EBG00000313339 - n.1271delC
Drug resistance types
63 Sensitive
10 RR-TB
10 HR-TB
12 MDR-TB
7 Pre-XDR-TB
1 XDR-TB
33 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.2.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.9 | 26 |
| lineage2.2.2 | 8 |
| lineage4.3.4.1 | 3 |
| lineage4.3.3 | 1 |
| lineage2.2.2;lineage4.9 | 1 |
| lineage4.1.2.1 | 3 |
| lineage1.1.2 | 2 |
| lineage4.3.2.1 | 2 |
| lineage3 | 4 |
| La1.7.1 | 1 |
| lineage2.2.1 | 9 |
| lineage4.1.2 | 7 |
| lineage3.1.1 | 5 |
| La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.8.1 | 7 |
| lineage4 | 1 |
| lineage4.3.4.2.1 | 8 |
| lineage1.1.1 | 2 |
| lineage4.9.1 | 1 |
| La1.3 | 2 |
| lineage4.1.1.3 | 2 |
| La1.4 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.6.1.1 | 3 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage5.1.1 | 3 |
| lineage1.1.3.2 | 2 |
| lineage4.4.1.2 | 2 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.8 | 7 |
| lineage4.9;lineage5.1.1 | 1 |
| lineage4.5 | 1 |
| lineage6.1.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.1.3 | 1 |
| lineage4.2.1 | 1 |
| lineage3;lineage4 | 1 |
| lineage1.1.1.1 | 1 |
| lineage5.1.4 | 1 |
| La1.8.1;lineage4 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 136 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341462 | Pre-XDR-TB | lineage3.1.2.1 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | SRR6044925 | Sensitive | lineage4.9 | None | ERR1873561 | XDR-TB | lineage2.2.2 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | SRR124452 | Sensitive | lineage2.2.2;lineage4.9 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | SRR12882699 | Sensitive | lineage1.1.2 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR1140716 | Other | lineage3 | None | SRR1792247 | Other | La1.7.1 | None | ERR216949 | Sensitive | lineage4.3.4.1 | None | ERR736805 | Sensitive | lineage2.2.1 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR1063890 | Sensitive | lineage3.1.1 | None | ERR323036 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR4188395 | Sensitive | La1.8.1 | None | ERR161125 | Sensitive | lineage4 | None | ERR987719 | HR-TB | lineage3 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | SRR4033203 | Sensitive | lineage4.9 | None | ERR718268 | Sensitive | lineage1.1.1 | None | ERR245810 | Sensitive | lineage4.9.1 | None | ERR4769471 | Other | La1.3 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4820030 | Other | lineage4.9 | None | SRR16278273 | Other | La1.4 | None | DRR184629 | Other | lineage2.2.1 | None | ERR1063847 | Sensitive | lineage3.1.1 | None | SRR1182965 | Other | lineage4.9 | None | ERR221608 | Sensitive | lineage1.2.2.2 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SAMN02567682 | Other | lineage4.6.1.1 | ug | ERR751729 | Other | lineage1.1.1 | None | SRR1011488 | Sensitive | lineage2.2.1 | None | SRR6982053 | Sensitive | lineage4.3.4.1;lineage4.9 | None | ERR502480 | Other | lineage5.1.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR4769537 | Sensitive | lineage4.9 | None | ERR161201 | Sensitive | lineage1.1.3.2 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | ERR216950 | Sensitive | lineage1.1.3.2 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR779662 | Sensitive | lineage3.1.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR4818904 | Other | lineage4.8 | None | SRR1173170 | Other | lineage4.9 | None | ERR1082121 | Sensitive | lineage4.9;lineage5.1.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | ERR1023250 | Sensitive | lineage6.1.1 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR1873463 | MDR-TB | lineage2.2.2 | None | SRR14782537 | Pre-XDR-TB | lineage2.2.1 | None | ERR176450 | Sensitive | lineage4.1.1.3 | None | ERR5311088 | Sensitive | La1.8.1 | None | SRR1011480 | MDR-TB | lineage4.8 | None | ERR212042 | HR-TB | lineage3.1.1 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | ERR4769549 | Sensitive | lineage4.9 | None | ERR502494 | Other | lineage5.1.1 | None | ERR4798769 | Other | lineage1.1.3.3 | None | SAMN02350437 | MDR-TB | lineage4.8 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR4188213 | Other | La1.8.1 | None | ERR161170 | Sensitive | lineage4.3.4.1 | None | ERR2179737 | HR-TB | lineage4.2.1 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | SRR124453 | HR-TB | lineage2.2.2 | None | ERR108424 | Sensitive | lineage4.8 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR245764 | HR-TB | lineage3.1.1 | None | SRR4034393 | MDR-TB | lineage4.1.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | ERR702423 | Sensitive | lineage5.1.4 | None | ERR1063873 | Sensitive | lineage4.3.4.2.1 | None | ERR1203071 | Sensitive | lineage4.8 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR1873549 | Pre-XDR-TB | lineage2.2.2 | None | SRR1238558 | Other | lineage4.9 | None | ERR1873437 | HR-TB | lineage2.2.2 | None | SRR10482948 | Other | La1.8.1 | None | ERR245740 | Sensitive | lineage4.1.2 | None | SRR1062851 | MDR-TB | lineage4.8 | None | SRR1173281 | Other | lineage3 | None | SRR17406750 | Other | lineage1.1.2 | None | ERR4187819 | Sensitive | La1.8.1;lineage4 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR161045 | Sensitive | lineage4.3.4.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR5074094 | HR-TB | lineage2.2.1.1 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | SRR1172807 | Sensitive | lineage4.9 | None | ERR163988 | Sensitive | lineage4.1.2 | None | ERR502474 | RR-TB | lineage4.9 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | ERR4188021 | Other | La1.8.1 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4769482 | Sensitive | lineage4.9 | None | ERR176780 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | ERR5311086 | Sensitive | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | SRR22175227 | HR-TB | lineage3 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | SRR1183098 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR3797007 | Other | La1.8.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR5758436 | Other | lineage2.2.2 | None | ERR4769470 | Sensitive | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR5311076 | Other | La1.8.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4769462 | Other | La1.3 | None | SRR1173770 | Other | lineage4.9 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None |
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