EBG00000313339 - n.2196C>T
Drug resistance types
92 Sensitive
0 RR-TB
6 HR-TB
8 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
53 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 5 |
| lineage4.9 | 77 |
| lineage4.3.3 | 1 |
| lineage2.2.1 | 12 |
| lineage4.3.4.2 | 1 |
| lineage4.3.4.2.1 | 11 |
| lineage1.1.1 | 2 |
| lineage4.8 | 3 |
| lineage4 | 1 |
| lineage2.2.2 | 9 |
| lineage4.1.2 | 7 |
| lineage1.1.3.2 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.9.1 | 3 |
| La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage3.1.1;lineage4.3.2.1 | 1 |
| lineage2.2.2;lineage4.9 | 1 |
| lineage1.2.2.2 | 2 |
| lineage5.1.4 | 1 |
| lineage1.1.2;lineage4.3.4.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| La1.7.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage3.1.1 | 4 |
| lineage4.3.4.1 | 3 |
| lineage5.1.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage1.2.2.1 | 1 |
| M.canetti;lineage2.1 | 1 |
| La1.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.2.1 | 1 |
| La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 168 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6397155 | HR-TB | lineage3 | None | SRR1181495 | Sensitive | lineage4.9 | None | ERR9285816 | Sensitive | lineage4.3.3 | None | SRR1183237 | Other | lineage4.9 | None | SRR3725588 | Sensitive | lineage4.9 | None | SRR3725596 | Sensitive | lineage4.9 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | ERR3470682 | Other | lineage3 | None | ERR161045 | Sensitive | lineage4.3.4.2.1 | None | ERR718268 | Sensitive | lineage1.1.1 | None | SRR1011480 | MDR-TB | lineage4.8 | None | ERR161125 | Sensitive | lineage4 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1183097 | Other | lineage4.9 | None | ERR1873549 | Pre-XDR-TB | lineage2.2.2 | None | SRR1181392 | Other | lineage4.9 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | SRR3725585 | Sensitive | lineage4.9 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR161184 | Sensitive | lineage4.3.4.2.1 | None | SRR1180717 | Other | lineage4.9 | None | ERR036191 | Sensitive | lineage4.9.1 | None | SRR5341460 | Other | lineage3 | None | ERR5758436 | Other | lineage2.2.2 | None | SRR6789621 | Other | lineage4.9 | None | ERR181749 | Sensitive | lineage4.3.4.2.1 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR751729 | Other | lineage1.1.1 | None | ERR245846 | Sensitive | lineage2.2.1 | None | SRR1062851 | MDR-TB | lineage4.8 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR323036 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR245795 | Sensitive | lineage3.1.1;lineage4.3.2.1 | None | ERR037501 | Sensitive | lineage4.3.4.2.1 | None | SRR1183694 | Sensitive | lineage4.9 | None | SRR124452 | Sensitive | lineage2.2.2;lineage4.9 | None | SRR1181377 | Other | lineage4.9 | None | SRR1182953 | Other | lineage4.9 | None | ERR221608 | Sensitive | lineage1.2.2.2 | None | SRR124453 | HR-TB | lineage2.2.2 | None | ERR702423 | Sensitive | lineage5.1.4 | None | ERR245810 | Sensitive | lineage4.9.1 | None | ERR036233 | Sensitive | lineage1.1.2;lineage4.3.4.1 | None | SRR1180803 | Other | lineage4.9 | None | ERR036242 | Sensitive | lineage4.3.4.2.1 | None | SRR1181587 | Other | lineage4.9 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR1183495 | Other | lineage4.9 | None | ERR4769512 | Sensitive | lineage4.9 | None | SRR1183290 | Other | lineage4.9 | None | SRR1182965 | Other | lineage4.9 | None | SRR1180062 | Other | lineage4.9 | None | SRR26112553 | Sensitive | lineage1.2.1.2.1 | None | SRR3725589 | Sensitive | lineage4.9 | None | SRR12199400 | Sensitive | lineage4.9 | None | SRR3725597 | Sensitive | lineage4.9 | None | SRR6982053 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR1181581 | Sensitive | lineage4.9 | None | ERR163988 | Sensitive | lineage4.1.2 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | ERR245740 | Sensitive | lineage4.1.2 | None | SRR1183294 | Sensitive | lineage4.9 | None | SRR1182929 | Other | lineage4.9 | None | SRR1792247 | Other | La1.7.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | SRR1183674 | Other | lineage4.9 | None | SRR1181176 | Other | lineage4.9 | None | SRR1180696 | Other | lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | SRR1183499 | Other | lineage4.9 | None | SRR1181199 | Other | lineage4.9 | None | SRR5341430 | Other | lineage3 | None | SRR3725586 | Sensitive | lineage4.9 | None | SRR1183410 | Other | lineage4.9 | None | ERR736808 | Sensitive | lineage2.2.1 | None | ERR1873463 | MDR-TB | lineage2.2.2 | None | SRR3725587 | Sensitive | lineage4.9 | None | ERR176450 | Sensitive | lineage4.1.1.3 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR176780 | Sensitive | lineage4.9 | None | SRR3725590 | Sensitive | lineage4.9 | None | SRR1183388 | Other | lineage4.9 | None | ERR212042 | HR-TB | lineage3.1.1 | None | SRR1183720 | Other | lineage4.9 | None | SRR1182883 | Other | lineage4.9 | None | ERR181750 | Sensitive | lineage1.1.3.2 | None | ERR216928 | Other | lineage4.9.1 | None | SRR1180046 | Other | lineage4.9 | None | ERR216901 | Other | lineage3.1.1 | None | SRR1062820 | Pre-XDR-TB | lineage2.2.1 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | SRR1183315 | Other | lineage4.9 | None | SRR1183018 | Other | lineage4.9 | None | SRR1183292 | Sensitive | lineage4.9 | None | ERR216949 | Sensitive | lineage4.3.4.1 | None | ERR502480 | Other | lineage5.1.1 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR1183307 | Other | lineage4.9 | None | SRR3725593 | Sensitive | lineage4.9 | None | SRR1180061 | Other | lineage4.9 | None | SRR1182976 | Other | lineage4.9 | None | SRR1181200 | Sensitive | lineage4.9 | None | ERR176739 | Sensitive | lineage4.4.1.1 | None | ERR245662 | Sensitive | lineage1.2.2.1 | None | SRR1182885 | Other | lineage4.9 | None | SRR3725592 | Sensitive | lineage4.9 | None | SRR1183680 | Other | lineage4.9 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR323041 | MDR-TB | M.canetti;lineage2.1 | None | ERR4772210 | Other | La1.2 | None | ERR190332 | Sensitive | lineage4.3.4.1 | None | ERR473303 | Sensitive | lineage4.9 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR473278 | Sensitive | lineage4.9 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | ERR323061 | Sensitive | lineage4.9 | None | SRR1180021 | Sensitive | lineage4.9 | None | ERR473304 | Sensitive | lineage2.2.1 | None | SRR1180119 | Other | lineage4.9 | None | SRR1181590 | Sensitive | lineage4.9 | None | ERR736805 | Sensitive | lineage2.2.1 | None | SRR12882699 | Sensitive | lineage1.1.2 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | ERR181940 | Sensitive | lineage3.1.1 | None | SRR3725591 | Sensitive | lineage4.9 | None | SRR1180729 | Sensitive | lineage4.9 | None | ERR987719 | HR-TB | lineage3 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | SRR3725594 | Sensitive | lineage4.9 | None | SRR4033203 | Sensitive | lineage4.9 | None | ERR6397161 | Other | lineage4.2.2.2 | None | ERR1063855 | Other | lineage4.9 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR1183451 | Sensitive | lineage4.9 | None | SRR3725595 | Sensitive | lineage4.9 | None | ERR161150 | Sensitive | lineage4.3.4.2.1 | None | SAMN02350437 | MDR-TB | lineage4.8 | None | ERR8025664 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | SRR3725599 | Sensitive | lineage4.9 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1181519 | Sensitive | lineage4.9 | None | ERR1873461 | Pre-XDR-TB | lineage2.2.2 | None | SRR1183517 | Other | lineage4.9 | None | SRR1180758 | Sensitive | lineage4.9 | None | SRR1183619 | Other | lineage4.9 | None | SRR1183277 | Other | lineage4.9 | None | SRR1180125 | Other | lineage4.9 | None | SRR1011488 | Sensitive | lineage2.2.1 | None | ERR9806988 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR323048 | Sensitive | lineage4.9 | None | SRR124451 | Sensitive | lineage2.2.2 | None | ERR1873437 | HR-TB | lineage2.2.2 | None | SRR1180106 | Other | lineage4.9 | None | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | SAMN02350409 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181277 | Other | lineage4.9 | None | SRR10482948 | Other | La1.8.1 | None | SRR1181245 | Other | lineage4.9 | None | SRR6044925 | Sensitive | lineage4.9 | None |
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