EBG00000313339 - n.2640C>A


Drug resistance types
155 Sensitive 10 RR-TB 25 HR-TB 50 MDR-TB 34 Pre-XDR-TB 0 XDR-TB 134 Other
lineage Counts
lineage Count
lineage4.3.3 15
lineage4.3.4.1 5
9
lineage4.1.2.1 26
La1.8.1 26
lineage4.8 11
lineage2.2.1 82
lineage4.3.4.2 9
lineage4.6.2.2 3
lineage4.9 50
lineage4.6.1.2 2
lineage2.2.2 10
lineage1.1.1.1 1
La2 1
lineage3.1.1 7
lineage4.3.4.2.1 15
lineage1.1.2 4
lineage4.4.1.1 5
lineage4.9;lineage1.1 1
lineage4.2.1 2
lineage4 9
lineage5.1.1 2
lineage6.2.2 2
lineage4.1.1 6
La1.8 1
La1.3 4
La1 1
La1.2 2
lineage3 14
lineage1.2.1.2.1 1
lineage1.1.1 2
lineage1.1.3.2 7
lineage4.1.1.3 2
lineage4.8.1 1
lineage4.4.1.1.1 1
lineage1.2.2.1 1
lineage4;lineage1.2.2.1 1
lineage3.1.3 3
lineage6.1.1 1
La1.6 2
lineage2.2.1.1 8
lineage4.3.2.1 4
lineage4.1.2 7
lineage1.1.3.1 5
lineage1.1.3 1
lineage1.2.2.2 2
lineage4.9;lineage4.4.2 1
La1.7.1 3
lineage4.4.2 3
lineage4.2.2.2 3
lineage2.2.2;lineage2.2.1 1
lineage2.2 1
lineage4.2.2 1
lineage4.5 5
lineage4.3.4 1
lineage4.6.4 1
lineage4.9;lineage3.1.1 1
lineage1.2.1.1 1
lineage3.1 1
lineage4.9.1 1
lineage6.2.3 1
lineage4.8;lineage2.2.1 1
lineage4.3.2 1
lineage4.1.1.3.1 1
lineage4.3.2.1;lineage2.2.1 1
lineage3.1.2.2 1
lineage4.4.1.2 1
lineage4.6 1
lineage4.9;lineage4.3.4.1 1
lineage4.1.1.1 1
spoligotype Counts
spoligotype Count
None 408
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2984782 Pre-XDR-TB lineage4.3.3 None
ERR2984792 Pre-XDR-TB lineage4.3.4.1 None
ERR323036 HR-TB None
SRR7131147 Other lineage4.1.2.1 None
ERR5311093 Other La1.8.1 None
ERR5087568 Other La1.8.1 None
ERR5087675 Other La1.8.1 None
SRR7131075 Other lineage4.8 None
ERR5087606 Other La1.8.1 None
ERR5311085 Other La1.8.1 None
SRR9971270 RR-TB lineage2.2.1 None
SRR7131230 HR-TB lineage4.3.4.2 None
SRR7131161 Other lineage4.8 None
SRR7131182 Other lineage4.1.2.1 None
SRR7131221 Other lineage4.6.2.2 None
SRR7131234 Other lineage4.9 None
SRR7131229 Other lineage4.1.2.1 None
ERR323048 Pre-XDR-TB lineage4.9 None
SRR8346061 Pre-XDR-TB lineage2.2.1 None
SRR7535044 Pre-XDR-TB lineage4.6.1.2 None
SRR9971353 MDR-TB lineage2.2.2 None
ERR323041 HR-TB None
ERR323068 Sensitive lineage4.9 None
ERR323061 Sensitive lineage4.9 None
DRR184913 Sensitive lineage2.2.1 None
DRR184621 Sensitive lineage1.1.1.1 None
DRR120409 HR-TB La2 None
ERR1063847 Sensitive lineage3.1.1 None
ERR1034638 Pre-XDR-TB lineage2.2.1 None
ERR1063873 Sensitive lineage4.3.4.2.1 None
ERR1063888 HR-TB lineage1.1.2 None
ERR1063879 Sensitive lineage4.9 None
ERR1063875 Sensitive lineage4.4.1.1 None
ERR1063882 Sensitive lineage4.3.4.2 None
ERR1063890 Sensitive lineage3.1.1 None
ERR10796568 Other lineage4.9 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10762317 Pre-XDR-TB lineage4.2.1 None
ERR10796589 Other lineage4.9 None
ERR10796571 Other lineage4.9 None
ERR10796577 RR-TB lineage4.9 None
ERR10796599 Other lineage4 None
ERR10796592 Other lineage4 None
ERR10796598 RR-TB lineage4.9 None
ERR1082121 Sensitive lineage4.9 None
ERR10796629 Other lineage4 None
ERR3439268 Sensitive lineage4.9 None
ERR1203071 Sensitive lineage4.8 None
ERR126603 Sensitive lineage4.3.3 None
ERR126614 Sensitive lineage4.3.4.2.1 None
ERR133816 MDR-TB lineage2.2.1 None
ERR3439235 Sensitive lineage4.9 None
ERR1082134 Sensitive lineage5.1.1 None
ERR1203078 Sensitive lineage4.6.2.2 None
ERR3273119 MDR-TB lineage2.2.1 None
ERR3439229 Other La1.8.1 None
ERR3439266 Other La1.8.1 None
ERR3439285 Sensitive lineage4.9 None
ERR3439277 Sensitive lineage4.9 None
ERR4187800 Other La1.8.1 None
ERR3804140 Sensitive lineage6.2.2 None
ERR4024588 Other lineage4.1.1 None
ERR4024812 Sensitive lineage4.1.2.1 None
ERR4178216 Sensitive lineage4.1.2.1 None
ERR4178241 Sensitive lineage4.3.3 None
ERR3439443 Other La1.8.1 None
ERR3804154 Sensitive lineage4.1.2.1 None
ERR4178135 Sensitive lineage4.3.4.1 None
ERR4187819 Other La1.8 None
ERR4188213 HR-TB La1.8.1 None
ERR4187952 Other La1.8.1 None
ERR4188021 Other La1.8.1 None
ERR4188160 Other La1.8.1 None
ERR4188187 Other La1.8.1 None
ERR4188222 MDR-TB La1.8.1 None
ERR4188381 Other La1.8.1 None
ERR4188254 Other La1.8.1 None
ERR4188375 Sensitive lineage4.9 None
ERR4627369 Other La1.8.1 None
ERR4188395 Other La1.8.1 None
ERR473278 Sensitive lineage4.9 None
ERR473303 Sensitive lineage4.9 None
ERR4769462 Other La1.3 None
ERR4769412 Sensitive lineage4.9 None
ERR4769428 Other La1.3 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769471 Other La1.3 None
ERR4769470 Sensitive lineage4.9 None
ERR4769467 Sensitive lineage4.9 None
ERR4769482 Sensitive La1 None
ERR4796577 MDR-TB None
ERR4769537 Sensitive lineage4.9 None
ERR4769549 Sensitive lineage4.9 None
ERR4772210 Other La1.2 None
ERR6362473 MDR-TB lineage2.2.2 None
ERR6052085 Pre-XDR-TB lineage2.2.2 None
ERR6358728 MDR-TB lineage4.6.1.2 None
ERR6359064 Sensitive lineage4.9 None
ERR5979407 Other lineage3 None
ERR6052110 Pre-XDR-TB lineage2.2.2 None
ERR6336794 Sensitive lineage1.2.1.2.1 None
ERR6865839 Sensitive lineage4.3.4.1 None
ERR6865390 Sensitive lineage4.3.3 None
ERR6865691 Other lineage4.1.1 None
ERR6865773 Sensitive lineage4.1.2.1 None
ERR736808 Sensitive lineage2.2.1 None
ERR6865901 Sensitive lineage4.1.2.1 None
ERR6866157 Sensitive lineage2.2.1 None
ERR6866223 Other lineage4.1.1 None
ERR718268 Sensitive lineage1.1.1 None
ERR736805 Sensitive lineage2.2.1 None
ERR736867 HR-TB None
ERR736818 Sensitive lineage4.3.3 None
ERR736879 Sensitive lineage1.1.3.2 None
ERR1873446 Pre-XDR-TB lineage4.1.1.3 None
ERR1873561 Pre-XDR-TB lineage2.2.2 None
ERR1873463 MDR-TB lineage2.2.2 None
ERR7821222 Sensitive lineage4.8.1 None
ERR773795 Sensitive lineage4.3.4.2 None
ERR7821131 MDR-TB lineage4.4.1.1.1 None
ERR176565 Sensitive lineage4.3.4.2.1 None
ERR8665507 Pre-XDR-TB lineage2.2.1 None
ERR161201 Sensitive lineage1.1.3.2 None
ERR176489 Sensitive lineage4.3.4.2.1 None
ERR176619 Sensitive lineage4.9 None
ERR181959 Sensitive lineage4.3.4.2.1 None
ERR9117681 Other lineage4.3.3 None
ERR212084 Sensitive lineage1.2.2.1 None
ERR212112 Sensitive lineage4;lineage1.2.2.1 None
ERR212003 Sensitive lineage4.3.4.2.1 None
ERR9786258 Sensitive lineage4.3.4.1 None
ERR9117781 Other lineage3.1.3 None
ERR9285816 Sensitive lineage4.3.3 None
ERR9786447 Sensitive lineage4.1.2.1 None
SRR10726045 MDR-TB lineage4.3.3 None
ERR9786528 Sensitive lineage4.6.2.2 None
ERR9786558 Sensitive lineage4.3.4.2 None
ERR9787142 Sensitive lineage6.2.2 None
SRR1049674 HR-TB lineage2.2.1 None
ERR9786498 Sensitive lineage4.1.2.1 None
ERR9786538 Sensitive lineage4.3.4.2 None
ERR9786663 Sensitive lineage4.3.4.2 None
ERR9786954 HR-TB lineage4.1.2.1 None
ERR9787323 Sensitive lineage6.1.1 None
ERR987719 HR-TB lineage3 None
SRR10315465 MDR-TB lineage4.4.1.1 None
SRR10315472 MDR-TB lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR10482948 Other La1.8.1 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR10808722 Sensitive lineage4.8 None
SRR10851629 Sensitive lineage4.3.3 None
SRR10993944 Other La1.6 None
SRR10869143 Pre-XDR-TB lineage2.2.1 None
SRR10869160 Sensitive lineage2.2.1.1 None
SRR10869292 Pre-XDR-TB lineage2.2.1 None
SRR10869074 Sensitive lineage2.2.1.1 None
SRR10869302 MDR-TB lineage4.3.2.1 None
SRR10869318 Sensitive lineage2.2.1 None
SRR10993957 Other La1.6 None
SRR1169145 MDR-TB lineage4.1.1 None
SRR11294512 Other La1.8.1 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1180237 Sensitive lineage4.1.2 None
SRR1169150 MDR-TB lineage4.4.1.1 None
SRR1172090 MDR-TB lineage4.4.1.1 None
SRR1172177 MDR-TB lineage4.1.1 None
SRR1173100 Other lineage4.9 None
SRR1175334 Other lineage4.9 None
SRR1181242 Sensitive lineage4.1.2 None
SRR1181085 Sensitive lineage4.1.2 None
SRR11871413 Pre-XDR-TB lineage2.2.1 None
SRR1182994 Sensitive lineage4.1.2 None
SRR11871419 Pre-XDR-TB lineage2.2.1 None
SRR11972188 MDR-TB lineage2.2.1 None
SRR11972175 MDR-TB lineage2.2.1 None
SRR11972264 Pre-XDR-TB lineage2.2.1.1 None
SRR11972242 Other lineage2.2.1 None
SRR11972378 MDR-TB lineage1.1.2 None
SRR11972283 MDR-TB lineage2.2.1 None
SRR12199461 Sensitive lineage1.1.3.1 None
SRR11972434 Sensitive lineage2.2.1 None
SRR11972438 HR-TB lineage1.1.1 None
SRR12199410 Sensitive lineage1.1.3 None
SRR11972390 MDR-TB lineage2.2.1 None
SRR12199409 Other lineage1.2.2.2 None
SRR12199465 Sensitive lineage2.2.1.1 None
SRR13199733 Other La1.2 None
SRR13180301 HR-TB lineage3 None
SRR12199468 Sensitive lineage4.9;lineage4.4.2 None
SRR12882020 Other lineage3.1.1 None
SRR12882374 Sensitive lineage3.1.1 None
SRR12882699 Sensitive lineage1.1.2 None
SRR13423553 Pre-XDR-TB lineage2.2.1 None
SRR13199738 Other La1.7.1 None
SRR14296211 Other La1.8.1 None
SRR13423629 MDR-TB lineage2.2.1 None
SRR14782537 Pre-XDR-TB lineage2.2.1 None
SRR14782096 MDR-TB lineage2.2.1 None
SRR14801294 MDR-TB lineage2.2.1 None
SRR1792247 Other La1.7.1 None
SRR14802194 Sensitive lineage4.3.3 None
SRR1573728 Sensitive lineage4.4.2 None
SRR16058249 Sensitive lineage4.2.2.2 None
SRR14802191 Sensitive lineage2.2.1 None
SRR17406750 Other lineage1.1.2 None
SRR17832798 Other lineage3 None
SRR1792232 Other La1.7.1 None
SRR1792265 Other La1.8.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR1792304 Other La1.8.1 None
SRR1792392 Other La1.8.1 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002876 MDR-TB lineage2.2.2;lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002909 MDR-TB lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18002937 Other lineage2.2.1 None
SRR18002906 Pre-XDR-TB lineage2.2.1 None
SRR18002926 Other lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002948 Other lineage2.2 None
SRR18002945 RR-TB lineage2.2.1 None
SRR18002980 Other lineage2.2.1 None
SRR18002949 Sensitive lineage2.2.1 None
SRR18002956 HR-TB lineage2.2.1 None
SRR18002963 Other lineage2.2.1 None
SRR18002964 Other lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18003007 MDR-TB lineage4.5 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
SRR18003036 Other lineage2.2.1 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003009 MDR-TB lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR18003032 Other lineage2.2.1 None
SRR18003045 Other lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18003044 MDR-TB lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18003049 Other lineage2.2.1 None
SRR19303818 Other lineage4.3.4.2 None
SRR18913779 Other lineage3 None
SRR19303899 Other lineage3 None
SRR19303815 Other lineage4.8 None
SRR19303817 Other lineage2.2.1 None
SRR19304104 Other lineage4.8 None
SRR19303917 Other lineage2.2.1 None
SRR19304029 Other lineage4.8 None
SRR19304115 Other lineage4.1.2.1 None
SRR21240038 Other lineage4.1.2.1 None
SRR20632814 Sensitive lineage4 None
SRR21239778 Sensitive lineage4.3.3 None
SRR21240029 Sensitive lineage4.3.3 None
SRR21240194 HR-TB lineage4.4.1.1 None
SRR21240064 Sensitive lineage4.3.3 None
SRR21240138 Sensitive lineage4.1.2.1 None
SRR21240077 Other lineage4.1.2.1 None
SRR22048550 Other lineage1.1.3.1 None
SRR21277822 Sensitive lineage2.2.1.1 None
SRR21240239 Sensitive lineage4.1.2.1 None
SRR21657198 HR-TB lineage4.3.3 None
SRR21675848 Other lineage1.1.3.1 None
SRR21713567 Sensitive lineage4.5 None
SRR21727760 Other lineage2.2.1 None
SRR21737226 Sensitive lineage4.5 None
ERR181771 Sensitive lineage3.1.1 None
ERR190332 Sensitive lineage4.3.4.1 None
ERR176780 Sensitive lineage4.9 None
ERR161045 Sensitive lineage4.3.4.2.1 None
ERR161125 Sensitive lineage4.3.4 None
ERR163988 Sensitive lineage4.1.2 None
ERR181750 Sensitive lineage1.1.3.2 None
SRR22175227 Pre-XDR-TB lineage3 None
SRR22424778 RR-TB lineage2.2.1.1 None
ERR176781 Sensitive lineage1.1.3.2 None
ERR4814690 Sensitive lineage2.2.1 None
ERR1679639 Other lineage4.6.4 None
ERR2027230 Other lineage4.2.2.2 None
ERR171142 Other lineage4.9;lineage3.1.1 None
ERR176450 Sensitive lineage4.1.1 None
ERR176475 Sensitive lineage4.3.4.2.1 None
ERR176482 Sensitive lineage4.3.4.2.1 None
ERR190388 Sensitive lineage4.9 None
SRR3675265 Other lineage4 None
ERR176740 HR-TB None
SRR3675513 Other lineage4.8 None
ERR2027232 Other lineage4.3.4.2 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR212042 HR-TB lineage3.1.1 None
ERR221563 Sensitive lineage1.1.3.2 mw
ERR2027290 RR-TB lineage3.1 None
ERR212015 Sensitive lineage4.8 None
ERR212035 Sensitive lineage4.3.4.2.1 None
ERR2027291 Sensitive lineage3.1.3 None
ERR4816470 Other lineage3 None
ERR212082 Sensitive lineage4.9.1 None
ERR4816403 Other lineage6.2.3 None
ERR216910 Sensitive lineage4.3.4.2.1 None
SRR3732580 MDR-TB lineage4.3.3 None
ERR216950 Other lineage1.1.3.2 None
ERR216949 Sensitive lineage4 None
ERR181906 Sensitive lineage3.1.1 mw
ERR2179850 Sensitive lineage4 None
ERR176796 Sensitive lineage1.1.3.2 mw
SRR5818386 Other None
ERR221583 Sensitive lineage4.1.2 None
ERR176801 Sensitive lineage4.3.4.2.1 mw
ERR176814 Sensitive lineage4.3.4.2.1 mw
ERR4817917 Other lineage2.2.1 None
DRR184902 Sensitive lineage4.8;lineage2.2.1 vn
ERR2179816 Sensitive lineage4 None
ERR4818663 Other lineage3 None
ERR2179695 Sensitive lineage4.5 None
SRR5074094 HR-TB lineage2.2.1.1 None
ERR4818825 HR-TB lineage4.1.2.1 None
SRR5067471 Sensitive lineage2.2.1 None
SRR5067293 Sensitive lineage2.2.1 vn
ERR3148155 Sensitive lineage4.3.2 None
ERR2513259 Other lineage3 None
ERR4819262 Other lineage4.1.2.1 None
SRR5007155 HR-TB lineage4.1.2.1 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
SRR5007204 Other lineage4.1.2.1 None
SRR5818458 Other None
ERR3275709 HR-TB lineage3 nl
ERR4819910 Other lineage4.9 None
ERR4819706 MDR-TB lineage4.3.4.2 None
SRR5818445 Other None
SAMN02585942 Sensitive lineage4.1.2 None
ERR2653138 MDR-TB lineage4.1.2.1 None
ERR2179847 Sensitive lineage3 None
ERR2693240 Other La1.8.1 None
ERR2652981 Sensitive lineage4.1.2.1 None
ERR161113 Other lineage4.8 mw
ERR2660490 Sensitive lineage4.3.2.1 None
ERR2660441 Sensitive lineage1.1.3.1 None
ERR2660499 Sensitive lineage4.1.1.3 None
ERR2660498 Sensitive lineage4.3.4.2.1 None
ERR2660536 Sensitive lineage2.2.1 None
ERR2660542 Sensitive lineage4.3.2.1;lineage2.2.1 None
ERR4822114 Other lineage4.1.2.1 None
ERR2660545 Sensitive lineage4.3.2.1 None
SRR6045613 Other lineage3.1.3 None
SRR6045584 Sensitive lineage4.1.2.1 None
SRR5818397 Other lineage4.9 None
SRR5818385 Other lineage4.9 None
SRR5818395 Sensitive lineage4.9 None
SRR5818398 Other lineage4.9 None
SRR5818388 Other lineage4.9 None
SRR5818408 Other lineage4.9 None
SRR5818411 MDR-TB lineage4.9 None
SRR5818423 MDR-TB lineage4.9 None
SRR5818414 Other lineage4.9 None
SRR5818432 MDR-TB lineage4.9 None
SRR6046440 Other lineage3.1.2.2 None
SRR5818425 Other lineage4.9 None
SRR5818448 Other lineage4.9 None
SRR5818459 Other lineage4.9 None
SRR5818460 Other lineage4.9 None
SRR6045399 Other None
ERR2851355 MDR-TB lineage3 None
ERR4829333 RR-TB lineage4 None
SRR5818464 Other lineage4.9 None
SRR5818462 Other lineage4.9 None
SRR5818630 Other lineage2.2.1 None
SRR6045843 Other lineage4.2.2.2 None
SRR6044925 Sensitive lineage4.9 None
SRR6045992 Other lineage3 None
ERR2843536 Other lineage2.2.1 None
SRR6046484 Other lineage1.2.2.2 None
SRR6367397 Other lineage4.1.2.1 None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6484983 Sensitive lineage4.2.1 None
ERR485006 HR-TB lineage4.9 None
SRR6397389 Sensitive lineage4.1.2.1 None
ERR3077969 Other La1.3 None
SRR6153231 Sensitive lineage4.4.1.2 None
ERR4872193 MDR-TB lineage4.6 None
ERR502480 Other lineage5.1.1 None
SRR6982099 Sensitive lineage4.3.4.2.1 None
SRR6824550 Sensitive lineage4.5 None
SRR6797423 Sensitive lineage1.1.3.1 None
SRR6797751 MDR-TB lineage2.2.1 None
SRR6785301 Sensitive lineage2.2.1 None
SRR6982213 Sensitive lineage4.3.2.1 None
SRR6896532 Other lineage4.9 None
SRR6982349 Sensitive lineage2.2.1 None
SRR6824516 Sensitive lineage2.2.1.1 None
SRR6982053 Sensitive lineage4.9;lineage4.3.4.1 None
SRR6824603 Sensitive lineage4.4.2 None
ERR4816711 Sensitive lineage4.1.1.1 gb