EBG00000313325 - n.257G>A


Drug resistance types
87 Sensitive 36 RR-TB 20 HR-TB 49 MDR-TB 24 Pre-XDR-TB 1 XDR-TB 182 Other
lineage Counts
lineage Count
lineage3 7
lineage4.9 137
La1.7;lineage4.9 1
lineage2.2.1 51
lineage4.3.4.2.1 12
La1.8.1 5
lineage4.3.4.2 3
lineage4.4.2 4
lineage4.4.1.2 2
lineage4.1.2.1 12
lineage4.3.3 11
lineage4.8 19
lineage5 1
lineage4.7 5
lineage4.4.1.1 2
lineage2.2.1.1 6
lineage4.6.1.2 1
lineage4.6.1.1 3
La1.8.2 3
lineage4.1.1.3 8
lineage4.2.1.1 1
lineage4.4.1.1;lineage4.6.1.2 3
lineage4.3.4.1 4
lineage4.3.3;lineage4.8 4
La1.4 1
lineage4.1.1.1 3
lineage4.2.1 6
lineage2.2.1;lineage4.9 1
lineage4 3
lineage2.2.2 8
lineage1.2.1.2.1 1
lineage4.4 1
lineage4.1.2 7
lineage1.2.2 1
La1.7;lineage3.1;lineage4 1
lineage4.2.2.2 4
La1.2 4
lineage4.3.4.1;lineage4.9 2
lineage4.1.2.1;lineage4.9 1
lineage4.3;lineage4.9 2
lineage3;lineage4 1
lineage2.2.2;lineage4 2
lineage1.1.2;lineage4.3.4.1 1
lineage4.1.2.1;lineage4.4.1.1 1
lineage3.1.2.2 1
lineage3.1.1 4
lineage4.9.1 1
lineage4.4.1.1.1 2
lineage4.3.2.1 4
lineage1.1.3.3 1
lineage4.1.2.1;lineage4.4.1 1
lineage1.2.1.1 1
lineage4.1.4 1
lineage4.2.2.1 1
lineage4.1.3 2
lineage4.1.1.2 1
lineage1.2.2.1 3
lineage1.2.2.2 1
lineage4.2.2 1
lineage2.2.1;lineage4.5 1
La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.5 2
lineage4.3 1
lineage4.1.1 1
lineage4.1;lineage4.9 1
lineage3.1.1;lineage4 1
lineage1.1.1.1 1
lineage4.8.1 1
La1.6 1
lineage4.3.2 1
lineage4.6.5 1
La1.3 1
lineage4.6.2.2 1
La1.8.1;lineage4.9 1
lineage2.2;lineage4 1
lineage3.1.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 399
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR11342646 HR-TB lineage3 None
SRR13861725 Other lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR18002967 HR-TB lineage2.2.1 None
ERR779680 Sensitive lineage4.3.4.2.1 None
SRR13861219 Other lineage4.9 None
ERR3468488 Other La1.8.1 None
ERR3797024 Sensitive lineage4.9 None
ERR7801314 Sensitive lineage4.3.4.2 None
ERR4811101 Other lineage4.4.2 None
ERR126597 HR-TB lineage4.4.1.2 None
SRR18003023 Other lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
ERR10796553 Other lineage4.9 None
SRR3675389 Other lineage4.9 None
SRR18003032 Other lineage2.2.1 None
SRR13628039 Sensitive lineage4.9 None
ERR4819383 RR-TB lineage4.9 None
ERR502470 RR-TB lineage4.9 None
ERR502497 Sensitive lineage4.9 None
SRR7131216 Other lineage4.1.2.1 None
ERR9992879 XDR-TB lineage4.3.3 None
ERR2228859 Other lineage4.8 None
SRR13861556 Other lineage4.9 None
ERR2510804 Other lineage2.2.1 None
SRR13861343 Other lineage4.9 None
SRR6044925 Sensitive lineage4.9 None
SRR11349207 RR-TB lineage2.2.1 None
ERR439982 Sensitive lineage5 None
SRR13861303 Other lineage4.9 None
SRR10315558 RR-TB lineage2.2.1 None
SRR13861449 Other lineage4.9 None
SRR7755657 Other lineage4.8 None
ERR4829359 Sensitive lineage4.7 None
ERR4821172 RR-TB lineage4.9 None
SRR17567917 RR-TB lineage4.4.1.1 None
ERR2229033 Other lineage4.8 None
SRR1011489 Sensitive lineage2.2.1.1 None
ERR773806 Sensitive lineage2.2.1 None
ERR4816310 HR-TB lineage4.6.1.2 None
SAMN02567676 MDR-TB lineage4.6.1.1 None
SRR12062493 Pre-XDR-TB lineage4.4.2 None
ERR502490 Sensitive lineage4.9 None
ERR6149874 Other La1.8.2 None
ERR176820 Sensitive lineage4.3.4.2.1 mw
ERR3324373 MDR-TB lineage2.2.1 None
ERR4188021 Other La1.8.1 None
SRR7131123 Other lineage4.8 None
SRR7755655 Other lineage4.1.2.1 None
SRR13861562 Other lineage4.9 None
SRR6982239 Sensitive lineage4.1.1.3 None
SRR6152854 Other lineage4.1.2.1 None
SRR6397640 Other lineage4.2.1.1 None
SRR13861533 Other lineage4.9 None
SRR1049564 HR-TB lineage4.4.1.1;lineage4.6.1.2 None
ERR3797015 HR-TB lineage4.9 None
ERR3275996 HR-TB lineage4.3.4.1 nl
SRR10869071 MDR-TB lineage2.2.1 None
ERR4816031 Other lineage4.3.3 gb
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
SRR16278292 Other La1.4 None
ERR10796620 Other lineage4.1.1.1 None
ERR10796634 Other lineage4.7 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
ERR161125 Sensitive lineage4 None
SRR14801688 Sensitive lineage4.3.3 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR6397396 HR-TB lineage1.2.1.2.1 None
SRR5818647 Other lineage4.3.4.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR16627752 RR-TB lineage4.4 None
ERR1873549 Pre-XDR-TB lineage2.2.2 None
ERR1063855 Other lineage4.9 None
SRR1180237 Sensitive lineage4.1.2 None
ERR9786164 RR-TB lineage4.1.1.3 None
SRR13861147 Other lineage4.9 None
ERR4769525 Sensitive lineage4.9 None
SRR13861415 Other lineage4.9 None
SRR18002963 Other lineage2.2.1 None
SRR13861720 Other lineage4.9 None
ERR736822 Sensitive lineage4.4.1.2 None
ERR4818126 Other lineage1.2.2 None
SRR13861231 Other lineage4.9 None
SRR7645972 MDR-TB lineage4.2.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR1062920 MDR-TB lineage4.3.3;lineage4.8 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR19304104 Other lineage4.8 None
SAMN02380985 Sensitive lineage4.2.2.2 None
SRR13861157 Other lineage4.9 None
ERR5917985 MDR-TB lineage2.2.1 None
SRR16156188 Sensitive lineage4.9 None
SRR6982514 Sensitive lineage4.3.3 None
SRR1049031 Sensitive lineage4.9 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
ERR4769478 Other La1.2 None
SRR6982141 Other lineage4.3.3 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR181749 Sensitive lineage4.3.4.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR1140691 HR-TB lineage4.4.1.1;lineage4.6.1.2 None
ERR10796592 Other lineage4.9 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
SRR1173361 MDR-TB lineage4.6.1.1 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
ERR502478 RR-TB lineage4.9 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR13861567 Other lineage4.9 None
SRR18002981 Other lineage2.2.1 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
ERR867570 RR-TB lineage4.9 None
SRR1173113 Other lineage4.3;lineage4.9 None
SRR13861555 Other lineage4.9 None
ERR133816 MDR-TB lineage2.2.1 None
SRR7070176 Other lineage3 None
SRR1181085 Sensitive lineage4.1.2 None
SAMN02585982 MDR-TB lineage4.3.3 None
SRR1173740 Other lineage3;lineage4 None
ERR5311077 Other La1.8.1 None
ERR867541 MDR-TB lineage4.2.1 None
SRR13861406 Other lineage4.9 None
ERR10762495 MDR-TB lineage2.2.1 None
ERR4829333 Other lineage4 None
ERR6140667 Other La1.8.2 None
SRR1062860 Sensitive lineage2.2.1.1 None
SRR11342698 RR-TB lineage4.4.1.1 None
ERR502474 RR-TB lineage4.9 None
SRR1013637 Sensitive lineage2.2.2;lineage4 None
ERR10796560 Other lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
SRR13861191 Other lineage4.9 None
ERR036233 Sensitive lineage1.1.2;lineage4.3.4.1 None
ERR6201843 Other La1.2 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
ERR4813263 MDR-TB lineage4.8 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR1173281 Other lineage3 None
SRR1173170 Other lineage4.9 None
SRR1049568 Sensitive lineage4.2.2.2 None
ERR4188395 Sensitive La1.8.1 None
SRR1173719 Other lineage4.9 None
SRR1013636 Sensitive lineage2.2.2;lineage4 None
ERR867538 Other lineage4.2.2.2 None
ERR10796636 Other lineage4.1.2.1 None
ERR072033 Sensitive lineage3.1.2.2 None
ERR4769512 Sensitive lineage4.9 None
SRR7131145 Other lineage4.1.2.1 None
SRR12634609 MDR-TB lineage3.1.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR13861278 Other lineage4.9 None
SRR13423546 Other lineage4.4.2 None
SRR19303820 RR-TB lineage4.8 None
SRR13861630 Other lineage4.9 None
SRR1184329 Other lineage4.9 None
SRR12062533 Pre-XDR-TB lineage2.2.1.1 None
SRR13861653 Other lineage4.9 None
SRR18002980 Other lineage2.2.1 None
ERR3283040 HR-TB lineage4.9 None
SRR13861421 Other lineage4.9 None
ERR037504 Other lineage4.9.1 None
ERR6198389 Other La1.2 None
SRR13861702 Other lineage4.9 None
SRR13861286 Other lineage4.9 None
ERR502486 Sensitive lineage4.9 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR3725597 Sensitive lineage4.9 None
ERR1873437 HR-TB lineage2.2.2 None
SRR1182994 Sensitive lineage4.1.2 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR6982106 Sensitive lineage4.8 None
ERR4819863 RR-TB lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR19303899 Other lineage3 None
SAMN02350456 Sensitive lineage4.3.2.1 None
SRR13861387 Other lineage4.9 None
ERR4798769 Other lineage1.1.3.3 None
SRR13861428 Other lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR502483 Sensitive lineage4.9 None
ERR502493 Sensitive lineage4.9 None
ERR4819175 Other lineage4.1.1.3 gb
ERR4808964 RR-TB lineage2.2.1 None
SRR13861586 Other lineage4.9 None
SRR18002964 Other lineage2.2.1 None
SRR13861201 Other lineage4.9 None
SRR1140574 MDR-TB lineage4.3.3;lineage4.8 None
SRR6982385 Sensitive lineage4.1.2 None
SRR13861369 Other lineage4.9 None
ERR6052085 Pre-XDR-TB lineage2.2.2 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR10869203 Pre-XDR-TB lineage4.1.1.3 None
SRR7070134 Other lineage3.1.1 None
SRR13861312 Other lineage4.9 None
SRR7645971 Other lineage2.2.1 None
SRR1173717 MDR-TB lineage4.6.1.1 None
SRR13861459 HR-TB lineage4.9 None
SRR13861180 Other lineage4.9 None
SRR3725588 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR3324351 HR-TB lineage4.1.4 None
SRR13861244 Other lineage4.9 None
SRR13861454 Other lineage4.9 None
ERR369151 Other lineage4.9 None
SRR16156697 RR-TB lineage2.2.1 None
SRR3675265 Other lineage4 None
SRR18002974 Other lineage2.2.1 None
SRR1019130 Sensitive lineage4.3.2.1 None
ERR1034638 Pre-XDR-TB lineage2.2.1 None
SRR7131147 Other lineage4.1.2.1 None
SRR11342669 Other lineage4.8 None
ERR10796581 Other lineage4.1.2 None
SRR1062873 HR-TB lineage4.4.1.1;lineage4.6.1.2 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR6397575 Other lineage4.3.4.2.1 None
SRR13861403 Other lineage4.9 None
ERR190388 Sensitive lineage4.9 None
SRR18003047 MDR-TB lineage2.2.1 None
ERR4817047 Sensitive lineage4.2.2.1 gb
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR11342671 RR-TB lineage4.1.3 None
SRR13861379 Other lineage4.9 None
ERR8975044 Other lineage4.1.1.2 None
ERR176771 Sensitive lineage4.3.4.2.1 None
SRR1049030 Sensitive lineage4.9 None
SRR6045002 RR-TB lineage4.9 None
SRR13861331 Other lineage4.9 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR4831863 HR-TB lineage2.2.1.1 None
SRR1062863 Sensitive lineage1.2.2.1 None
ERR4818065 Other lineage4.1.2.1 None
SRR3105736 Sensitive lineage1.2.2.2 None
ERR10796568 Other lineage4.9 None
SRR18002994 MDR-TB lineage4.2.2 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR4769470 Sensitive lineage4.9 None
SRR7069835 Other lineage2.2.1 None
ERR10796591 Other lineage4.9 None
SRR7645928 Other lineage4.7 None
ERR4816198 Sensitive lineage4.1.3 None
ERR502473 RR-TB lineage4.9 None
SRR6397770 Other lineage4.7 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1175474 Other lineage4.9 None
ERR4820030 Other lineage4.9 None
ERR10796596 Other lineage4.9 None
ERR4815079 RR-TB lineage3 None
ERR10796617 Other lineage4.3.4.1 None
SRR5065527 Other lineage2.2.1 None
SRR7131121 Other lineage4.3.3 None
ERR4817826 Other lineage4.5 None
SRR7131149 Pre-XDR-TB lineage4.8 None
ERR502484 Sensitive lineage4.9 None
SRR3725599 Sensitive lineage4.9 None
SAMN02350447 Sensitive lineage2.2.1.1 None
SRR11342640 MDR-TB lineage4.3.3 None
ERR10796577 Other lineage4.9 None
SRR13861491 Other lineage4.9 None
SRR19303907 Other lineage4.8 None
ERR4817555 Sensitive lineage3 None
ERR502498 Sensitive lineage4.9 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
ERR3797062 RR-TB lineage4.9 None
SRR1140927 Sensitive lineage4.3.2.1 None
SRR1238557 Other lineage4.9 None
SRR1181242 Sensitive lineage4.1.2 None
ERR10796597 Other lineage4.3.3 None
ERR10796589 Other lineage4.9 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
ERR4820484 Sensitive lineage4.8 None
SAMN02350446 Sensitive lineage2.2.1 None
ERR6052110 Pre-XDR-TB lineage2.2.2 None
SRR13861411 Other lineage4.9 None
SRR13861143 RR-TB lineage4.9 None
ERR4820075 Other lineage4.1.2.1 None
ERR3797074 Sensitive lineage4.9 None
ERR10796598 Other lineage4.9 None
SAMN02350450 Sensitive lineage1.2.2.1 None
SRR1049569 Sensitive lineage4.2.2.2 None
SRR7131195 Other lineage2.2.1 None
SRR6152979 Other lineage4.7 None
ERR369156 Sensitive lineage4.9 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR13861268 Other lineage4.9 None
ERR502485 Sensitive lineage4.9 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR6397441 Other lineage4.5 None
SRR18003045 Other lineage2.2.1 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
SRR2101681 Sensitive lineage4.8 None
SRR1173185 Other lineage4.9 None
ERR10796593 Other lineage4.3 None
SRR1011488 Sensitive lineage2.2.1 None
ERR1144989 Sensitive lineage4.8 None
ERR1023509 MDR-TB lineage4.9 None
ERR4817915 Other lineage4.9 None
SRR1173770 Other lineage4.9 None
ERR323048 Sensitive lineage4.9 None
SRR6982053 Sensitive lineage4.3.4.1;lineage4.9 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR13861179 Other lineage4.9 None
SRR6982014 Sensitive lineage4.1.1 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
SRR1196478 Other lineage4.9 None
SRR6045621 Other lineage4.1.1.3 None
ERR5987263 MDR-TB lineage2.2.1 None
SRR13861150 Other lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR3283006 RR-TB lineage4.9 None
ERR1034647 MDR-TB lineage4.1.1.3 None
SRR9971168 Other lineage4.3.2.1 None
SRR1792011 Other La1.8.1 None
SAMN02585942 Sensitive lineage4.1.2 None
ERR10796566 Other lineage4.9 None
ERR10796629 Other lineage4.1;lineage4.9 None
SRR6046275 Other lineage3.1.1;lineage4 None
ERR867569 Other lineage4.9 None
SRR6397771 Other lineage1.1.1.1 None
ERR4819910 Sensitive lineage4.9 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
ERR502489 Sensitive lineage4.9 None
SRR13861440 Other lineage4.9 None
SRR1011492 Sensitive lineage1.2.2.1 None
ERR502492 Sensitive lineage4.9 None
SRR13861566 Other lineage4.9 None
ERR181864 Sensitive lineage3.1.1 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR13861522 Other lineage4.9 None
SRR13861232 Other lineage4.9 None
SRR10993951 RR-TB La1.6 None
SRR13861324 Other lineage4.9 None
ERR10796635 Other lineage4.8 None
SRR13861457 Other lineage4.9 None
SRR11342673 RR-TB lineage4.3.4.2 None
SRR13861345 Other lineage4.9 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR13861597 Other lineage4.9 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
ERR6149870 Other La1.8.2 None
SRR18003046 MDR-TB lineage2.2.1 None
ERR502481 RR-TB lineage4.9 None
SRR13861497 HR-TB lineage4.9 None
SRR13861373 Other lineage4.9 None
SRR305201 Sensitive lineage4.9 None
SRR13861447 Other lineage4.9 None
SRR6855917 Sensitive lineage4.8 None
SRR13861627 Other lineage4.9 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
ERR10796628 Other lineage4.3.3 None
ERR5162090 RR-TB lineage4.9 None
SRR13861718 Other lineage4.9 None
SRR15316595 RR-TB lineage4.4.2 None
SRR13861438 Other lineage4.9 None
ERR6866241 Other lineage4.3.2 None
ERR10796626 Other lineage4.1.2.1 None
ERR6201832 Other La1.2 None
ERR10796599 Other lineage4.8 None
SRR13861608 Other lineage4.9 None
ERR7801176 RR-TB lineage4.6.5 None
ERR4829208 Other lineage4.8 None
SRR13861141 Other lineage4.9 None
SRR12882768 RR-TB lineage3.1.1 None
SRR13861142 Other lineage4.9 None
ERR4769479 Other La1.3 None
ERR502472 Sensitive lineage4.6.2.2 None
SRR1791899 Sensitive La1.8.1;lineage4.9 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR13861514 Other lineage4.9 None
ERR2513405 Other lineage2.2.1 None
ERR10796571 Other lineage4.9 None
SRR11342691 MDR-TB lineage2.2.1 None
SRR1062859 Sensitive lineage2.2.1 None
ERR4769549 Sensitive lineage4.9 None
ERR10796640 Other lineage4.1.2.1 None
ERR970449 RR-TB lineage4.1.1.3 None
SRR1140736 Other lineage4.1.2.1 None
ERR161184 Sensitive lineage4.3.4.2.1 None
SRR6982076 Sensitive lineage4.9 None
ERR036207 Other lineage4.3;lineage4.9 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR13861144 Other lineage4.9 None
SRR18002887 MDR-TB lineage2.2.1.1 None
ERR3283032 Other lineage4.9 None
SRR3675582 Other lineage4.9 None
SRR7645906 Other lineage2.2.1 None
SRR7645899 Other lineage2.2.1 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None