EBG00000313339 - n.2090A>G
Drug resistance types
33 Sensitive
36 RR-TB
7 HR-TB
12 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 10 |
| lineage4.8 | 44 |
| La1.7.1 | 3 |
| lineage4.1.1.3 | 6 |
| lineage4.3.2 | 1 |
| lineage2.2.2 | 6 |
| lineage4.6.5 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.2.1 | 4 |
| lineage4.9 | 20 |
| lineage4.4.2 | 2 |
| La1.7.X-unk4 | 1 |
| lineage2;lineage4 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage4.3.4.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage6.2.2 | 2 |
| lineage4.5 | 1 |
| lineage3.1.1 | 5 |
| lineage4.1.2 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.6.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage3 | 2 |
| lineage4 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage2.2.2;lineage4.9 | 1 |
| lineage1.1.3.2 | 1 |
| La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 134 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10315558 | RR-TB | lineage2.2.1 | None | ERR978755 | RR-TB | lineage4.8 | None | SRR1792247 | Other | La1.7.1 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | SRR6982115 | Sensitive | lineage4.3.2 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | DRR184903 | Sensitive | lineage2.2.2 | None | ERR978747 | Other | lineage4.8 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR978726 | RR-TB | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR983238 | MDR-TB | lineage2.2.1.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | ERR1815538 | Other | La1.7.1 | None | ERR978748 | Other | lineage4.8 | None | SRR6789621 | Other | lineage4.9 | None | ERR4821811 | Sensitive | lineage4.9 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR978693 | Other | lineage4.8 | None | ERR978751 | Other | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR4769516 | Sensitive | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR911929 | Other | lineage4.8 | None | ERR978734 | RR-TB | lineage4.8 | None | ERR978750 | RR-TB | lineage4.8 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR124451 | Sensitive | lineage2.2.2 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | ERR978754 | RR-TB | lineage4.8 | None | ERR978761 | Other | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR22424765 | HR-TB | lineage4.8 | None | ERR1198988 | Sensitive | lineage4.6.1.1 | None | SRR6982246 | RR-TB | lineage4.1.2;lineage4.9 | None | ERR2229436 | Other | lineage4.8 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SRR3725591 | Sensitive | lineage4.9 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR978735 | Other | lineage4.8 | None | ERR978762 | Other | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | ERR978727 | Other | lineage4.8 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR911930 | Other | lineage4.8 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR11465490 | Sensitive | lineage4.1.2.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR3804140 | Sensitive | lineage6.2.2 | None | SRR1184308 | RR-TB | lineage4.9 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR978746 | RR-TB | lineage4.8 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | ERR978760 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR1792232 | Other | La1.7.1 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | ERR978694 | Other | lineage4.8 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | ERR9285816 | Sensitive | lineage4.3.3 | None | ERR978756 | Other | lineage4.8 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR3725588 | Sensitive | lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR3470682 | Other | lineage3 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR3283044 | Other | lineage4 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR245764 | HR-TB | lineage3.1.1 | None | SRR3725590 | Sensitive | lineage4.9 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR1873549 | Pre-XDR-TB | lineage2.2.2 | None | ERR1063855 | Other | lineage4.9 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR5341460 | Other | lineage3 | None | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | ERR2179737 | HR-TB | lineage4.2.1 | None | ERR3283032 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | ERR037501 | Sensitive | lineage4.3.4.2.1 | None | SRR124452 | Sensitive | lineage2.2.2;lineage4.9 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR124453 | HR-TB | lineage2.2.2 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR2228910 | Other | lineage4.8 | None | SRR7240350 | Other | La1.8.1 | None | SRR1173719 | Other | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR2228900 | Other | lineage4.8 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR4769512 | Sensitive | lineage4.9 | None | SRR6982138 | Sensitive | lineage4.1.1.3 | None | ERR978752 | Other | lineage4.8 | None | ERR4820484 | Sensitive | lineage4.8 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR9787142 | Sensitive | lineage6.2.2 | None | ERR2229147 | Other | lineage4.8 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | ERR1023509 | MDR-TB | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR3725597 | Sensitive | lineage4.9 | None | ERR323048 | Sensitive | lineage4.9 | None | DRR034348 | Other | lineage2.2.1 | None |
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