EBG00000313339 - n.2050T>A
Drug resistance types
132 Sensitive
6 RR-TB
22 HR-TB
16 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.3.1 | 2 |
| lineage4.1.2 | 7 |
| lineage3 | 6 |
| lineage4.4.1.2 | 2 |
| lineage2.2.1 | 29 |
| lineage4.1.1.3 | 3 |
| lineage1.2.2.2 | 3 |
| lineage4.9 | 40 |
| lineage4.6.2.2 | 2 |
| 14 | |
| lineage5.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4 | 3 |
| lineage4.3.4.2.1 | 10 |
| lineage4.8 | 4 |
| lineage4.4.1.1 | 3 |
| lineage4.1.2.1 | 5 |
| lineage2.2 | 3 |
| lineage1.1.3.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.4 | 1 |
| lineage4.3.2.1 | 6 |
| lineage1 | 1 |
| lineage4.1.1 | 8 |
| lineage4.3.4.2 | 3 |
| lineage3.1.1 | 6 |
| lineage4.7 | 1 |
| lineage4.3.3 | 11 |
| lineage4.9;lineage4.3.4.1 | 1 |
| La1.8.1 | 9 |
| lineage4;lineage2 | 1 |
| La2 | 1 |
| lineage4.9.1 | 2 |
| lineage4.3.4.1;lineage1.1.2 | 1 |
| lineage3.1.2.2 | 1 |
| La1.3 | 5 |
| La1 | 1 |
| La1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage2.2.2 | 5 |
| lineage1.1.1 | 2 |
| lineage5.1.4 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.6.1.2;lineage4.4.1.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.9;lineage4.4.2 | 1 |
| lineage2 | 1 |
| lineage1.1.2 | 1 |
| La1.7.1 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.5 | 2 |
| lineage4.3.4 | 1 |
| lineage4.6.1.1 | 3 |
| lineage1.2.2.1 | 1 |
| lineage4.2 | 1 |
| lineage4.3.2.1;lineage3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 229 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2660441 | Sensitive | lineage1.1.3.1 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | SRR5341317 | Pre-XDR-TB | lineage3 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | ERR2843536 | Other | lineage2.2.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR6045205 | Sensitive | lineage4.9 | None | ERR502472 | Other | lineage4.6.2.2 | None | SRR6982078 | Sensitive | None | ERR502484 | Sensitive | lineage4.9 | None | ERR502482 | Sensitive | lineage4.9 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR502480 | Other | lineage5.1.1 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR4831722 | HR-TB | lineage2.2.1 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | SRR6982410 | Other | lineage4.8.1 | None | ERR502497 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | SRR6856087 | Sensitive | lineage4 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6982115 | Sensitive | lineage4 | None | SRR6896340 | HR-TB | lineage4.4.1.1 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR6896348 | Sensitive | lineage4.1.2.1 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6982180 | Sensitive | lineage4.1.1.2 | None | SRR6982196 | Sensitive | None | SRR6982430 | Other | lineage4.3.4.2.1 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR6982198 | HR-TB | lineage1 | None | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6982313 | Sensitive | lineage4.3.4.2.1 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982328 | HR-TB | lineage3.1.1 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR6981912 | Sensitive | None | SRR6855718 | Sensitive | lineage4.8 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6981941 | Sensitive | lineage4.3.4.2.1 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6981962 | Sensitive | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6982026 | Sensitive | lineage4.3.3 | None | SRR6981981 | Other | lineage4.3.3 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR6981983 | Sensitive | lineage3.1.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6982014 | Other | lineage4.1.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6824624 | Sensitive | lineage2.2.1 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6982070 | RR-TB | None | SRR6982053 | Sensitive | lineage4.9;lineage4.3.4.1 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6982405 | Sensitive | None | SRR6982075 | Sensitive | lineage3 | None | ERR5162133 | Other | La1.8.1 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | ERR323036 | HR-TB | None | ERR5311088 | Other | La1.8.1 | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | SRR6982558 | Other | lineage4.3.4.2 | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | SRR8600069 | Other | La1.8.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR019572 | HR-TB | lineage2.2.1 | ru | ERR323068 | Sensitive | lineage4.9 | None | ERR323061 | Sensitive | lineage4.9 | None | DRR120409 | HR-TB | La2 | None | ERR036191 | Sensitive | lineage4.9.1 | None | ERR036242 | Sensitive | lineage4.3.4.2.1 | None | ERR036233 | Sensitive | lineage4.3.4.1;lineage1.1.2 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | ERR037501 | Sensitive | lineage4.3.4.2.1 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR1034765 | HR-TB | lineage4.3.3 | None | ERR1082121 | Sensitive | lineage4.9 | None | ERR108424 | Sensitive | lineage4.8 | None | ERR144568 | Pre-XDR-TB | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR4188202 | Other | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR4187921 | Other | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4188375 | Sensitive | lineage4.9 | None | ERR4188372 | RR-TB | La1.8.1 | None | ERR4627369 | Other | La1.8.1 | None | ERR4188381 | Other | La1.8.1 | None | ERR4627379 | Other | La1.8.1 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR473341 | Sensitive | lineage4.1.1.3 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4769428 | Other | La1.3 | None | ERR4769462 | Other | La1.3 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769470 | Sensitive | lineage4.9 | None | ERR4769471 | Other | La1.3 | None | ERR4769482 | Sensitive | La1 | None | ERR4769505 | Other | lineage4.9 | None | ERR4769467 | Sensitive | lineage4.9 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR4772210 | Other | La1.2 | None | ERR4769549 | Sensitive | lineage4.9 | None | ERR6397161 | Other | lineage4.2.2.2 | None | ERR4772207 | Other | La1.3 | None | ERR5987345 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865119 | MDR-TB | lineage2.2.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR6397155 | HR-TB | lineage3 | None | ERR718268 | Sensitive | lineage1.1.1 | None | ERR702423 | Sensitive | lineage5.1.4 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR736816 | Other | lineage4.9 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR779662 | Sensitive | lineage3.1.1 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | ERR779661 | Sensitive | lineage4.3.4.2.1 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR9285816 | Sensitive | lineage4.3.3 | None | SRR1011488 | Other | lineage2.2.1 | None | SRR10851629 | Sensitive | lineage4.3.3 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | SRR1181136 | Sensitive | lineage2.2 | None | SRR1140691 | HR-TB | lineage4.6.1.2;lineage4.4.1.1 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR1173848 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972438 | HR-TB | lineage1.1.1 | None | SRR11972212 | MDR-TB | lineage2.2.1.1 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR124452 | HR-TB | lineage2 | None | SRR124451 | HR-TB | None | SRR12199465 | Sensitive | lineage2.2.1.1 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR15368914 | MDR-TB | lineage2.2.1 | None | SRR124453 | HR-TB | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR1792232 | Other | La1.7.1 | None | SRR19576436 | Sensitive | None | SRR1792247 | Other | La1.7.1 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR2101689 | Other | lineage4.3.4.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR22424905 | RR-TB | lineage4.9 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR22175227 | Pre-XDR-TB | lineage3 | None | ERR176771 | Sensitive | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | ERR2179785 | Sensitive | lineage4.5 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | SRR3105736 | Other | lineage1.2.2.2 | None | ERR161125 | Sensitive | lineage4.3.4 | None | ERR1198988 | Sensitive | lineage4.6.1.1 | None | ERR1873463 | MDR-TB | lineage2.2.2 | None | ERR176450 | Sensitive | lineage4.1.1 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | ERR1873561 | Pre-XDR-TB | lineage2.2.2 | None | ERR212042 | HR-TB | lineage3.1.1 | None | SRR4033190 | HR-TB | lineage4.9 | None | ERR245662 | Sensitive | lineage1.2.2.1 | None | ERR2179737 | HR-TB | lineage4.2 | None | ERR2245378 | Other | lineage3.1.1 | no | SRR4034769 | Other | lineage4.1.1 | None | SRR4034393 | MDR-TB | lineage4.1.2.1 | None | ERR245716 | Sensitive | lineage2.2.1 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR1199001 | Sensitive | lineage4.6.1.1 | None | ERR245846 | Sensitive | lineage2.2.1 | None | ERR4819125 | Other | lineage2.2.1 | gb | SRR5341460 | Other | lineage3 | None | ERR245740 | Sensitive | lineage4.1.2 | None | ERR245795 | Sensitive | lineage4.3.2.1;lineage3.1.1 | None | ERR245810 | Sensitive | lineage4.9.1 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR5341430 | Other | lineage3 | None |
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