EBG00000313339 - n.1271delC


Drug resistance types
75 Sensitive 12 RR-TB 12 HR-TB 20 MDR-TB 15 Pre-XDR-TB 0 XDR-TB 49 Other
lineage Counts
lineage Count
lineage4.3.4 1
lineage4.1.1 1
lineage4.3.4.2.1 10
lineage1.1.3.2 3
lineage4.3.4.1 2
lineage4.1.2 8
lineage4.1.3 1
lineage4.6.1.1 4
lineage4.9 28
lineage4.9.1 2
lineage3.1.1 6
lineage1.2.2.2 2
lineage4 3
lineage4.3.4.2 2
lineage4.1.2.1 4
lineage4.2 1
lineage4.8 7
lineage2.2.1 16
lineage2.2.1.1 1
lineage3.1.2.1 2
lineage4.4.1.1.1 3
lineage4.4.1.2 2
lineage4.3.2.1 3
lineage5.1.1 3
5
lineage4.9;lineage4.3.4.1 1
La1.8.1 22
lineage4.9;La1.8.1 1
lineage4.6.2.2 1
La1.8 1
lineage4.1.1.3 2
La1.2 2
La1.3 2
La1 1
lineage2.2.2 4
lineage1.1.3.3 1
lineage1.1.1 2
lineage5.1.4 1
lineage1.1.1.1 1
lineage4.1.2.1.1 1
lineage3 6
lineage4.4.1.1;lineage4.1.2.1 1
La1.6 2
lineage2 1
lineage1.1.2 3
lineage1.1.3.1 1
La1.7.1 3
La1.4 1
lineage4.3.3 1
lineage4.5 1
spoligotype Counts
spoligotype Count
None 183
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR161125 Sensitive lineage4.3.4 None
ERR176450 Sensitive lineage4.1.1 None
ERR181749 Sensitive lineage4.3.4.2.1 None
ERR181750 Sensitive lineage1.1.3.2 None
ERR161170 Sensitive lineage4.3.4.1 None
ERR163988 Sensitive lineage4.1.2 None
ERR4816198 Sensitive lineage4.1.3 None
ERR176547 Sensitive lineage4.6.1.1 None
ERR176475 Sensitive lineage4.3.4.2.1 None
ERR190388 Sensitive lineage4.9 None
ERR212082 Sensitive lineage4.9.1 None
ERR212042 HR-TB lineage3.1.1 None
ERR216950 Other lineage1.1.3.2 None
ERR212109 Sensitive lineage1.2.2.2 None
ERR216930 Sensitive lineage4.3.4.1 None
ERR216949 Sensitive lineage4 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR216986 Sensitive lineage4.3.4.2.1 None
SRR4034393 MDR-TB lineage4.1.2.1 None
ERR2179737 HR-TB lineage4.2 None
ERR2179850 Sensitive lineage4 None
SRR4033203 Sensitive lineage4.9 None
ERR221583 Sensitive lineage4.1.2 None
ERR221608 Sensitive lineage1.2.2.2 None
SAMN02350437 MDR-TB lineage4.8 None
SAMN02350446 Sensitive lineage2.2.1 None
ERR4818904 Other lineage4.8 None
SRR5153236 MDR-TB lineage2.2.1 None
SRR5074094 HR-TB lineage2.2.1.1 None
ERR245740 Sensitive lineage4.1.2 None
ERR245810 Sensitive lineage4.9.1 None
ERR4819383 RR-TB lineage4.9 None
SRR5341462 Pre-XDR-TB lineage3.1.2.1 None
ERR4819863 RR-TB lineage4.9 None
SAMN02567682 Other lineage4.6.1.1 ug
ERR4820030 Other lineage4.9 None
SAMN02585942 Sensitive lineage4.1.2 None
ERR2660498 Sensitive lineage4.3.4.2.1 None
ERR279477 Sensitive lineage4.4.1.1.1 None
ERR4821272 RR-TB lineage4.1.2.1 None
SRR6044925 Sensitive lineage4.9 None
ERR4821172 RR-TB lineage4.9 None
SRR6045957 Other lineage4.9 None
ERR2843536 Other lineage2.2.1 None
ERR502479 RR-TB lineage4.9 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
SRR6153231 Sensitive lineage4.4.1.2 None
ERR502478 RR-TB lineage4.9 None
SRR6982213 Sensitive lineage4.3.2.1 None
ERR502480 Other lineage5.1.1 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR502494 Other lineage5.1.1 None
SRR6982349 Sensitive lineage2.2.1 None
ERR323036 HR-TB None
SRR6982053 Sensitive lineage4.9;lineage4.3.4.1 None
ERR495008 Sensitive lineage4.4.1.1.1 None
ERR5087675 Other La1.8.1 None
ERR5311093 Other La1.8.1 None
ERR5087606 Other La1.8.1 None
ERR5311076 Other La1.8.1 None
ERR323048 Pre-XDR-TB lineage4.9 None
ERR5087707 Other La1.8.1 None
ERR5311086 Sensitive lineage4.9;La1.8.1 None
ERR5311085 Other La1.8.1 None
ERR5311088 Other La1.8.1 None
SRR8346061 Pre-XDR-TB lineage2.2.1 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR9971168 Other lineage4.3.2.1 None
ERR323068 Sensitive lineage4.9 None
ERR323061 Sensitive lineage4.9 None
DRR184629 Other lineage2.2.1 None
ERR1063847 Sensitive lineage3.1.1 None
ERR1034638 Pre-XDR-TB lineage2.2.1 None
ERR1063882 Sensitive lineage4.3.4.2 None
ERR1063873 Sensitive lineage4.3.4.2.1 None
ERR108476 Sensitive lineage4.1.2.1 None
ERR1063890 Sensitive lineage3.1.1 None
ERR1082134 Sensitive lineage5.1.1 None
ERR1082121 Sensitive lineage4.9 None
ERR108424 Sensitive lineage4.8 None
ERR3439443 Other La1.8.1 None
ERR1203071 Sensitive lineage4.8 None
ERR133816 MDR-TB lineage2.2.1 None
ERR1203078 Sensitive lineage4.6.2.2 None
ERR3797007 Other La1.8.1 None
ERR4188160 Other La1.8.1 None
ERR4187819 Other La1.8 None
ERR4187916 Other La1.8.1 None
ERR4188021 Other La1.8.1 None
ERR4187636 Other La1.8.1 None
ERR4187800 Other La1.8.1 None
ERR4187869 Other La1.8.1 None
ERR4188395 Other La1.8.1 None
ERR4188187 Other La1.8.1 None
ERR4188222 MDR-TB La1.8.1 None
ERR4188381 Other La1.8.1 None
ERR4188213 HR-TB La1.8.1 None
ERR4188254 Other La1.8.1 None
ERR473278 Sensitive lineage4.9 None
ERR473341 Sensitive lineage4.1.1.3 None
ERR473303 Sensitive lineage4.9 None
ERR473304 Sensitive lineage2.2.1 None
ERR4769470 Sensitive lineage4.9 None
ERR473367 Sensitive lineage4.9 None
ERR4772218 Other La1.2 None
ERR4769462 Other La1.3 None
ERR4769471 Other La1.3 None
ERR4769537 Sensitive lineage4.9 None
ERR4769549 Sensitive lineage4.9 None
ERR4769467 Sensitive lineage4.9 None
ERR4769482 Sensitive La1 None
ERR4772210 Other La1.2 None
ERR6052110 Pre-XDR-TB lineage2.2.2 None
ERR4798769 Other lineage1.1.3.3 None
ERR6052085 Pre-XDR-TB lineage2.2.2 None
ERR718268 Sensitive lineage1.1.1 None
ERR702423 Sensitive lineage5.1.4 None
ERR736805 Sensitive lineage2.2.1 None
ERR1873446 Pre-XDR-TB lineage4.1.1.3 None
ERR751729 Other lineage1.1.1 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR1873561 Pre-XDR-TB lineage2.2.2 None
ERR736822 Sensitive lineage4.4.1.2 None
ERR760877 MDR-TB lineage4.1.2.1.1 None
ERR1873463 MDR-TB lineage2.2.2 None
ERR987719 HR-TB lineage3 None
ERR7821134 Sensitive lineage4.3.2.1 None
ERR779662 Sensitive lineage3.1.1 None
ERR7821131 MDR-TB lineage4.4.1.1.1 None
ERR161201 Sensitive lineage1.1.3.2 None
ERR245764 HR-TB lineage3.1.1 None
SRR1011480 MDR-TB lineage4.8 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1011488 Other lineage2.2.1 None
SRR10482948 Other La1.8.1 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049672 Other lineage3 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1062851 MDR-TB lineage4.8 None
SRR1062859 Sensitive lineage2.2.1 None
SRR10993957 Other La1.6 None
SRR1062928 RR-TB lineage4 None
SRR10993951 RR-TB La1.6 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR1140716 Pre-XDR-TB lineage3 None
SRR1140736 RR-TB None
SRR1173740 Other None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1173281 RR-TB lineage3 None
SRR1172751 HR-TB lineage3.1.2.1 None
SRR1172807 Sensitive lineage4.9 None
SRR1173170 Other lineage4.9 None
SRR1173834 Other lineage4.6.1.1 None
SRR1173770 Other lineage4.9 None
SRR1181085 Sensitive lineage4.1.2 None
SRR1180237 Sensitive lineage4.1.2 None
SRR1182994 Sensitive lineage4.1.2 None
SRR1181242 Sensitive lineage4.1.2 None
SRR124453 HR-TB None
SRR11972390 MDR-TB lineage2.2.1 None
SRR124452 HR-TB lineage2 None
SRR11972378 MDR-TB lineage1.1.2 None
SRR11972434 Sensitive lineage2.2.1 None
SRR12199461 Sensitive lineage1.1.3.1 None
SRR124451 HR-TB None
SRR12882699 Sensitive lineage1.1.2 None
SRR13199739 Other La1.7.1 None
SRR13199738 Other La1.7.1 None
SRR16278273 Other La1.4 None
SRR14782096 MDR-TB lineage2.2.1 None
SRR14782537 Pre-XDR-TB lineage2.2.1 None
SRR17406750 Other lineage1.1.2 None
SRR1792247 Other La1.7.1 None
SRR22175227 Pre-XDR-TB lineage3 None
SRR21240029 Sensitive lineage4.3.3 None
SRR21737226 Sensitive lineage4.5 None
ERR181940 Sensitive lineage3.1.1 None
ERR176780 Sensitive lineage4.9 None
ERR161045 Sensitive lineage4.3.4.2.1 None