EBG00000313339 - n.2030C>T
Drug resistance types
137 Sensitive
0 RR-TB
5 HR-TB
15 MDR-TB
6 Pre-XDR-TB
1 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.2 | 11 |
| lineage4.3.4.2.1 | 5 |
| lineage4.9 | 69 |
| lineage3 | 7 |
| lineage4.1.2 | 5 |
| lineage2.2.1 | 18 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage3.1 | 4 |
| lineage4.1.2.1 | 3 |
| lineage5.1.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3.1.1 | 3 |
| lineage3.1.2.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage2.2.2 | 7 |
| lineage4.8 | 4 |
| lineage4.1.1 | 1 |
| lineage4.1.1.1 | 3 |
| lineage4.3.2.1 | 3 |
| lineage4.6.2.2 | 2 |
| lineage4.2.2.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.1.2 | 2 |
| lineage4.9.1 | 2 |
| lineage1.1.2;lineage4.3.4.1 | 1 |
| lineage5.1 | 1 |
| lineage4.3.4.2 | 2 |
| lineage4.5 | 1 |
| La1.7.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.1.1.1;lineage4.9 | 1 |
| La1.2.BCG | 1 |
| La1.8.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage3.1.1;lineage4.3.2.1 | 1 |
| lineage2.2.2;lineage4.9 | 1 |
| lineage1.2.2.1 | 1 |
| lineage4.3.2.1;lineage4.9 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4 | 1 |
| 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 176 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR28045379 | Sensitive | lineage3.1.2 | None | SRR28045378 | Sensitive | lineage3.1.2 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | ERR502483 | Sensitive | lineage4.9 | None | SRR6982075 | Sensitive | lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | SRR7443740 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR6397155 | HR-TB | lineage3 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR7504782 | Sensitive | lineage4.9 | None | SRR7443749 | Sensitive | lineage4.9 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR7444074 | Sensitive | lineage4.9 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR7504783 | Sensitive | lineage4.9 | None | ERR266558 | Sensitive | lineage3 | None | SRR7443767 | Sensitive | lineage4.9 | None | SRR5341430 | Other | lineage3 | None | SRR7443733 | Sensitive | lineage4.9 | None | SRR6982398 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR7443734 | Sensitive | lineage4.9 | None | SRR2100324 | MDR-TB | lineage3.1 | None | SRR4034393 | MDR-TB | lineage4.1.2.1 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | ERR1140774 | Sensitive | lineage5.1.1 | None | SRR3725590 | Sensitive | lineage4.9 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | ERR2516931 | MDR-TB | lineage3.1.2 | gb | SRR3105736 | Sensitive | lineage1.2.2.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR7443790 | Sensitive | lineage4.9 | None | ERR245846 | Sensitive | lineage2.2.1 | None | SRR3725593 | Sensitive | lineage4.9 | None | SRR6797374 | Sensitive | lineage3.1.2 | None | ERR037501 | Sensitive | lineage4.3.4.2.1 | None | SRR6982328 | Other | lineage3.1.1 | None | SRR7443747 | Sensitive | lineage4.9 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | SRR7444102 | Sensitive | lineage4.9 | None | SRR6982138 | Sensitive | lineage4.1.1.3 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR11067192 | Sensitive | lineage3.1.2 | None | ERR502485 | Sensitive | lineage4.9 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR7443738 | Sensitive | lineage4.9 | None | SRR7504779 | Sensitive | lineage4.9 | None | SRR7443730 | Sensitive | lineage4.9 | None | SRR6982014 | Sensitive | lineage4.1.1 | None | SRR124451 | Sensitive | lineage2.2.2 | None | SRR22137387 | Sensitive | lineage3.1.2 | None | SRR2101617 | Sensitive | lineage4.1.1.1 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR7443739 | Sensitive | lineage4.9 | None | SRR7443768 | Sensitive | lineage4.9 | None | ERR245740 | Sensitive | lineage4.1.2 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR7585438 | XDR-TB | lineage3.1.2 | in | ERR403364 | Sensitive | lineage3 | None | SRR7443741 | Sensitive | lineage4.9 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | SRR7443757 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | SRR6982078 | Sensitive | lineage4.9 | None | SRR7443725 | Sensitive | lineage4.9 | None | ERR779662 | Sensitive | lineage3.1.1 | None | ERR926168 | Sensitive | lineage4.9 | None | SRR6982558 | Sensitive | lineage4.3.4.2.1 | None | ERR108424 | Sensitive | lineage4.8 | None | SRR3725591 | Sensitive | lineage4.9 | None | ERR502472 | Sensitive | lineage4.6.2.2 | None | ERR6397161 | Other | lineage4.2.2.2 | None | ERR1873549 | Pre-XDR-TB | lineage2.2.2 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | ERR2653138 | MDR-TB | lineage4.1.2.1 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR7444103 | Sensitive | lineage4.9 | None | ERR5758436 | Other | lineage2.2.2 | None | SRR6789621 | Other | lineage4.9 | None | ERR1140766 | Sensitive | lineage1.1.2 | None | ERR323068 | Sensitive | lineage4.9 | None | SRR7443722 | Sensitive | lineage4.9 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR7443726 | Sensitive | lineage4.9 | None | ERR502484 | Sensitive | lineage4.9 | None | SRR6982037 | Sensitive | lineage4.1.1.1 | None | SRR7504775 | Sensitive | lineage4.9 | None | ERR245810 | Sensitive | lineage4.9.1 | None | ERR036233 | Sensitive | lineage1.1.2;lineage4.3.4.1 | None | ERR1140792 | HR-TB | lineage5.1 | None | ERR987695 | HR-TB | lineage4.3.4.2 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR7443737 | Sensitive | lineage4.9 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | SRR3725589 | Sensitive | lineage4.9 | None | SRR6982011 | Sensitive | lineage4.1.1.1 | None | ERR4797658 | Other | lineage3.1.2 | in | SRR7504773 | Sensitive | lineage4.9 | None | ERR114476 | MDR-TB | lineage3.1 | None | SRR1011488 | Sensitive | lineage2.2.1 | None | ERR502486 | Sensitive | lineage4.9 | None | SRR3725597 | Sensitive | lineage4.9 | None | SRR7443743 | Sensitive | lineage4.9 | None | ERR234111 | MDR-TB | lineage3.1 | np | SAMN02585942 | Sensitive | lineage4.1.2 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR7443731 | Sensitive | lineage4.9 | None | SRR7444084 | Sensitive | lineage4.9 | None | SRR7443732 | Sensitive | lineage4.9 | None | SRR1173848 | Pre-XDR-TB | lineage2.2.2 | None | ERR2510544 | MDR-TB | lineage3.1.2 | pk | SRR7444071 | Sensitive | lineage4.9 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR6153224 | Sensitive | lineage3.1.2 | ca | SRR1792247 | Other | La1.7.1 | None | SRR1181136 | Sensitive | lineage2.2.1 | None | SRR3725588 | Sensitive | lineage4.9 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | SRR3725596 | Sensitive | lineage4.9 | None | SRR7444072 | Sensitive | lineage4.9 | None | SRR7504786 | Sensitive | lineage4.9 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | ERR245764 | HR-TB | lineage3.1.1 | None | SRR6981941 | Sensitive | lineage4.3.4.2.1 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR7443724 | Sensitive | lineage4.9 | None | SRR6855718 | Other | lineage4.8 | None | SRR7443723 | Sensitive | lineage4.9 | None | SRR6982297 | Sensitive | lineage4.1.1.1;lineage4.9 | None | ERR1140785 | Sensitive | lineage1.1.2 | None | SRR6982076 | Sensitive | lineage4.9 | None | ERR036191 | Sensitive | lineage4.9.1 | None | SRR5341460 | Other | lineage3 | None | SRR7086711 | Other | La1.2.BCG | None | SRR3725595 | Sensitive | lineage4.9 | None | ERR1815548 | Other | La1.8.1 | None | SRR7443736 | Sensitive | lineage4.9 | None | SRR7443751 | Sensitive | lineage4.9 | None | SRR7443752 | Sensitive | lineage4.9 | None | ERR323036 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | ERR245795 | Sensitive | lineage3.1.1;lineage4.3.2.1 | None | SRR124452 | Sensitive | lineage2.2.2;lineage4.9 | None | SRR7443727 | Sensitive | lineage4.9 | None | ERR926173 | Sensitive | lineage4.9 | None | SRR15368914 | MDR-TB | lineage2.2.1 | None | ERR736816 | Other | lineage4.9 | None | SRR124453 | HR-TB | lineage2.2.2 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR036242 | Sensitive | lineage4.3.4.2.1 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | ERR245662 | Sensitive | lineage1.2.2.1 | None | ERR6397183 | Sensitive | lineage3 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | ERR2514466 | Sensitive | lineage3 | gb | ERR031465 | MDR-TB | lineage3.1 | None | SRR6981962 | Sensitive | lineage4.3.2.1 | None | SRR1181319 | Sensitive | lineage2.2.1 | None | SRR6982035 | Sensitive | lineage4.3.2.1;lineage4.9 | None | ERR323048 | Sensitive | lineage4.9 | None | SRR6982053 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR7443735 | Sensitive | lineage4.9 | None | SRR7443769 | Sensitive | lineage4 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR7444098 | Sensitive | lineage4.9 | None | SRR7504776 | Sensitive | lineage4.9 | None | SRR28351323 | Pre-XDR-TB | lineage3.1.2 | None | ERR144568 | Sensitive | None | SRR6982196 | Sensitive | None |
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