EBG00000313339 - n.2196C>T


Drug resistance types
93 Sensitive 0 RR-TB 6 HR-TB 8 MDR-TB 9 Pre-XDR-TB 0 XDR-TB 53 Other
lineage Counts
lineage Count
lineage2.2.2 9
lineage4.9 77
lineage4.3.3 1
lineage2.2.1 13
lineage4.3.4.1 3
lineage3.1.1 4
lineage4.3.4.2.1 11
lineage4 1
lineage4.1.2 7
lineage1.1.3.1 1
lineage4.9.1 3
lineage1.1.1 2
lineage4.1.1.3 3
lineage5.1.1 1
lineage4.1.2.1.1 1
lineage2.2.2;lineage4.9 1
lineage1.2.2.2 2
lineage4.1.2.1 1
lineage1.2.2.1 1
lineage1.2.1.2.1 1
M.canetti;lineage2.1 1
lineage4.3.4.1;lineage4.9 1
lineage4.6.1.1 1
lineage3 5
lineage1.1.2 1
lineage4.3.4.2 1
lineage4.2.2.2 1
lineage1.1.3.2 2
lineage4.4.1.2 1
lineage4.8 3
lineage3.1.1;lineage4.3.2.1 1
La1.2 1
La3;M.canetti;lineage2.1;lineage4.9 1
lineage5.1.4 1
lineage1.1.2;lineage4.3.4.1 1
lineage4.4.1.1 1
La1.8.1 1
lineage4.3.2.1 1
La1.7.1 1
spoligotype Counts
spoligotype Count
None 169
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR6052085 Pre-XDR-TB lineage2.2.2 None
SRR1183674 Other lineage4.9 None
SRR1180119 Other lineage4.9 None
ERR9285816 Sensitive lineage4.3.3 None
ERR736805 Sensitive lineage2.2.1 None
SRR1180696 Other lineage4.9 None
ERR1034638 Pre-XDR-TB lineage2.2.1 None
ERR216930 Sensitive lineage4.3.4.1 None
ERR181940 Sensitive lineage3.1.1 None
SRR1180729 Sensitive lineage4.9 None
ERR176475 Sensitive lineage4.3.4.2.1 None
ERR161125 Sensitive lineage4 None
SRR3725594 Sensitive lineage4.9 None
SRR1180237 Sensitive lineage4.1.2 None
SRR12199461 Sensitive lineage1.1.3.1 None
ERR161184 Sensitive lineage4.3.4.2.1 None
ERR216928 Other lineage4.9.1 None
ERR036191 Sensitive lineage4.9.1 None
ERR216901 Other lineage3.1.1 None
ERR5758436 Other lineage2.2.2 None
ERR323068 Sensitive lineage4.9 None
ERR751729 Other lineage1.1.1 None
SRR1183315 Other lineage4.9 None
ERR8025664 Pre-XDR-TB lineage4.1.1.3 None
SRR1183292 Sensitive lineage4.9 None
ERR133816 MDR-TB lineage2.2.1 None
ERR502480 Other lineage5.1.1 None
ERR760877 MDR-TB lineage4.1.2.1.1 None
SRR1183307 Other lineage4.9 None
SRR3725593 Sensitive lineage4.9 None
SRR124452 Sensitive lineage2.2.2;lineage4.9 None
ERR221608 Sensitive lineage1.2.2.2 None
SRR3725599 Sensitive lineage4.9 None
ERR245810 Sensitive lineage4.9.1 None
SRR1180803 Other lineage4.9 None
SRR1182976 Other lineage4.9 None
ERR108476 Sensitive lineage4.1.2.1 None
ERR245662 Sensitive lineage1.2.2.1 None
SRR1181587 Other lineage4.9 None
SRR1181519 Sensitive lineage4.9 None
ERR4769512 Sensitive lineage4.9 None
SRR1183290 Other lineage4.9 None
SRR1180062 Other lineage4.9 None
SRR26112553 Sensitive lineage1.2.1.2.1 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
SRR12199400 Sensitive lineage4.9 None
ERR9806988 Pre-XDR-TB lineage4.1.1.3 None
SRR6982053 Sensitive lineage4.3.4.1;lineage4.9 None
SRR124451 Sensitive lineage2.2.2 None
ERR176547 Sensitive lineage4.6.1.1 None
ERR161173 Sensitive lineage4.3.4.2.1 None
SAMN02350409 Pre-XDR-TB lineage2.2.1 None
ERR163988 Sensitive lineage4.1.2 None
ERR245716 Sensitive lineage2.2.1 None
ERR6397155 HR-TB lineage3 None
ERR212033 Other lineage4.9 None
SRR12882699 Sensitive lineage1.1.2 None
ERR1063882 Sensitive lineage4.3.4.2 None
SRR5341430 Other lineage3 None
ERR3470682 Other lineage3 None
ERR1873463 MDR-TB lineage2.2.2 None
SRR3725591 Sensitive lineage4.9 None
ERR987719 HR-TB lineage3 None
SRR3725590 Sensitive lineage4.9 None
SRR1183388 Other lineage4.9 None
ERR212042 HR-TB lineage3.1.1 None
SRR1183720 Other lineage4.9 None
SRR1182883 Other lineage4.9 None
ERR6397161 Other lineage4.2.2.2 None
SRR1062859 Sensitive lineage2.2.1 None
ERR1873549 Pre-XDR-TB lineage2.2.2 None
ERR1063855 Other lineage4.9 None
ERR176781 Sensitive lineage1.1.3.2 None
ERR736822 Sensitive lineage4.4.1.2 None
SRR1180717 Other lineage4.9 None
SRR5341460 Other lineage3 None
SRR6789621 Other lineage4.9 None
ERR245846 Sensitive lineage2.2.1 None
SRR1062851 MDR-TB lineage4.8 None
ERR216949 Sensitive lineage4.3.4.1 None
SRR1181085 Sensitive lineage4.1.2 None
ERR245795 Sensitive lineage3.1.1;lineage4.3.2.1 None
ERR212109 Sensitive lineage1.2.2.2 None
ERR037501 Sensitive lineage4.3.4.2.1 None
SRR1183694 Sensitive lineage4.9 None
SRR1182953 Other lineage4.9 None
ERR036242 Sensitive lineage4.3.4.2.1 None
SRR1182885 Other lineage4.9 None
SRR3725592 Sensitive lineage4.9 None
SRR2101774 Sensitive lineage2.2.1 None
SRR1181242 Sensitive lineage4.1.2 None
SRR1183495 Other lineage4.9 None
ERR4772210 Other La1.2 None
SRR3725597 Sensitive lineage4.9 None
ERR323048 Sensitive lineage4.9 None
ERR473303 Sensitive lineage4.9 None
ERR473278 Sensitive lineage4.9 None
SRR1181277 Other lineage4.9 None
SRR1183294 Sensitive lineage4.9 None
SRR6044925 Sensitive lineage4.9 None
ERR323061 Sensitive lineage4.9 None
ERR473304 Sensitive lineage2.2.1 None
SRR1181176 Other lineage4.9 None
SRR1181590 Sensitive lineage4.9 None
SRR1183237 Other lineage4.9 None
SRR3725588 Sensitive lineage4.9 None
SRR3725596 Sensitive lineage4.9 None
SRR1183499 Other lineage4.9 None
SRR1181199 Other lineage4.9 None
SRR3725586 Sensitive lineage4.9 None
SRR1183410 Other lineage4.9 None
ERR161045 Sensitive lineage4.3.4.2.1 None
ERR736808 Sensitive lineage2.2.1 None
SRR3725587 Sensitive lineage4.9 None
ERR176450 Sensitive lineage4.1.1.3 None
ERR245764 HR-TB lineage3.1.1 None
ERR176780 Sensitive lineage4.9 None
ERR718268 Sensitive lineage1.1.1 None
SRR1011480 MDR-TB lineage4.8 None
SRR4033203 Sensitive lineage4.9 None
SRR1183097 Other lineage4.9 None
SRR1181392 Other lineage4.9 None
ERR181750 Sensitive lineage1.1.3.2 None
SRR3725585 Sensitive lineage4.9 None
SRR1183451 Sensitive lineage4.9 None
SRR1180046 Other lineage4.9 None
SRR1062820 Pre-XDR-TB lineage2.2.1 None
SRR3725595 Sensitive lineage4.9 None
ERR181749 Sensitive lineage4.3.4.2.1 None
ERR161014 Sensitive lineage4.3.4.2.1 None
ERR161150 Sensitive lineage4.3.4.2.1 None
SAMN02350437 MDR-TB lineage4.8 None
ERR190339 Sensitive lineage4.3.4.2.1 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1183018 Other lineage4.9 None
SRR1180061 Other lineage4.9 None
SRR1181377 Other lineage4.9 None
SRR124453 HR-TB lineage2.2.2 None
ERR702423 Sensitive lineage5.1.4 None
ERR036233 Sensitive lineage1.1.2;lineage4.3.4.1 None
SRR1181200 Sensitive lineage4.9 None
ERR176739 Sensitive lineage4.4.1.1 None
SRR1183680 Other lineage4.9 None
SRR1182965 Other lineage4.9 None
SAMN02350446 Sensitive lineage2.2.1 None
ERR6052110 Pre-XDR-TB lineage2.2.2 None
ERR1873461 Pre-XDR-TB lineage2.2.2 None
SRR1183517 Other lineage4.9 None
SRR3725589 Sensitive lineage4.9 None
SRR1180758 Sensitive lineage4.9 None
SRR1183619 Other lineage4.9 None
ERR190332 Sensitive lineage4.3.4.1 None
SRR1183277 Other lineage4.9 None
SRR1180125 Other lineage4.9 None
SRR1011488 Sensitive lineage2.2.1 None
ERR1873437 HR-TB lineage2.2.2 None
SRR1180106 Other lineage4.9 None
SRR1182994 Sensitive lineage4.1.2 None
SRR1181581 Sensitive lineage4.9 None
SAMN02585942 Sensitive lineage4.1.2 None
SRR10482948 Other La1.8.1 None
ERR245740 Sensitive lineage4.1.2 None
SRR1181245 Other lineage4.9 None
SRR1182929 Other lineage4.9 None
SRR6982099 Sensitive lineage4.3.4.2.1 None
SRR6982213 Sensitive lineage4.3.2.1 None
SRR1792247 Other La1.7.1 None
SRR1180021 Sensitive lineage4.9 None
SRR1181495 Sensitive lineage4.9 None