EBG00000313339 - n.2030C>T


Drug resistance types
138 Sensitive 0 RR-TB 5 HR-TB 15 MDR-TB 6 Pre-XDR-TB 1 XDR-TB 12 Other
lineage Counts
lineage Count
lineage4.9 69
lineage4.1.2 5
lineage4.8 4
lineage3.1.2 11
lineage4.1.1.1;lineage4.9 1
lineage2.2.2 7
La1.8.1 1
lineage2.2.2;lineage4.9 1
lineage2.2.1 19
lineage5.1 1
lineage4.5 1
lineage3.1.2.2 1
lineage3.1 4
lineage4.3.4.1;lineage4.9 1
lineage4.1.1 1
lineage4.1.1.1 3
lineage4 1
2
lineage4.3.4.2.1 5
La1.7.1 1
lineage4.3.2.1 3
lineage3.1.1 3
lineage3 7
lineage4.6.2.2 2
lineage4.1.2.1 3
lineage1.1.3.1 1
lineage1.1.2 2
lineage1.2.2.2 1
La1.2.BCG 1
La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.9.1 2
lineage1.1.2;lineage4.3.4.1 1
lineage1.2.2.1 1
lineage4.3.4.2 2
lineage4.1.1.3 2
lineage2.2.1;lineage4.9 1
lineage4.3.3 1
lineage5.1.1 1
lineage3.1.1;lineage4.3.2.1 1
lineage4.3.2.1;lineage4.9 1
lineage4.2.2.2 1
spoligotype Counts
spoligotype Count
None 177
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR7443724 Sensitive lineage4.9 None
SRR1180237 Sensitive lineage4.1.2 None
SRR6855718 Other lineage4.8 None
ERR2516931 MDR-TB lineage3.1.2 gb
SRR6982297 Sensitive lineage4.1.1.1;lineage4.9 None
ERR5758436 Other lineage2.2.2 None
SRR3725595 Sensitive lineage4.9 None
ERR1815548 Other La1.8.1 None
SRR7443722 Sensitive lineage4.9 None
SRR1181085 Sensitive lineage4.1.2 None
SRR124452 Sensitive lineage2.2.2;lineage4.9 None
SRR7443727 Sensitive lineage4.9 None
ERR926173 Sensitive lineage4.9 None
SRR15368914 MDR-TB lineage2.2.1 None
ERR736816 Other lineage4.9 None
SRR7443747 Sensitive lineage4.9 None
ERR1140792 HR-TB lineage5.1 None
SRR21737226 Sensitive lineage4.5 None
ERR072033 Sensitive lineage3.1.2.2 None
ERR031465 MDR-TB lineage3.1 None
ERR4797658 Other lineage3.1.2 in
SRR7443738 Sensitive lineage4.9 None
SRR3725597 Sensitive lineage4.9 None
ERR323048 Sensitive lineage4.9 None
SRR6982053 Sensitive lineage4.3.4.1;lineage4.9 None
SRR6982014 Sensitive lineage4.1.1 None
SRR124451 Sensitive lineage2.2.2 None
SRR7443743 Sensitive lineage4.9 None
SRR22137387 Sensitive lineage3.1.2 None
SRR2101617 Sensitive lineage4.1.1.1 None
SRR6982106 Sensitive lineage4.8 None
SRR6982349 Sensitive lineage2.2.1 None
SRR7443769 Sensitive lineage4 None
SRR7443731 Sensitive lineage4.9 None
SRR7444084 Sensitive lineage4.9 None
SRR7443768 Sensitive lineage4.9 None
SRR1173848 Pre-XDR-TB lineage2.2.2 None
ERR245716 Sensitive lineage2.2.1 None
SRR28351323 Pre-XDR-TB lineage3.1.2 None
SRR6982196 Sensitive None
SRR6982099 Sensitive lineage4.3.4.2.1 None
ERR502483 Sensitive lineage4.9 None
SRR6982075 Sensitive lineage4.9 None
ERR502489 Sensitive lineage4.9 None
SRR7443740 Sensitive lineage4.9 None
ERR502493 Sensitive lineage4.9 None
ERR502492 Sensitive lineage4.9 None
SRR1792247 Other La1.7.1 None
SRR7504782 Sensitive lineage4.9 None
SRR7443741 Sensitive lineage4.9 None
SRR6981922 Sensitive lineage4.3.2.1 None
ERR6052085 Pre-XDR-TB lineage2.2.2 None
SRR1181136 Sensitive lineage2.2.1 None
SRR7443757 Sensitive lineage4.9 None
ERR502490 Sensitive lineage4.9 None
ERR736805 Sensitive lineage2.2.1 None
SRR7504783 Sensitive lineage4.9 None
ERR779662 Sensitive lineage3.1.1 None
SRR7443767 Sensitive lineage4.9 None
SRR5341430 Other lineage3 None
SRR6982471 Sensitive lineage2.2.1 None
ERR108424 Sensitive lineage4.8 None
ERR502472 Sensitive lineage4.6.2.2 None
SRR6981941 Sensitive lineage4.3.4.2.1 None
SRR3725590 Sensitive lineage4.9 None
ERR1873549 Pre-XDR-TB lineage2.2.2 None
ERR2653138 MDR-TB lineage4.1.2.1 None
SRR12199461 Sensitive lineage1.1.3.1 None
SRR7443723 Sensitive lineage4.9 None
ERR1140785 Sensitive lineage1.1.2 None
SRR6982076 Sensitive lineage4.9 None
SRR7444103 Sensitive lineage4.9 None
SRR3105736 Sensitive lineage1.2.2.2 None
SRR5341460 Other lineage3 None
SRR6789621 Other lineage4.9 None
SRR7086711 Other La1.2.BCG None
ERR323068 Sensitive lineage4.9 None
SRR7443736 Sensitive lineage4.9 None
SRR7443790 Sensitive lineage4.9 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6856032 Sensitive lineage2.2.1 None
ERR133816 MDR-TB lineage2.2.1 None
SRR3725593 Sensitive lineage4.9 None
SRR6797374 Sensitive lineage3.1.2 None
ERR037501 Sensitive lineage4.3.4.2.1 None
SRR6982328 Other lineage3.1.1 None
SRR6982037 Sensitive lineage4.1.1.1 None
ERR037234 Sensitive lineage4.9 None
SRR7504775 Sensitive lineage4.9 None
ERR245810 Sensitive lineage4.9.1 None
ERR036233 Sensitive lineage1.1.2;lineage4.3.4.1 None
ERR036242 Sensitive lineage4.3.4.2.1 None
ERR108476 Sensitive lineage4.1.2.1 None
ERR245662 Sensitive lineage1.2.2.1 None
ERR987695 HR-TB lineage4.3.4.2 None
SRR2101774 Sensitive lineage2.2.1 None
SRR7444102 Sensitive lineage4.9 None
SRR6982138 Sensitive lineage4.1.1.3 None
SAMN02350446 Sensitive lineage2.2.1 None
ERR6052110 Pre-XDR-TB lineage2.2.2 None
ERR2514466 Sensitive lineage3 gb
SRR6981962 Sensitive lineage4.3.2.1 None
ERR3324325 MDR-TB lineage4.6.2.2 None
SRR6982011 Sensitive lineage4.1.1.1 None
SRR7504773 Sensitive lineage4.9 None
ERR114476 MDR-TB lineage3.1 None
ERR502486 Sensitive lineage4.9 None
SRR7443732 Sensitive lineage4.9 None
SRR28045379 Sensitive lineage3.1.2 None
SRR28045378 Sensitive lineage3.1.2 None
ERR403364 Sensitive lineage3 None
ERR6397155 HR-TB lineage3 None
SRR6153224 Sensitive lineage3.1.2 ca
SRR7443749 Sensitive lineage4.9 None
SRR11871419 Pre-XDR-TB lineage2.2.1 None
SRR6856119 Sensitive lineage2.2.1 None
SRR7585438 XDR-TB lineage3.1.2 in
ERR266558 Sensitive lineage3 None
SRR7504786 Sensitive lineage4.9 None
SRR6982398 Sensitive lineage2.2.1;lineage4.9 None
SRR7443734 Sensitive lineage4.9 None
SRR9971195 MDR-TB lineage4.3.3 None
ERR245764 HR-TB lineage3.1.1 None
ERR1140774 Sensitive lineage5.1.1 None
SRR1062859 Sensitive lineage2.2.1 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR036191 Sensitive lineage4.9.1 None
ERR1140766 Sensitive lineage1.1.2 None
SRR7443751 Sensitive lineage4.9 None
SRR7443752 Sensitive lineage4.9 None
ERR245846 Sensitive lineage2.2.1 None
ERR245795 Sensitive lineage3.1.1;lineage4.3.2.1 None
SRR6982414 Sensitive lineage4.9 None
SRR7443726 Sensitive lineage4.9 None
ERR502484 Sensitive lineage4.9 None
SRR124453 HR-TB lineage2.2.2 None
ERR6397183 Sensitive lineage3 None
SRR7443737 Sensitive lineage4.9 None
SRR1181319 Sensitive lineage2.2.1 None
SRR3725589 Sensitive lineage4.9 None
ERR11067192 Sensitive lineage3.1.2 None
ERR502485 Sensitive lineage4.9 None
SRR2101681 Sensitive lineage4.8 None
SRR1011488 Sensitive lineage2.2.1 None
SRR6982035 Sensitive lineage4.3.2.1;lineage4.9 None
SRR7504779 Sensitive lineage4.9 None
SRR7443730 Sensitive lineage4.9 None
ERR234111 MDR-TB lineage3.1 np
SAMN02585942 Sensitive lineage4.1.2 None
SRR7443735 Sensitive lineage4.9 None
SRR7443739 Sensitive lineage4.9 None
SRR6982104 Sensitive lineage2.2.1 None
SRR7444098 Sensitive lineage4.9 None
ERR245740 Sensitive lineage4.1.2 None
SRR7504776 Sensitive lineage4.9 None
SRR6044925 Sensitive lineage4.9 None
ERR144568 Sensitive None
SRR7444071 Sensitive lineage4.9 None
SRR6982213 Sensitive lineage4.3.2.1 None
SRR6982385 Sensitive lineage4.1.2 None
SRR7444074 Sensitive lineage4.9 None
SRR3725588 Sensitive lineage4.9 None
SRR6982078 Sensitive lineage4.9 None
ERR2660499 Sensitive lineage4.1.1.3 None
SRR3725596 Sensitive lineage4.9 None
SRR7443725 Sensitive lineage4.9 None
SRR7444072 Sensitive lineage4.9 None
SRR6982465 Sensitive lineage4.3.4.2 None
ERR926168 Sensitive lineage4.9 None
SRR6982558 Sensitive lineage4.3.4.2.1 None
SRR7443733 Sensitive lineage4.9 None
SRR2100324 MDR-TB lineage3.1 None
SRR4034393 MDR-TB lineage4.1.2.1 None
SRR3725591 Sensitive lineage4.9 None
SRR2101312 MDR-TB lineage2.2.1 None
ERR2510544 MDR-TB lineage3.1.2 pk
ERR6397161 Other lineage4.2.2.2 None