EBG00000313325 - n.860G>A
Drug resistance types
99 Sensitive
1 RR-TB
13 HR-TB
18 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
59 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 5 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1 | 10 |
| lineage6.1.1 | 2 |
| lineage4.3.4.2 | 3 |
| lineage3 | 4 |
| lineage2.2.1 | 21 |
| lineage4.8 | 1 |
| lineage4.1.1.3 | 4 |
| La1.6 | 2 |
| La1.8.1 | 24 |
| lineage4.1.2 | 7 |
| lineage1.2.1.2.1 | 1 |
| lineage2.2.1.1 | 7 |
| lineage1.1.2 | 3 |
| lineage4.9;lineage1.1 | 1 |
| lineage1.1.3 | 1 |
| lineage4.9;lineage4.4.2 | 1 |
| lineage1.1.3.1 | 3 |
| 6 | |
| lineage2 | 1 |
| lineage4.3.4.1 | 4 |
| La1.7.1 | 4 |
| lineage4.4.2 | 2 |
| La1.4 | 2 |
| lineage3.1.1 | 3 |
| lineage4.5 | 2 |
| lineage4.3.4 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage4.6.1.1 | 1 |
| lineage4.9 | 17 |
| lineage1.1.3.2 | 4 |
| lineage4.1.1 | 4 |
| lineage1.2.2.2 | 2 |
| lineage4.9.1 | 1 |
| lineage4 | 3 |
| lineage4.3.2.1;lineage3.1.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.3.2.1 | 4 |
| lineage4.3.2.1;lineage2.2.1 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4.6 | 2 |
| lineage5.1.1 | 2 |
| lineage5.1.4 | 1 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage6.2.2 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.3.4.1;lineage1.1.2 | 1 |
| lineage4.6.2.2 | 2 |
| La1.8 | 1 |
| La1.3 | 5 |
| La1 | 1 |
| La1.2 | 3 |
| lineage2.2.1.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 200 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9285816 | Sensitive | lineage4.3.3 | None | ERR9786274 | Sensitive | lineage4.3.2 | None | ERR9786447 | Sensitive | lineage4.1.2.1 | None | ERR9787323 | Sensitive | lineage6.1.1 | None | ERR9786558 | Sensitive | lineage4.3.4.2 | None | ERR9787164 | Sensitive | lineage6.1.1 | None | ERR9786538 | Sensitive | lineage4.3.4.2 | None | ERR987719 | HR-TB | lineage3 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1011488 | Other | lineage2.2.1 | None | SRR10869203 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10869143 | Pre-XDR-TB | lineage2.2.1 | None | SRR1162841 | MDR-TB | lineage4.3.3 | None | SRR10993953 | Other | La1.6 | None | SRR11294512 | Other | La1.8.1 | None | SRR10993957 | Other | La1.6 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR11972221 | HR-TB | lineage2.2.1 | None | SRR11972264 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11972283 | MDR-TB | lineage2.2.1 | None | SRR11972378 | MDR-TB | lineage1.1.2 | None | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11972390 | MDR-TB | lineage2.2.1 | None | SRR12199400 | HR-TB | lineage4.9;lineage1.1 | None | SRR12199410 | Sensitive | lineage1.1.3 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR124453 | HR-TB | None | SRR124452 | HR-TB | lineage2 | None | SRR12199465 | Sensitive | lineage2.2.1.1 | None | SRR124451 | HR-TB | None | SRR12882699 | Sensitive | lineage1.1.2 | None | SRR14782760 | Sensitive | lineage4.3.4.1 | None | SRR13199739 | Other | La1.7.1 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | SRR13199738 | Other | La1.7.1 | None | SRR14782537 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801294 | MDR-TB | lineage2.2.1 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR1573728 | Sensitive | lineage4.4.2 | None | SRR16278273 | Other | La1.4 | None | SRR16278292 | Other | La1.4 | None | SRR1792232 | Other | La1.7.1 | None | SRR17832798 | Other | lineage3 | None | SRR1792247 | Other | La1.7.1 | None | SRR19428614 | HR-TB | lineage3.1.1 | None | SRR1792304 | Other | La1.8.1 | None | SRR1792392 | Other | La1.8.1 | None | SRR21239778 | Sensitive | lineage4.3.3 | None | SRR2101767 | HR-TB | lineage4.1.2.1 | None | SRR21240239 | Sensitive | lineage4.1.2.1 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | ERR176771 | Sensitive | None | SRR21675848 | Other | lineage1.1.3.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | ERR190332 | Sensitive | lineage4.3.4.1 | None | ERR161125 | Sensitive | lineage4.3.4 | None | SRR5485445 | Other | None | ERR163970 | Sensitive | lineage4.6.1.2 | None | ERR163988 | Sensitive | lineage4.1.2 | None | ERR181749 | Sensitive | lineage4.3.4.2.1 | None | ERR1750930 | Sensitive | lineage4.1.1.3 | za | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR190388 | Sensitive | lineage4.9 | None | ERR181750 | Sensitive | lineage1.1.3.2 | None | ERR176450 | Sensitive | lineage4.1.1 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | ERR212042 | HR-TB | lineage3.1.1 | None | ERR216986 | Sensitive | lineage4.3.4.2.1 | None | ERR216901 | Other | lineage3.1.1 | None | ERR216928 | Other | lineage4.9.1 | None | ERR216949 | Sensitive | lineage4 | None | ERR216950 | Other | lineage1.1.3.2 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | ERR221608 | Sensitive | lineage1.2.2.2 | None | ERR221583 | Sensitive | lineage4.1.2 | None | ERR2179816 | Sensitive | lineage4 | None | SRR5074094 | HR-TB | lineage2.2.1.1 | None | ERR245795 | Sensitive | lineage4.3.2.1;lineage3.1.1 | None | ERR245809 | Sensitive | lineage4.3.4.1 | None | SRR5153236 | MDR-TB | lineage2.2.1 | None | ERR1873555 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341462 | Pre-XDR-TB | lineage3.1.2.1 | None | SRR5341460 | Other | lineage3 | None | ERR4820273 | Sensitive | lineage4.1.1 | gb | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR5485443 | Other | None | ERR2660441 | Sensitive | lineage1.1.3.1 | None | ERR2652981 | Sensitive | lineage4.1.2.1 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | ERR2653138 | MDR-TB | lineage4.1.2.1 | None | ERR2660490 | Sensitive | lineage4.3.2.1 | None | ERR2660545 | Sensitive | lineage4.3.2.1 | None | ERR2660536 | Sensitive | lineage2.2.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR2660542 | Sensitive | lineage4.3.2.1;lineage2.2.1 | None | ERR4821551 | Sensitive | lineage4.9 | None | SRR6484909 | Sensitive | lineage2.2.1 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | SRR6044925 | Sensitive | lineage4.9 | None | ERR2843536 | Other | lineage2.2.1 | None | ERR4872193 | MDR-TB | lineage4.6 | None | ERR502480 | Other | lineage5.1.1 | None | ERR4831711 | HR-TB | lineage2.2.1.1 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | ERR4831722 | HR-TB | lineage2.2.1 | None | SRR6824550 | Sensitive | lineage4.5 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6824516 | Sensitive | lineage2.2.1.1 | None | ERR5087606 | Other | La1.8.1 | None | SRR6824603 | Sensitive | lineage4.4.2 | None | ERR323036 | HR-TB | None | ERR502507 | Sensitive | lineage5.1.4 | None | ERR5087907 | Other | La1.8.1 | None | SRR6982053 | Sensitive | lineage4.9;lineage4.3.4.1 | None | ERR502527 | Sensitive | lineage6.2.2 | gh | ERR5311093 | Other | La1.8.1 | None | ERR5311076 | Other | La1.8.1 | None | ERR1063855 | Other | lineage4 | None | ERR5087707 | Other | La1.8.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | ERR323068 | Sensitive | lineage4.9 | None | DRR184621 | Sensitive | lineage1.1.1.1 | None | DRR184913 | Sensitive | lineage2.2.1 | None | ERR5311088 | Other | La1.8.1 | None | SRR8600071 | Other | La1.8.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR036233 | Sensitive | lineage4.3.4.1;lineage1.1.2 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR1082121 | Sensitive | lineage4.9 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3324375 | Other | lineage1.1.3.2 | None | ERR3324348 | Other | lineage1.1.3.2 | None | ERR4187636 | Other | La1.8.1 | None | ERR3470682 | Other | lineage3 | None | ERR3804154 | Sensitive | lineage4.1.2.1 | None | ERR4024588 | Other | lineage4.1.1 | None | ERR4024812 | Sensitive | lineage4.1.2.1 | None | ERR3797007 | Other | La1.8.1 | None | ERR4187819 | Other | La1.8 | None | ERR4187645 | Other | La1.8.1 | None | ERR4187800 | Other | La1.8.1 | None | ERR4187869 | Other | La1.8.1 | None | ERR4187916 | Other | La1.8.1 | None | ERR4187952 | Other | La1.8.1 | None | ERR4188381 | Other | La1.8.1 | None | ERR4188021 | Other | La1.8.1 | None | ERR4188080 | Other | La1.8.1 | None | ERR4188222 | MDR-TB | La1.8.1 | None | ERR4188375 | Sensitive | lineage4.9 | None | ERR4187993 | Other | La1.8.1 | None | ERR4188395 | Other | La1.8.1 | None | ERR473341 | Sensitive | lineage4.1.1.3 | None | ERR4627369 | Other | La1.8.1 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR473298 | Sensitive | lineage4.6.2.2 | None | ERR4769471 | Other | La1.3 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769467 | Sensitive | lineage4.9 | None | ERR4769412 | Sensitive | lineage4.9 | None | ERR4769428 | Other | La1.3 | None | ERR4769462 | Other | La1.3 | None | ERR4769470 | Sensitive | lineage4.9 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769482 | Sensitive | La1 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769537 | Sensitive | lineage4.9 | None | ERR4769562 | Other | La1.2 | None | ERR4769549 | Sensitive | lineage4.9 | None | ERR4772218 | Other | La1.2 | None | ERR4769561 | Other | La1.3 | None | ERR4772210 | Other | La1.2 | None | ERR4796348 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR5987447 | MDR-TB | lineage2.2.1 | None | ERR4812577 | Sensitive | lineage4.3.3 | pe | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | ERR6865691 | Other | lineage4.1.1 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR6865901 | Sensitive | lineage4.1.2.1 | None | ERR6866368 | Sensitive | lineage4.1.2.1 | None | ERR6866821 | Sensitive | lineage4.1.2.1 | None | ERR7821222 | Sensitive | lineage4.8.1 | None | ERR7821140 | Sensitive | lineage2.2.1.1 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR9119591 | MDR-TB | lineage4.6 | None | ERR9119761 | MDR-TB | lineage2.2.1 | None | ERR9119683 | Other | lineage4.2.1 | None |
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