EBG00000313325 - n.249T>A
Drug resistance types
99 Sensitive
6 RR-TB
10 HR-TB
13 MDR-TB
13 Pre-XDR-TB
7 XDR-TB
68 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 81 |
| lineage4.3;lineage4.9 | 1 |
| lineage4.1.2 | 6 |
| lineage3.1.1 | 6 |
| lineage2.2.1 | 16 |
| lineage4.5 | 1 |
| lineage4.3.3 | 6 |
| lineage4.4.1.1 | 5 |
| lineage1.1.3.2 | 2 |
| lineage4.3.4.2.1 | 6 |
| lineage4.6.1.1 | 1 |
| lineage4.2.2.2 | 3 |
| lineage4.1.2.1.1 | 1 |
| lineage4.1.1.3 | 4 |
| lineage4.3.4.1 | 2 |
| lineage4.8 | 6 |
| lineage4.6.1.2 | 1 |
| lineage4.1.1.1 | 1 |
| lineage5.1.4 | 1 |
| lineage2.2.2 | 15 |
| lineage1.1.2 | 2 |
| 1 | |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.2 | 2 |
| lineage1.2.2.2 | 4 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.3.2.1 | 4 |
| lineage4.6.2.2 | 2 |
| lineage2.2.1.1 | 3 |
| lineage6.2.3 | 1 |
| La1.7.1 | 1 |
| lineage4.3.2 | 1 |
| lineage6.1.1 | 1 |
| lineage4.6.5 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4 | 1 |
| lineage4.1.1.1;lineage4.9 | 1 |
| lineage5.1.1 | 3 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.8.1 | 2 |
| lineage1.1.1 | 2 |
| lineage4.1.3 | 1 |
| lineage3 | 1 |
| lineage1.2.2.1 | 2 |
| lineage4.2.1.1 | 1 |
| lineage2.2.2;lineage4 | 2 |
| La1.8.1;lineage4.9 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 216 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13861459 | HR-TB | lineage4.9 | None | SRR1182927 | Other | lineage4.9 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | ERR163988 | Sensitive | lineage4.1.2 | None | SRR12882669 | Sensitive | lineage3.1.1 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | SRR19612366 | Other | lineage4.5 | None | ERR9992658 | HR-TB | lineage2.2.1 | None | ERR181940 | Sensitive | lineage3.1.1 | None | SRR14801688 | Sensitive | lineage4.3.3 | None | ERR176739 | Sensitive | lineage4.4.1.1 | None | ERR181864 | Sensitive | lineage3.1.1 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | SRR13861142 | Other | lineage4.9 | None | ERR181750 | Sensitive | lineage1.1.3.2 | None | SRR1182954 | Other | lineage4.9 | None | SRR7645856 | Sensitive | lineage4.4.1.1 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | ERR502482 | Sensitive | lineage4.9 | None | ERR4769393 | Sensitive | lineage4.9 | None | SRR1183067 | Other | lineage4.9 | None | ERR323068 | Sensitive | lineage4.9 | None | SRR1183323 | Other | lineage4.9 | None | SAMN02567676 | MDR-TB | lineage4.6.1.1 | None | SRR1049569 | Sensitive | lineage4.2.2.2 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | SRR10869203 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR1181193 | Other | lineage4.9 | None | ERR161170 | Sensitive | lineage4.3.4.1 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR108424 | Sensitive | lineage4.8 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR987757 | MDR-TB | lineage4.6.1.2 | None | ERR10796553 | Other | lineage4.9 | None | SRR1181319 | Sensitive | lineage2.2.1 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | ERR702423 | Sensitive | lineage5.1.4 | None | ERR1873549 | Pre-XDR-TB | lineage2.2.2 | None | ERR1873437 | HR-TB | lineage2.2.2 | None | SRR5341390 | HR-TB | lineage1.1.2 | None | SRR1180831 | Other | lineage4.9 | None | ERR144568 | Sensitive | None | ERR9993167 | XDR-TB | lineage2.2.2 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | SRR1181136 | Sensitive | lineage2.2.1 | None | SRR1183192 | Other | lineage4.9 | None | ERR4816458 | Other | lineage1.2.2.2 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | SRR12882699 | Sensitive | lineage1.1.2 | None | SRR1183475 | Sensitive | lineage4.9 | None | SRR6981912 | Sensitive | lineage4.3.2.1 | None | SRR6982138 | Sensitive | lineage4.1.1.3 | None | ERR502472 | Sensitive | lineage4.6.2.2 | None | SRR13861141 | Other | lineage4.9 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | ERR4808980 | Pre-XDR-TB | lineage2.2.2 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR10796630 | Other | lineage6.2.3 | None | SRR1792247 | Other | La1.7.1 | None | SRR1183358 | Other | lineage4.9 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | SRR4037619 | Sensitive | lineage4.3.2.1 | None | SRR6982115 | Sensitive | lineage4.3.2 | None | SRR1011489 | Sensitive | lineage2.2.1.1 | None | SRR1180687 | Other | lineage4.9 | None | SRR1183321 | Other | lineage4.9 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | ERR1023250 | Sensitive | lineage6.1.1 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR13861324 | Other | lineage4.9 | None | SRR1182958 | Other | lineage4.9 | None | ERR9992790 | XDR-TB | lineage2.2.2 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR305201 | Sensitive | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR12882768 | RR-TB | lineage3.1.1 | None | ERR1873482 | Pre-XDR-TB | lineage2.2.1 | None | ERR161125 | Sensitive | lineage4 | None | SRR7070369 | Other | lineage1.2.2.2 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | SRR1180774 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR4769525 | Sensitive | lineage4.9 | None | SRR6982297 | Sensitive | lineage4.1.1.1;lineage4.9 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR1180111 | Other | lineage4.9 | None | ERR502494 | Other | lineage5.1.1 | None | SRR1182880 | Other | lineage4.9 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR181749 | Sensitive | lineage4.3.4.2.1 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | ERR9993028 | XDR-TB | lineage2.2.2 | None | SRR6982410 | Sensitive | lineage4.8.1 | None | ERR502498 | Sensitive | lineage4.9 | None | SRR1181377 | Other | lineage4.9 | None | SRR1183403 | Other | lineage4.9 | None | ERR502484 | Sensitive | lineage4.9 | None | SRR1019127 | Other | lineage4.9 | None | ERR779680 | Sensitive | lineage4.3.4.2.1 | None | SRR1182976 | Other | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | SRR1180047 | Other | lineage4.9 | None | ERR4187921 | Sensitive | lineage4.9 | None | SRR1180087 | Other | lineage4.9 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR1144989 | Sensitive | lineage4.8 | None | ERR751729 | Other | lineage1.1.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR190332 | Sensitive | lineage4.3.4.1 | None | SRR1183152 | Other | lineage4.9 | None | SRR1180125 | Other | lineage4.9 | None | SRR1011488 | Sensitive | lineage2.2.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR502480 | Other | lineage5.1.1 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | SRR6789621 | Other | lineage4.9 | None | SRR1049031 | Sensitive | lineage4.9 | None | ERR10796625 | Other | lineage4.4.1.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR1049568 | Sensitive | lineage4.2.2.2 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR1183438 | Other | lineage4.9 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9993145 | Pre-XDR-TB | lineage2.2.2 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR3014590 | Pre-XDR-TB | lineage4.8 | None | SRR1180094 | Other | lineage4.9 | None | SRR3105736 | Sensitive | lineage1.2.2.2 | None | ERR502497 | Sensitive | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR1183684 | Other | lineage4.9 | None | SRR1049030 | Sensitive | lineage4.9 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | SRR1181147 | Other | lineage4.9 | None | SRR7131123 | Other | lineage4.8 | None | ERR502490 | Sensitive | lineage4.9 | None | SRR1183531 | Other | lineage4.9 | None | ERR751317 | Sensitive | lineage4.9 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | ERR176450 | Sensitive | lineage4.1.1.3 | None | ERR9993215 | XDR-TB | lineage2.2.2 | None | ERR212042 | HR-TB | lineage3.1.1 | None | ERR718268 | Sensitive | lineage1.1.1 | None | SRR1180113 | Other | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR1062863 | Sensitive | lineage1.2.2.1 | None | SAMN02380985 | Sensitive | lineage4.2.2.2 | None | SRR13861144 | Other | lineage4.9 | None | ERR9992725 | Pre-XDR-TB | lineage2.2.2 | None | SRR1182900 | Sensitive | lineage4.9 | None | ERR2693238 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | SRR7646056 | Other | lineage4.2.1.1 | None | ERR1063847 | Sensitive | lineage3.1.1 | None | SRR1183018 | Other | lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR1181299 | Other | lineage4.9 | None | SRR1013637 | Sensitive | lineage2.2.2;lineage4 | None | ERR7801314 | Sensitive | lineage4.3.4.2 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1013636 | Sensitive | lineage2.2.2;lineage4 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1180617 | Other | lineage4.9 | None | ERR5758436 | Other | lineage2.2.2 | None | SRR1183339 | Other | lineage4.9 | None | SRR1183091 | Other | lineage4.9 | None | SRR16157045 | Sensitive | lineage4.9 | None | SRR1183686 | Sensitive | lineage4.9 | None | ERR4187641 | Sensitive | La1.8.1;lineage4.9 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR1203071 | Sensitive | lineage4.8 | None | SRR1183472 | Other | lineage4.9 | None | ERR502517 | Other | lineage5.1.1 | None | ERR9992612 | XDR-TB | lineage4.3.3 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | SRR1183520 | Other | lineage4.9 | None | ERR9992810 | XDR-TB | lineage2.2.2 | None | ERR9993035 | MDR-TB | lineage4.4.1.1 | None | ERR161201 | Sensitive | lineage1.1.3.2 | None | SRR1180100 | Other | lineage4.9 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1175173 | HR-TB | lineage3.1.2.1 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR1183121 | Other | lineage4.9 | None | ERR9992817 | XDR-TB | lineage2.2.2 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR1183511 | Other | lineage4.9 | None | SRR6982102 | Sensitive | lineage2.2.1 | None | ERR502489 | Sensitive | lineage4.9 | None | SRR1165236 | Pre-XDR-TB | lineage2.2.2 | None | SRR1183402 | Other | lineage4.9 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR1183214 | Other | lineage4.9 | None | SRR1183375 | Other | lineage4.9 | None | SRR1181264 | Sensitive | lineage4.9 | None | SRR1183190 | Other | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR161045 | Sensitive | lineage4.3.4.2.1 | None | ERR190388 | Sensitive | lineage4.9 | None | SRR6152979 | Other | lineage4.7 | None | SAMN02599156 | HR-TB | lineage3.1.2.1 | None | SAMN02350450 | Sensitive | lineage1.2.2.1 | None |
|---|
