812577 | Sensitive | lineage4.3.3 | pe | ERR6866821 | Sensitive | lineage4.1.2.1 | None | ERR6865901 | Sensitive | lineage4.1.2.1 | None | ERR6866368 | Sensitive | lineage4.1.2.1 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR7801321 | Sensitive | lineage4.3.4.2.1 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | ERR7801314 | Sensitive | lineage4.3.4.2 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR9119683 | Other | lineage4.2.1 | None | ERR9285816 | Sensitive | lineage4.3.3 | None | ERR9786538 | Sensitive | lineage4.3.4.2 | None | ERR9786447 | Sensitive | lineage4.1.2.1 | None | ERR9787142 | Sensitive | lineage6.2.2 | None | ERR9786558 | Sensitive | lineage4.3.4.2 | None | ERR9787323 | Sensitive | lineage6.1.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1011488 | Other | lineage2.2.1 | None |
|---|
