EBG00000313339 - n.2090A>G
Drug resistance types
67 Sensitive
29 RR-TB
21 HR-TB
21 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
52 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 23 |
| lineage4.4.1.1 | 3 |
| lineage4.9 | 32 |
| 9 | |
| lineage4.1.2.1 | 6 |
| La1.7.1 | 3 |
| lineage1.2.2.1 | 2 |
| lineage4.4.2 | 2 |
| lineage3 | 11 |
| lineage4.5 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4 | 9 |
| lineage4.8 | 20 |
| lineage4.3.4.2.1 | 5 |
| lineage4.6.1.1 | 1 |
| lineage4.1.1 | 3 |
| lineage3.1.1 | 5 |
| lineage1.1.3 | 1 |
| lineage4.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.1.1.3 | 6 |
| lineage6 | 1 |
| lineage4.3.3 | 2 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.8.2 | 1 |
| lineage4.1.2 | 6 |
| lineage1.1.3.1 | 2 |
| lineage4.2.2.2 | 1 |
| lineage2.2.2 | 4 |
| lineage4.4.1.2 | 3 |
| lineage2.2 | 2 |
| lineage2.2.1.1 | 5 |
| lineage4.3.4.1 | 1 |
| La1.8.1 | 6 |
| lineage4.2.1 | 3 |
| La1.7.X-unk4 | 1 |
| lineage6.2.2 | 2 |
| La1 | 1 |
| lineage4.9;La1.3 | 1 |
| La1.3 | 3 |
| lineage1.1.2 | 1 |
| lineage4.6.5 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage4.9;lineage4.4.2 | 1 |
| lineage2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 202 |
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR21658571 | Sensitive | lineage4.1.2.1 | None | SRR1792232 | Other | La1.7.1 | None | SRR1792247 | Other | La1.7.1 | None | SRR18572455 | Sensitive | lineage4.9 | None | SRR2101506 | Sensitive | lineage1.2.2.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR22175227 | Pre-XDR-TB | lineage3 | None | SRR21737226 | Sensitive | lineage4.5 | None | ERR4814776 | Sensitive | lineage3 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR22424765 | MDR-TB | lineage4 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR1198988 | Sensitive | lineage4.6.1.1 | None | ERR1815538 | Other | La1.7.1 | None | ERR176450 | Sensitive | lineage4.1.1 | None | ERR4815079 | RR-TB | lineage3 | None | SRR3675273 | Sensitive | lineage3 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR2228965 | Other | lineage4.8 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR4816093 | Other | lineage1.1.3 | None | ERR2229557 | HR-TB | lineage4.8 | None | ERR2229436 | Other | lineage4.8 | None | ERR4816184 | Other | lineage4.1.2.1 | None | ERR2229147 | Other | lineage4.8 | None | ERR2229435 | HR-TB | lineage4.8 | None | ERR2229148 | Other | lineage4.8 | dk | SRR4033203 | Sensitive | lineage4.9 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR2179737 | HR-TB | lineage4.2 | None | ERR2228890 | Other | lineage4 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR4817840 | Other | lineage3.1.2.2 | gb | ERR2228910 | Other | lineage4.8 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR2513430 | Other | lineage4.1.2.1 | gb | ERR2513382 | RR-TB | lineage4.1.1.3 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR4818787 | MDR-TB | lineage6 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR2512423 | Other | lineage4.1.1.3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | ERR4818370 | Other | lineage4.1.1 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR4819125 | Other | lineage2.2.1 | gb | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR5341460 | Other | lineage3 | None | SRR5341430 | Other | lineage3 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR2514137 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820342 | Sensitive | lineage4.9 | None | ERR1023509 | Other | None | ERR4820484 | Other | lineage4.8 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR2660490 | Sensitive | lineage4.3.2.1 | None | ERR2515093 | Other | lineage4.8.2 | gb | ERR4821811 | RR-TB | lineage4.9 | None | ERR4821057 | HR-TB | lineage4 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4821143 | RR-TB | lineage4.9 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR2660441 | Sensitive | lineage1.1.3.1 | None | ERR4821550 | Other | lineage2.2.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR6982115 | Sensitive | lineage4 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR6152899 | MDR-TB | lineage2.2.2 | ca | SRR6397733 | Other | lineage4.4.1.2 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | SRR6045263 | Sensitive | lineage4.9 | None | ERR4828879 | MDR-TB | lineage3 | None | SRR6257024 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831722 | HR-TB | lineage2.2.1 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6982246 | Sensitive | lineage4 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR6981912 | Sensitive | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6982070 | RR-TB | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR9940974 | Other | lineage4.9 | None | SRR6982530 | Other | lineage1.2.2.1 | None | SRR7131091 | Sensitive | lineage4.1.2 | None | DRR184903 | Sensitive | lineage2.2.2 | None | SRR8600288 | Other | La1.8.1 | None | ERR323068 | Sensitive | lineage4.9 | None | SRR8600069 | Other | La1.8.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR323061 | Sensitive | lineage4.9 | None | DRR034348 | Other | lineage2.2.1 | None | ERR144568 | Pre-XDR-TB | None | ERR017781 | Other | lineage3 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1063855 | Other | lineage4 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | ERR037501 | Sensitive | lineage4.3.4.2.1 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR3324329 | HR-TB | lineage4.1.1.3 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283041 | Other | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR3439277 | Sensitive | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3470682 | Other | lineage3 | None | ERR3804140 | Sensitive | lineage6.2.2 | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR4188202 | Other | La1.8.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4627369 | Other | La1.8.1 | None | ERR473279 | Other | lineage4.9 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4769470 | Sensitive | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4769482 | Sensitive | La1 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4772207 | Other | La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769517 | Other | La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR5866556 | MDR-TB | lineage2.2.1 | None | ERR4797974 | Other | lineage1.1.2 | in | ERR4811101 | Other | lineage4.4.2 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR9285816 | Sensitive | lineage4.3.3 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR7821140 | Sensitive | lineage2.2.1.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR1011488 | Other | lineage2.2.1 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | ERR9787142 | Sensitive | lineage6.2.2 | None | SRR10272569 | Sensitive | lineage4.4.1.1 | None | SRR1173719 | HR-TB | lineage3 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR10482948 | Other | La1.8.1 | None | SRR1172065 | Pre-XDR-TB | lineage3 | None | SRR1173310 | MDR-TB | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1181136 | Sensitive | lineage2.2 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR11972212 | MDR-TB | lineage2.2.1.1 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR124451 | HR-TB | None | SRR12199465 | Sensitive | lineage2.2.1.1 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR124453 | HR-TB | None | SRR124452 | HR-TB | lineage2 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None |
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