EBG00000313339 - n.2950C>T


Drug resistance types
130 Sensitive 26 RR-TB 12 HR-TB 31 MDR-TB 15 Pre-XDR-TB 0 XDR-TB 114 Other
lineage Counts
lineage Count
lineage2.2.1 69
lineage3 11
La1.8.1 16
lineage3.1.1 3
lineage4.2.2.2 2
lineage4.3.4.2.1 17
lineage4.3.3 12
lineage2.2.1;lineage4.9 2
lineage3.1;lineage4.1.2 1
lineage4.1.1.1 5
lineage1.1.1.1 2
lineage4.4.1.1 13
lineage4.8 11
lineage4.9 62
La1.8.X-unk6 1
1
lineage1.2.2.1;lineage4 1
lineage3.1.2.1 3
lineage5.1.1 2
lineage2.2.2 3
lineage4.1.1.3 6
lineage4.1.2 10
lineage4.1.2.1 5
lineage6.1.1 1
lineage4.3.2.1 8
lineage4.1.3 1
lineage4.2.2 1
lineage4.2.1 3
lineage4.3.4.1 6
lineage4.1.2.1;lineage4.9 1
lineage4.6.5 1
lineage4.7 2
lineage4.1.1.3;lineage4.9 1
lineage4.1.2.1;lineage4.4.1.1 1
lineage4.6.1.1 1
lineage1 1
La1.2.BCG 2
lineage4.4.1.2 2
lineage4.3.2.1;lineage4.9 1
lineage1.1.2 1
lineage4.8.1 2
lineage4.2.1.1;lineage4.3.3 1
lineage2.2.1;lineage4 1
lineage4.2.2.1 1
lineage4 2
La1.7.1 1
La2 1
lineage4.1.2.1.1 1
lineage1.2.1.2 1
La1.6 3
lineage3.1.1;lineage4.9 1
La1.4 1
La1.2 2
lineage1.1.3.2 2
lineage4.4.1.1.1 1
lineage4.3.3;lineage4.9 1
lineage4.6.2.2 2
lineage4.1.1 1
lineage4.1.2.1;lineage4.4.1 1
lineage4.9;lineage5.1.1 1
lineage1.2.1.1 1
lineage2.2.1.1 2
lineage4.5 1
lineage3.1.2.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9 1
lineage3;lineage4 1
lineage4.4.2 1
lineage1.2.1.2.1 1
spoligotype Counts
spoligotype Count
None 328
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR10315556 Sensitive lineage2.2.1 None
SRR1173281 Other lineage3 None
ERR3797007 Other La1.8.1 None
SRR6982484 Other lineage3.1.1 None
ERR4818831 Other lineage3 None
SRR7236330 Other La1.8.1 None
ERR867538 Other lineage4.2.2.2 None
SRR16295765 Other lineage2.2.1 None
ERR2660498 Sensitive lineage4.3.4.2.1 None
ERR4821679 Other lineage4.3.3 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR2101625 Other lineage3.1;lineage4.1.2 None
SRR6982011 Sensitive lineage4.1.1.1 None
DRR099689 Sensitive lineage1.1.1.1 None
SRR6982090 RR-TB lineage4.4.1.1 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
SRR2101681 Sensitive lineage4.8 None
SRR1173770 Other lineage4.9 None
SRR7240420 Other La1.8.X-unk6 None
SRR16295817 Other lineage2.2.1 None
SRR1792265 Other La1.8.1 None
SRR2101617 Sensitive lineage4.1.1.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR6982106 Sensitive lineage4.8 None
SRR7444098 Sensitive lineage4.9 None
ERR867569 Other lineage4.9 None
SRR7504776 Sensitive lineage4.9 None
SRR16295775 Other lineage2.2.1 None
SRR16295743 Other lineage2.2.1 None
SRR6982196 Sensitive None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR7240324 Other La1.8.1 None
SRR6982043 Sensitive lineage4.4.1.1 None
ERR212100 Sensitive lineage1.2.2.1;lineage4 None
ERR4820798 Other lineage3.1.2.1 gb
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR1082134 Sensitive lineage5.1.1 None
ERR4769518 Sensitive lineage4.9 None
SRR7444074 Sensitive lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
SRR16295769 Other lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR5152926 MDR-TB lineage2.2.1 None
ERR2660499 Sensitive lineage4.1.1.3 None
SRR2101786 Sensitive lineage4.4.1.1 None
ERR4769419 Sensitive lineage4.9 None
SRR6981968 Sensitive lineage4.1.2 None
SRR6982195 Sensitive lineage4.4.1.1 None
SRR21240055 Other lineage4.1.2.1 None
ERR1023250 Sensitive lineage6.1.1 None
SRR7444072 Sensitive lineage4.9 None
SRR16295772 Other lineage2.2.1 None
SRR7069391 Other lineage4.9 None
SRR7504786 Sensitive lineage4.9 None
SRR7240398 Other La1.8.1 None
SRR2101540 Sensitive lineage4.3.2.1 None
SRR6046117 Other lineage4.9 None
ERR4816322 Other lineage4.9 None
SRR16295773 Other lineage2.2.1 None
ERR867575 Other lineage4.9 None
SRR6896178 Sensitive lineage2.2.1 None
SRR10851629 Sensitive lineage4.3.3 None
ERR3335798 MDR-TB lineage2.2.1 None
SRR16295744 Other lineage2.2.1 None
ERR867573 Other lineage4.9 None
SRR11342671 RR-TB lineage4.1.3 None
DRR188816 Other lineage4.2.2 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
SRR7236233 Other La1.8.1 None
SRR6982148 Sensitive lineage2.2.1 None
SRR16295811 Other lineage2.2.1 None
SRR6257046 Pre-XDR-TB lineage2.2.1 None
SRR1180237 Sensitive lineage4.1.2 None
ERR2653138 MDR-TB lineage4.1.2.1 None
ERR978765 RR-TB lineage4.8 None
SRR1140736 Other lineage4.1.2.1 None
SRR6982076 Sensitive lineage4.9 None
ERR867554 Other lineage4.3.4.1 None
SRR7504772 Sensitive lineage4.9 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
ERR161014 Sensitive lineage4.3.4.2.1 None
ERR502478 RR-TB lineage4.9 None
SRR16295763 Other lineage2.2.1 None
ERR4188213 Other La1.8.1 None
SRR6981981 Sensitive lineage4.3.3 None
SRR16295819 Other lineage2.2.1 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
ERR4188253 Other La1.8.1 None
ERR161170 Sensitive lineage4.3.4.1 None
SRR17856664 Sensitive lineage3 None
SRR16295766 Other lineage2.2.1 None
SRR6855915 Sensitive lineage4.9 None
SRR6855721 Sensitive lineage4.3.2.1 None
ERR4814976 Other lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
ERR4814745 Other lineage4.6.5 None
ERR4816417 Other lineage4.9 None
ERR502474 RR-TB lineage4.9 None
SRR1184308 RR-TB lineage4.9 None
SRR6982337 Sensitive lineage4.7 None
ERR978767 RR-TB lineage4.8 None
ERR4596910 Sensitive lineage4.9 None
ERR4820193 Other lineage3 None
SRR6856087 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
ERR978766 RR-TB lineage4.8 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR6981975 Sensitive lineage4.7 None
SRR6896340 Sensitive lineage4.4.1.1 None
SRR5152904 Other lineage2.2.1 None
SRR6982198 HR-TB lineage1 None
ERR10796598 Other lineage4.9 None
SRR2101773 Sensitive lineage4.3.4.2.1 None
SRR16295804 Other lineage2.2.1 None
SRR1915485 Other La1.2.BCG None
ERR245809 Sensitive lineage4.3.4.1 None
SRR6153231 Sensitive lineage4.4.1.2 None
SRR1011488 Sensitive lineage2.2.1 None
SRR6982035 Sensitive lineage4.3.2.1;lineage4.9 None
SRR16295760 Other lineage2.2.1 None
SRR7504779 Sensitive lineage4.9 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
SRR1182994 Sensitive lineage4.1.2 None
SRR16295761 Other lineage2.2.1 None
SRR6981939 Other lineage4.3.4.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR11342689 Other lineage4.1.2.1 None
SAMN02585942 Sensitive lineage4.1.2 None
ERR5162133 Sensitive La1.8.1 None
ERR5311086 Sensitive lineage4.9 None
SRR6982104 Sensitive lineage2.2.1 None
SRR6982405 Sensitive lineage4.4.1.1 None
SRR6982099 Sensitive lineage4.3.4.2.1 None
SRR6982102 Sensitive lineage2.2.1 None
SRR6982213 Sensitive lineage4.3.2.1 None
SRR15522850 HR-TB lineage1.1.2 None
ERR4816852 Other lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR6982385 Sensitive lineage4.1.2 None
SRR7645853 MDR-TB lineage2.2.1 None
SRR7504782 Sensitive lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR6981922 Sensitive lineage4.3.2.1 None
SRR16295749 Other lineage2.2.1 None
SRR6982077 Sensitive lineage4.3.2.1 None
ERR867568 Other lineage2.2.1;lineage4 None
SRR6981993 Sensitive lineage4.3.2.1 None
ERR7737918 MDR-TB lineage4.2.2.1 None
SRR6856119 Sensitive lineage2.2.1 None
ERR212033 Other lineage4.9 None
SRR16295752 Other lineage2.2.1 None
SRR6855917 Sensitive lineage4.8 None
SRR11342669 Other lineage4.8 None
ERR4815022 Other lineage3.1.2.1 None
ERR2179857 Sensitive lineage4 None
ERR3283046 Sensitive lineage4.9 None
SRR21657198 HR-TB lineage4.3.3 None
SRR2101689 Sensitive lineage4.3.4.1 None
SRR3675552 Other lineage4.9 None
ERR8025347 Sensitive lineage4.9 None
SRR8651616 MDR-TB lineage2.2.1 None
ERR4627379 Other La1.8.1 None
ERR4769482 Sensitive lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SRR18391772 Other La1.7.1 None
ERR4627392 Other La1.8.1 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR1735596 RR-TB lineage4.9 None
ERR987719 HR-TB lineage3 None
SRR2101693 Sensitive lineage4.1.2 None
SRR2101312 MDR-TB lineage2.2.1 None
SRR6982048 Sensitive lineage4.3.2.1 None
SRR1062859 Sensitive lineage2.2.1 None
SRR6982227 Sensitive lineage4.9 None
SRR7069800 Other lineage3.1.2.1 None
SRR6896339 MDR-TB lineage2.2.1 None
ERR736822 Sensitive lineage4.4.1.2 None
SRR6982229 Sensitive lineage2.2.1 None
SRR16295801 Other lineage2.2.1 None
SRR13888750 Other La2 None
SRR6982514 Sensitive lineage4.3.3 None
ERR502473 RR-TB lineage4.9 None
ERR9786258 Sensitive lineage4.3.4.1 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR16295770 Other lineage2.2.1 None
SRR6982332 Sensitive lineage4.4.1.1 None
ERR867572 Other lineage4.9 None
ERR867570 RR-TB lineage4.9 None
SRR6856032 Sensitive lineage2.2.1 None
ERR502480 Other lineage5.1.1 None
ERR760877 MDR-TB lineage4.1.2.1.1 None
SRR1181085 Sensitive lineage4.1.2 None
SRR20969475 Other lineage1.2.1.2 None
ERR3275190 Other lineage3 nl
SRR16295810 Other lineage2.2.1 None
SRR10993957 Other La1.6 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR6855963 Sensitive lineage2.2.1 None
SRR16278273 Other La1.4 None
SRR6896255 Sensitive lineage4.3.3 None
SRR13199734 Other La1.2 None
SRR7240506 Other La1.8.1 None
SRR6982414 Sensitive lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR6982328 Other lineage3.1.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
SRR2101663 Sensitive lineage1.1.3.2 None
SRR6982509 Sensitive lineage4.3.2.1 None
SRR7443747 Sensitive lineage4.9 None
SRR1915484 Other La1.2.BCG None
ERR867540 MDR-TB lineage2.2.1 None
ERR4819462 Sensitive lineage4.9 None
SRR1173170 Other lineage4.9 None
SRR7240350 Other La1.8.1 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR6982056 Other lineage4.3.4.2.1 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
SRR1181242 Sensitive lineage4.1.2 None
SRR2101709 Sensitive lineage4.1.1.3 None
SRR7444102 Sensitive lineage4.9 None
SRR18003024 RR-TB lineage2.2.1 None
SAMN02350446 Sensitive lineage2.2.1 None
SRR11342658 RR-TB lineage4.1.2 None
ERR3275615 Sensitive lineage4.4.1.1 nl
SRR2101595 RR-TB lineage4.3.4.2.1 None
ERR752012 HR-TB lineage1.1.1.1 None
SRR6982058 HR-TB lineage2.2.1 None
ERR3324325 MDR-TB lineage4.6.2.2 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR11342676 HR-TB lineage4.6.2.2 None
SRR6855851 Other lineage4.3.4.2.1 None
ERR502470 RR-TB lineage4.9 None
SRR7240537 Other La1.8.1 None
SRR1173310 Other lineage3.1.1 None
DRR184913 Sensitive lineage2.2.1 None
SRR12199468 Sensitive lineage4.9 None
SRR7504773 Sensitive lineage4.9 None
SRR16295830 Other lineage2.2.1 None
SRR6982014 Sensitive lineage4.1.1 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
ERR473303 Sensitive lineage4.9 None
SRR10993953 Other La1.6 None
SRR16295742 Other lineage2.2.1 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
SRR6044925 Sensitive lineage4.9 None
SRR9970983 MDR-TB lineage4.3.3 None
SRR6982050 Other lineage4.3.4.1 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
SRR16295809 Other lineage2.2.1 None
SRR16295741 Other lineage2.2.1 None
ERR1082121 Sensitive lineage4.9;lineage5.1.1 None
SRR10993951 RR-TB La1.6 None
SRR6981978 Sensitive lineage4.3.4.2.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR6982105 Sensitive lineage2.2.1.1 None
SRR11871419 Pre-XDR-TB lineage2.2.1 None
SRR6982057 HR-TB lineage4.3.3 None
ERR736805 Sensitive lineage2.2.1 None
ERR502481 RR-TB lineage4.9 None
SRR16295813 Other lineage2.2.1 None
SRR2101827 Other lineage4.3.4.2.1 None
SRR6982239 Sensitive lineage4.1.1.3 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4769424 Sensitive lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
SRR6045205 Sensitive lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
SRR6982558 Sensitive lineage4.3.4.2.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR6982398 Sensitive lineage2.2.1;lineage4.9 None
ERR4188255 Sensitive lineage4.9 None
SRR18911231 Sensitive lineage4.1.1.3 None
ERR190388 Sensitive lineage4.9 None
ERR3283044 Other lineage4 None
SRR16295746 Other lineage2.2.1 None
ERR176475 Sensitive lineage4.3.4.2.1 None
SRR16295808 Other lineage2.2.1 None
ERR2446509 Other lineage3 nl
ERR3275709 HR-TB lineage3 nl
SRR6855718 Other lineage4.8 None
SRR11342686 MDR-TB lineage4.8 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR4769503 Other La1.2 None
SRR6982022 Sensitive lineage4.4.1.1 None
ERR867526 MDR-TB lineage2.2.1 None
ERR4769507 Sensitive lineage4.9 None
ERR4816548 HR-TB lineage4.5 None
SRR21714045 Other lineage2.2.1 None
ERR5311088 Sensitive La1.8.1 None
SRR7069835 Other lineage2.2.1 None
ERR323068 Sensitive lineage4.9 None
SRR21675637 Sensitive lineage4.3.3 None
SRR7443751 Sensitive lineage4.9 None
SRR16295777 Other lineage2.2.1 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR16295751 Other lineage2.2.1 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR2101802 Sensitive lineage4.4.1.1 None
SRR11342693 MDR-TB lineage4.8.1 None
ERR4188187 Sensitive La1.8.1 None
SRR2101803 Sensitive lineage4.3.3 None
SRR1173740 Other lineage3;lineage4 None
SRR11342646 HR-TB lineage3 None
SRR1140716 Other lineage3 None
SRR6982146 Sensitive lineage4.1.1.3 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR7443726 Sensitive lineage4.9 None
SRR6855967 Sensitive lineage4.1.2 None
SRR6982175 Sensitive lineage1.1.3.2 None
SRR16295812 Other lineage2.2.1 None
ERR4769506 Sensitive lineage4.9 None
SRR11342698 RR-TB lineage4.4.1.1 None
ERR2307789 MDR-TB lineage2.2.1 None
SRR6982037 Sensitive lineage4.1.1.1 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR16295782 Other lineage2.2.1 None
SRR16295816 Other lineage2.2.1 None
SRR11972274 RR-TB lineage1.2.1.2.1 None
SRR2101637 RR-TB lineage4.4.1.1 None
SRR7504775 Sensitive lineage4.9 None