EBG00000313339 - n.2030C>T


Drug resistance types
125 Sensitive 3 RR-TB 15 HR-TB 19 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 36 Other
lineage Counts
lineage Count
14
lineage4.3.4.2.1 8
lineage4.9 36
lineage1.2.2.2 2
La1.8.1 5
lineage4.3.4 1
lineage4.1.1 8
lineage2.2.1 26
lineage3.1 4
lineage4.1.2.1 5
lineage3.1.1 4
lineage4.3.2.1;lineage3.1.1 1
lineage4.1.2 7
lineage4.9.1 2
lineage3.1.2 9
lineage4.3.3 10
lineage3 9
lineage1.1.3.1 2
lineage4.1.1.3 3
lineage4.4.1.2 2
lineage4.6.2.2 2
lineage5.1.1 1
lineage4 3
lineage4.8 5
lineage4.4.1.1 3
lineage1.1.3.2 1
lineage2.2 3
lineage4.1.1.2 1
lineage4.4 1
lineage4.3.2.1 5
lineage1 1
lineage4.7 1
lineage4.3.4.2 4
lineage4.9;lineage4.3.4.1 1
lineage4;lineage2 1
lineage4.8;lineage4.2.1 1
lineage4.3.4.1;lineage1.1.2 1
lineage3.1.2.2 1
La1.3 2
lineage2.2.2 3
lineage4.2.2.2 1
lineage1.1.1 1
lineage1.2.2.1 1
lineage4.4.1.1.1 1
lineage2.2.1.1 1
lineage2 1
lineage4.9;lineage4.4.2 1
La1.7.1 1
lineage4.5 1
spoligotype Counts
spoligotype Count
None 208
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR176771 Sensitive None
ERR176475 Sensitive lineage4.3.4.2.1 None
ERR161014 Sensitive lineage4.3.4.2.1 None
ERR161173 Sensitive lineage4.3.4.2.1 None
ERR176780 Sensitive lineage4.9 None
SRR3105736 Other lineage1.2.2.2 None
ERR1815548 Other La1.8.1 None
ERR161125 Sensitive lineage4.3.4 None
ERR176450 Sensitive lineage4.1.1 None
ERR192070 Other None
ERR245716 Sensitive lineage2.2.1 None
ERR234111 MDR-TB lineage3.1 np
SRR4033203 Sensitive lineage4.9 None
SRR4034393 MDR-TB lineage4.1.2.1 None
SRR4034769 Other lineage4.1.1 None
ERR212042 HR-TB lineage3.1.1 None
SRR4033190 HR-TB lineage4.9 None
ERR245795 Sensitive lineage4.3.2.1;lineage3.1.1 None
ERR245740 Sensitive lineage4.1.2 None
ERR245810 Sensitive lineage4.9.1 None
ERR11067192 Sensitive lineage3.1.2 None
ERR4817605 Sensitive lineage4.3.3 None
SAMN02350446 Sensitive lineage2.2.1 None
SRR5341460 Other lineage3 None
SRR6153224 Sensitive lineage3.1.2 ca
SRR5341430 Other lineage3 None
SRR2100324 MDR-TB lineage3.1 None
ERR4820614 Other lineage3.1.2 None
ERR2653138 MDR-TB lineage4.1.2.1 None
SAMN02585942 Sensitive lineage4.1.2 None
SRR6044925 Sensitive lineage4.9 None
ERR2660441 Sensitive lineage1.1.3.1 None
ERR2660499 Sensitive lineage4.1.1.3 None
ERR266558 Sensitive lineage3 None
ERR502483 Sensitive lineage4.9 None
SRR6045205 Sensitive lineage4.9 None
SRR6045289 Other None
SRR7585438 Pre-XDR-TB lineage3.1.2 in
ERR2516931 MDR-TB lineage3.1.2 gb
SRR6153231 Sensitive lineage4.4.1.2 None
ERR502482 Sensitive lineage4.9 None
ERR4831529 Pre-XDR-TB lineage2.2.1 None
ERR4797658 Other lineage3.1.2 in
ERR2843536 Other lineage2.2.1 None
SRR6484909 Sensitive lineage2.2.1 None
SRR6982078 Sensitive None
ERR502472 Other lineage4.6.2.2 None
ERR502490 Sensitive lineage4.9 None
ERR502485 Sensitive lineage4.9 None
ERR502480 Other lineage5.1.1 None
ERR502484 Sensitive lineage4.9 None
ERR502486 Sensitive lineage4.9 None
ERR502489 Sensitive lineage4.9 None
ERR502497 Sensitive lineage4.9 None
ERR502493 Sensitive lineage4.9 None
ERR502498 Sensitive lineage4.9 None
ERR502492 Sensitive lineage4.9 None
SRR6982099 Sensitive lineage4.3.4.2.1 None
SRR6856087 Sensitive lineage4 None
SRR6896162 Sensitive lineage4.9 None
SRR6856119 Sensitive lineage2.2.1 None
SRR6982414 Sensitive lineage4.9 None
SRR6982104 Sensitive lineage2.2.1 None
SRR6982115 Sensitive lineage4 None
SRR6982106 Sensitive lineage4.8 None
SRR6982138 Sensitive lineage4 None
SRR6982418 Sensitive lineage4.1.1.3 None
SRR6982508 Sensitive lineage4.9 None
SRR6896348 Sensitive lineage4.1.2.1 None
SRR6896340 HR-TB lineage4.4.1.1 None
SRR6896339 MDR-TB lineage2.2.1 None
SRR6982175 Other lineage1.1.3.2 None
SRR6982430 Other lineage4.3.4.2.1 None
SRR6982178 Sensitive lineage2.2 None
SRR6982180 Sensitive lineage4.1.1.2 None
SRR6982195 RR-TB lineage4.4 None
SRR6982196 Sensitive None
SRR6982213 Sensitive lineage4.3.2.1 None
SRR6982198 HR-TB lineage1 None
SRR6982297 Sensitive lineage4.1.1 None
SRR6982257 RR-TB lineage4.1.2.1 None
SRR6982272 Sensitive lineage4.9 None
SRR6982227 Other lineage4.1.1 None
SRR6797374 Sensitive lineage3.1.2 None
SRR6981922 Sensitive lineage4.3.2.1 None
SRR6982328 HR-TB lineage3.1.1 None
SRR6982337 Sensitive lineage4.7 None
SRR6982472 Sensitive lineage4.4.1.1 None
SRR6982349 Sensitive lineage2.2.1 None
SRR6982465 Sensitive lineage4.3.4.2 None
SRR6981912 Sensitive None
SRR6855718 Sensitive lineage4.8 None
SRR6982471 Sensitive lineage2.2.1 None
SRR6981941 Sensitive lineage4.3.4.2.1 None
SRR6982363 Sensitive lineage4.3.3 None
SRR6981962 Sensitive None
SRR6855915 Sensitive lineage4.9 None
SRR6981977 Sensitive lineage2.2.1 None
SRR6981993 Other lineage4.3.2.1 None
SRR6982385 Sensitive lineage4.1.2 None
SRR6981981 Other lineage4.3.3 None
SRR6982011 Other lineage4.1.1 None
SRR6982014 Other lineage4.1.1 None
SRR6855963 RR-TB lineage2.2.1 None
SRR6982026 Sensitive lineage4.3.3 None
SRR6982035 Sensitive lineage4.9 None
SRR6982037 Sensitive lineage4.1.1 None
SRR6982043 Sensitive lineage4.4.1.1 None
SRR6982398 MDR-TB lineage2.2 None
SRR6982048 HR-TB lineage4.3.2.1 None
SRR6982053 Sensitive lineage4.9;lineage4.3.4.1 None
SRR6982058 HR-TB lineage2.2.1 None
SRR6856032 Sensitive lineage2.2.1 None
ERR2510544 MDR-TB lineage3.1.2 pk
SRR6982405 Sensitive None
SRR6982075 Sensitive lineage3 None
SRR6982076 Sensitive lineage4.9 None
SRR6982077 MDR-TB lineage4.3.2.1 None
ERR323036 HR-TB None
ERR5311088 Other La1.8.1 None
ERR5087763 Other La1.8.1 None
SRR6982558 Other lineage4.3.4.2 None
SRR6982514 Sensitive lineage4.3.3 None
SRR6982510 Sensitive lineage4;lineage2 None
ERR037501 Sensitive lineage4.3.4.2.1 None
SRR7645808 HR-TB lineage4.8;lineage4.2.1 None
ERR323061 Sensitive lineage4.9 None
ERR323068 Sensitive lineage4.9 None
ERR036233 Sensitive lineage4.3.4.1;lineage1.1.2 None
ERR037234 Sensitive lineage4.9 None
SRR8600069 Other La1.8.1 None
SRR9971195 MDR-TB lineage4.3.3 None
ERR323048 Pre-XDR-TB lineage4.9 None
ERR031465 MDR-TB lineage3.1 None
ERR1063882 Sensitive lineage4.3.4.2 None
ERR072033 Sensitive lineage3.1.2.2 None
ERR144568 Pre-XDR-TB None
ERR108424 Sensitive lineage4.8 None
ERR108476 Sensitive lineage4.1.2.1 None
ERR114476 MDR-TB lineage3.1 None
ERR133816 MDR-TB lineage2.2.1 None
ERR403364 Sensitive lineage3 None
ERR3324325 MDR-TB lineage4.6.2.2 None
ERR473303 Sensitive lineage4.9 None
ERR4627369 Other La1.8.1 None
ERR473278 Sensitive lineage4.9 None
ERR4187921 Other None
ERR4188375 Sensitive lineage4.9 None
ERR473279 Other lineage4.9 None
ERR473341 Sensitive lineage4.1.1.3 None
ERR4769505 Other lineage4.9 None
ERR473367 Sensitive lineage4.9 None
ERR4769428 Other La1.3 None
ERR4769470 Sensitive lineage4.9 None
ERR4769527 Sensitive lineage4.9 None
ERR2514466 Sensitive lineage3 gb
ERR4772207 Other La1.3 None
ERR245846 Sensitive lineage2.2.1 None
ERR5865119 MDR-TB lineage2.2.1 None
ERR5987345 Pre-XDR-TB lineage2.2.1 None
ERR6052110 Pre-XDR-TB lineage2.2.2 None
ERR6397161 Other lineage4.2.2.2 None
ERR6052085 Pre-XDR-TB lineage2.2.2 None
ERR6397155 HR-TB lineage3 None
ERR6397183 Sensitive lineage3 None
ERR718268 Sensitive lineage1.1.1 None
ERR245662 Sensitive lineage1.2.2.1 None
ERR736816 Other lineage4.9 None
ERR736805 Sensitive lineage2.2.1 None
ERR9117827 Other lineage1.2.2.2 None
ERR036242 Sensitive lineage4.3.4.2.1 None
ERR245764 HR-TB lineage3.1.1 None
ERR736822 Sensitive lineage4.4.1.2 None
ERR779662 Sensitive lineage3.1.1 None
ERR7821131 MDR-TB lineage4.4.1.1.1 None
SRR22137387 Sensitive lineage3.1.2 None
ERR036191 Sensitive lineage4.9.1 None
SRR10851629 Sensitive lineage4.3.3 None
ERR987695 HR-TB lineage4.3.4.2 None
SRR1011488 Other lineage2.2.1 None
SRR1062859 Sensitive lineage2.2.1 None
SRR1181085 Sensitive lineage4.1.2 None
SRR1173848 Pre-XDR-TB lineage2.2.2 None
SRR1180237 Sensitive lineage4.1.2 None
SRR1181319 Other lineage2.2.1 None
SRR1181136 Sensitive lineage2.2 None
SRR1181242 Sensitive lineage4.1.2 None
SRR1182994 Sensitive lineage4.1.2 None
SRR12199461 Sensitive lineage1.1.3.1 None
SRR11871419 Pre-XDR-TB lineage2.2.1 None
SRR11972212 MDR-TB lineage2.2.1.1 None
SRR124452 HR-TB lineage2 None
SRR12199468 Sensitive lineage4.9;lineage4.4.2 None
SRR124451 HR-TB None
SRR2101803 Sensitive lineage4.3.3 None
SRR124453 HR-TB None
SRR15368914 MDR-TB lineage2.2.1 None
SRR16962459 Sensitive lineage4.8 None
SRR19576436 Sensitive None
SRR2101312 MDR-TB lineage2.2.1 None
SRR2101681 Sensitive lineage4.8 None
SRR2101774 Sensitive lineage2.2.1 None
SRR1792247 Other La1.7.1 None
SRR2101617 Other lineage4.1.1 None
SRR21675637 Sensitive lineage4.3.3 None
SRR21737226 Sensitive lineage4.5 None
SRR22248464 Sensitive lineage4.3.3 None
SRR22175227 Pre-XDR-TB lineage3 None