EBG00000313325 - n.673G>C
Drug resistance types
178 Sensitive
8 RR-TB
17 HR-TB
37 MDR-TB
23 Pre-XDR-TB
0 XDR-TB
78 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.3 | 4 |
| lineage4.9 | 49 |
| La1 | 1 |
| La1.2 | 2 |
| lineage2.2.1 | 49 |
| lineage4.2.1 | 2 |
| lineage2.2 | 4 |
| lineage2.2.2 | 6 |
| lineage4.1.2.1 | 8 |
| lineage1.1.1 | 2 |
| lineage5.1.1 | 4 |
| lineage4.8 | 15 |
| lineage5.1.4 | 2 |
| lineage4.4.1.2 | 2 |
| lineage5.1.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.3.3 | 13 |
| lineage3 | 8 |
| La1.8.1 | 34 |
| lineage4.3.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.1.1.3 | 8 |
| lineage4.3.2.1 | 12 |
| lineage4.6.1;lineage3.1 | 1 |
| lineage4.6.1 | 3 |
| lineage4.1.2 | 9 |
| lineage3.1.2.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1.2 | 2 |
| lineage4.9;lineage4.4.2 | 1 |
| lineage2 | 1 |
| lineage1.1 | 1 |
| 9 | |
| lineage3.1.1 | 7 |
| La1.7.1 | 2 |
| La1.4 | 1 |
| lineage4.1.1.2 | 2 |
| lineage4.1.1 | 7 |
| lineage1.1.3.2 | 4 |
| lineage4.1.2;lineage3.1 | 2 |
| lineage4.3.4.1 | 2 |
| lineage4.4.1.1 | 7 |
| lineage4.3.4.2.1 | 12 |
| lineage4.5 | 2 |
| lineage4.9.1 | 3 |
| lineage1.2.2.2 | 3 |
| lineage4.3.4 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4 | 5 |
| lineage4.2 | 1 |
| lineage2.2.1;lineage1.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.4 | 1 |
| lineage1.2.2.1 | 1 |
| lineage4.7 | 1 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage4.3 | 1 |
| lineage4.9;La1.8.1 | 2 |
| lineage4.3.4.2 | 2 |
| lineage1.1.1.1 | 1 |
| lineage3.1.2.2 | 1 |
| La1.8 | 1 |
| lineage4.9;La1.8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 341 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769462 | Other | La1.3 | None | ERR4769467 | Sensitive | lineage4.9 | None | ERR4769470 | Sensitive | lineage4.9 | None | ERR4769471 | Other | La1.3 | None | ERR4769482 | Sensitive | La1 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4769537 | Sensitive | lineage4.9 | None | ERR4769549 | Sensitive | lineage4.9 | None | ERR4772210 | Other | La1.2 | None | ERR5863716 | MDR-TB | lineage2.2.1 | None | ERR4772230 | Other | La1.2 | None | ERR5864322 | MDR-TB | lineage4.2.1 | None | ERR5865337 | MDR-TB | lineage2.2 | None | ERR5864323 | MDR-TB | lineage4.2.1 | None | ERR5865119 | MDR-TB | lineage2.2.1 | None | ERR5865338 | MDR-TB | lineage2.2 | None | ERR5865118 | MDR-TB | lineage2.2.1 | None | ERR5865339 | MDR-TB | lineage2.2.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR6865901 | Sensitive | lineage4.1.2.1 | None | ERR6362473 | MDR-TB | lineage2.2.2 | None | ERR718268 | Sensitive | lineage1.1.1 | None | ERR702399 | Sensitive | lineage5.1.1 | gh | ERR6866186 | Sensitive | lineage4.8 | None | ERR6866821 | Sensitive | lineage4.1.2.1 | None | ERR702423 | Sensitive | lineage5.1.4 | None | ERR736808 | Sensitive | lineage2.2.1 | None | ERR751729 | Other | lineage1.1.1 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR751339 | Sensitive | lineage5.1.2 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | ERR987757 | MDR-TB | lineage4.6.1.2 | None | ERR8025347 | Sensitive | lineage4.9 | None | ERR9285816 | Sensitive | lineage4.3.3 | None | ERR987719 | HR-TB | lineage3 | None | SRR1011480 | MDR-TB | lineage4.8 | None | SRR10306025 | Pre-XDR-TB | lineage2.2.1 | None | SRR1011488 | Other | lineage2.2.1 | None | SRR10482948 | Other | La1.8.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1062851 | MDR-TB | lineage4.8 | None | SRR10482944 | Other | La1.8.1 | None | SRR1062820 | Pre-XDR-TB | lineage2.2.1 | None | SRR10808496 | Sensitive | lineage4.3.2 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR10869292 | Pre-XDR-TB | lineage2.2.1 | None | SRR10808722 | Sensitive | lineage4.8 | None | SRR10869086 | Pre-XDR-TB | lineage2.2.2 | None | SRR10869268 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1169301 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10869318 | Sensitive | lineage2.2.1 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | SRR1169167 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1172306 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR1173565 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1173361 | MDR-TB | lineage4.6.1 | None | SRR1173717 | MDR-TB | lineage4.6.1 | None | SRR1173705 | Other | lineage4.9 | None | SRR1173781 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1175173 | HR-TB | lineage3.1.2.1 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11972378 | MDR-TB | lineage1.1.2 | None | SRR11972407 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972390 | MDR-TB | lineage2.2.1 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR124452 | HR-TB | lineage2 | None | SRR12199472 | Sensitive | lineage1.1 | None | SRR124453 | HR-TB | None | SRR124451 | HR-TB | None | SRR12882768 | RR-TB | lineage3.1.1 | None | SRR12882669 | RR-TB | lineage3.1.1 | None | SRR13199739 | Other | La1.7.1 | None | SRR15368914 | MDR-TB | lineage2.2.1 | None | SRR14782537 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR16157044 | RR-TB | lineage2.2.1 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR16278273 | Other | La1.4 | None | SRR17832798 | Other | lineage3 | None | SRR17856664 | Sensitive | lineage3 | None | SRR18149430 | Sensitive | lineage4.1.1.3 | None | SRR1792247 | Other | La1.7.1 | None | SRR18149455 | Sensitive | lineage4.1.2.1 | None | SRR18149443 | Sensitive | lineage3 | None | SRR19576436 | Sensitive | None | SRR2101666 | Sensitive | lineage4.8 | None | SRR2101498 | Sensitive | lineage4.1.1.2 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR2101663 | Other | lineage1.1.3.2 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | SRR2101625 | Other | lineage4.1.2;lineage3.1 | None | SRR2101711 | Sensitive | lineage2.2.1 | None | SRR2101689 | Other | lineage4.3.4.1 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR2101709 | Sensitive | lineage4.1.1.3 | None | SRR21239778 | Sensitive | lineage4.3.3 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR2101773 | Sensitive | lineage4.3.4.2.1 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR2101816 | Other | lineage4.8 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | SRR21714045 | HR-TB | lineage2.2.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR21764250 | Other | lineage4.9 | None | SRR21737226 | Sensitive | lineage4.5 | None | ERR3276300 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175227 | Pre-XDR-TB | lineage3 | None | ERR176756 | Sensitive | lineage4.9.1 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR176771 | Sensitive | None | ERR176780 | Sensitive | lineage4.9 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR181940 | Sensitive | lineage3.1.1 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR161150 | Sensitive | lineage4.3.4.2.1 | None | SRR3105736 | Other | lineage1.2.2.2 | None | ERR161125 | Sensitive | lineage4.3.4 | None | SAMN02567676 | MDR-TB | lineage4.6.1 | None | ERR163988 | Sensitive | lineage4.1.2 | None | ERR163952 | Sensitive | lineage1.1.3.2 | None | ERR181749 | Sensitive | lineage4.3.4.2.1 | None | ERR176450 | Sensitive | lineage4.1.1 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR1873476 | Pre-XDR-TB | lineage2.2.2 | None | ERR176739 | Sensitive | lineage4.4.1.1 | None | ERR2179857 | RR-TB | lineage4 | None | ERR190388 | Sensitive | lineage4.9 | None | ERR212042 | HR-TB | lineage3.1.1 | None | ERR4816101 | Other | lineage4.1.2.1 | None | ERR2179737 | HR-TB | lineage4.2 | None | ERR212082 | Sensitive | lineage4.9.1 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | ERR216949 | Sensitive | lineage4 | None | ERR216986 | Sensitive | lineage4.3.4.2.1 | None | SRR4033190 | HR-TB | lineage4.9 | None | SRR4033203 | Sensitive | lineage4.9 | None | ERR2179850 | Sensitive | lineage4 | None | SRR4034393 | MDR-TB | lineage4.1.2.1 | None | ERR221608 | Sensitive | lineage1.2.2.2 | None | SAMN02350437 | MDR-TB | lineage4.8 | None | SRR5153236 | MDR-TB | lineage2.2.1 | None | ERR245810 | Sensitive | lineage4.9.1 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | ERR2515484 | Other | lineage4.8 | None | ERR2515721 | Sensitive | lineage4.3.2.1 | None | SRR5341430 | Other | lineage3 | None | SRR5266535 | Pre-XDR-TB | lineage2.2.1 | ru | ERR2515854 | Sensitive | lineage2.2.1 | None | SRR6044925 | Sensitive | lineage4.9 | None | ERR2515148 | Sensitive | lineage4.3.3 | None | ERR2653138 | MDR-TB | lineage4.1.2.1 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR2843513 | Other | lineage2.2.1;lineage1.1.1 | None | ERR2843536 | Other | lineage2.2.1 | None | SRR6046752 | Sensitive | lineage4.2.2.2 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR6484909 | Sensitive | lineage2.2.1 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | ERR502472 | Other | lineage4.6.2.2 | None | SRR6982078 | Sensitive | None | ERR502482 | Sensitive | lineage4.9 | None | ERR502480 | Other | lineage5.1.1 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR502484 | Sensitive | lineage4.9 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR502497 | Sensitive | lineage4.9 | None | ERR502498 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | ERR502494 | Other | lineage5.1.1 | None | SRR6856087 | Sensitive | lineage4 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6896340 | HR-TB | lineage4.4.1.1 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6982139 | Sensitive | lineage4.9 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR6982419 | Other | lineage4.8 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR6982148 | Sensitive | lineage2.2.1 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6982180 | Sensitive | lineage4.1.1.2 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6982430 | Other | lineage4.3.4.2.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6982190 | Sensitive | lineage4.3.3 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982205 | Sensitive | lineage1.2.2.1 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982427 | Sensitive | lineage4.1.1 | None | SRR6982196 | Sensitive | None | SRR6982313 | Sensitive | lineage4.3.4.2.1 | None | SRR6982328 | HR-TB | lineage3.1.1 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6855718 | Sensitive | lineage4.8 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6982362 | Other | lineage4.3.2.1 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6981981 | Other | lineage4.3.3 | None | SRR6855768 | Other | lineage4.3.2.1 | None | SRR6981948 | Sensitive | lineage4.3.2.1 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR6981978 | Sensitive | lineage4.3.4.2.1 | None | SRR6824550 | Sensitive | lineage4.5 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6855851 | Sensitive | lineage4.3.4.2.1 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6982389 | Other | lineage4.1.2;lineage3.1 | None | SRR6982014 | Other | lineage4.1.1 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR6982026 | Sensitive | lineage4.3.3 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6855917 | Other | lineage4.8 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6824624 | Sensitive | lineage2.2.1 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6855967 | Sensitive | lineage4.1.2 | None | SRR6982053 | Sensitive | lineage4.9;lineage4.3.4.1 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6982057 | Pre-XDR-TB | lineage4.3 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6982405 | Sensitive | None | ERR502513 | Sensitive | lineage5.1.4 | gh | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | ERR323036 | HR-TB | None | SRR6856032 | Sensitive | lineage2.2.1 | None | ERR5162133 | Other | La1.8.1 | None | ERR5311093 | Other | La1.8.1 | None | ERR5087606 | Other | La1.8.1 | None | ERR5162118 | Other | La1.8.1 | None | ERR5162126 | Sensitive | lineage4.9 | None | ERR5311076 | Other | La1.8.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | ERR5311080 | Other | La1.8.1 | None | ERR5087707 | Other | La1.8.1 | None | ERR5311088 | Other | La1.8.1 | None | ERR5311085 | Other | La1.8.1 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | SRR6982558 | Other | lineage4.3.4.2 | None | SRR6982509 | Sensitive | lineage4.3.2.1 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | SRR8346061 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034687 | Sensitive | lineage3 | None | SRR7585400 | MDR-TB | lineage3 | None | ERR323061 | Sensitive | lineage4.9 | None | DRR184621 | Sensitive | lineage1.1.1.1 | None | SRR7585435 | Other | lineage4.9 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR1063873 | Sensitive | lineage4.3.4.2.1 | None | ERR1063847 | Sensitive | lineage3.1.1 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | ERR1063890 | Sensitive | lineage3.1.1 | None | ERR1082121 | Sensitive | lineage4.9 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | ERR1203071 | Sensitive | lineage4.8 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | ERR1203078 | Sensitive | lineage4.6.2.2 | None | ERR3283034 | Sensitive | lineage4.9 | None | ERR3439443 | Other | La1.8.1 | None | ERR4187636 | Other | La1.8.1 | None | ERR3797007 | Other | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR3797078 | Sensitive | lineage4.9 | None | ERR4024812 | Sensitive | lineage4.1.2.1 | None | ERR4187645 | Other | La1.8.1 | None | ERR4187800 | Other | La1.8.1 | None | ERR4187819 | Other | La1.8 | None | ERR4188072 | Other | lineage4.9;La1.8.1 | None | ERR4187869 | Other | La1.8.1 | None | ERR4187916 | Other | La1.8.1 | None | ERR4187952 | Other | La1.8.1 | None | ERR4188010 | Other | La1.8.1 | None | ERR4187993 | Other | La1.8.1 | None | ERR4188021 | Other | La1.8.1 | None | ERR4188160 | Other | La1.8.1 | None | ERR4188187 | Other | La1.8.1 | None | ERR4188222 | MDR-TB | La1.8.1 | None | ERR4188202 | Other | La1.8.1 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4188372 | RR-TB | La1.8.1 | None | ERR4188254 | Other | La1.8.1 | None | ERR4188255 | Other | lineage4.9;La1.8 | None | ERR4188253 | Other | La1.8.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4188381 | Other | La1.8.1 | None | ERR4188375 | Sensitive | lineage4.9 | None | ERR4188395 | Other | La1.8.1 | None | ERR4627379 | Other | La1.8.1 | None | ERR4627392 | Other | La1.8.1 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR473298 | Sensitive | lineage4.6.2.2 | None | ERR4769412 | Sensitive | lineage4.9 | None | ERR473341 | Sensitive | lineage4.1.1.3 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769428 | Other | La1.3 | None |
|---|
