EBG00000313339 - n.2572C>G


Drug resistance types
106 Sensitive 13 RR-TB 16 HR-TB 28 MDR-TB 12 Pre-XDR-TB 2 XDR-TB 208 Other
lineage Counts
lineage Count
lineage4.1.2 6
lineage3 14
lineage4.9 37
lineage4.1.2.1 25
lineage3.1.2 2
lineage4.3.2.1 6
lineage4.7 2
La3 1
lineage2.2.1 131
lineage4.2.2.2;lineage3 1
lineage4.4.1.1 7
lineage1.1.3.3 1
lineage1.1.3.1 2
lineage4.2.2.2 1
lineage3.1.1 5
lineage4.8.1 1
lineage4.3.2 2
lineage4.6 1
lineage4 4
lineage4.1.1.3 5
lineage4.3.3 14
lineage4.8 9
lineage2.2 2
8
lineage4.1.1 2
lineage4.3.4.2 6
lineage4.2.1 1
lineage4.4.1 1
La1.8.1 27
lineage4.9;La1.8.1 2
lineage4;lineage2 1
lineage6.3.1 2
lineage2.2.1.1 4
lineage4.3.4.1 3
lineage1.1.2 3
lineage4.1 1
lineage6.2.2 2
lineage4;La1 1
La1.8 1
La1 1
La1.3 5
La1.2 5
lineage2.2.2 2
lineage4.6.1.2 2
lineage4.4.1.2 1
lineage4.3.4.2.1 2
lineage1.1.1.1 1
lineage6 2
La1.6 2
lineage1.2.1.2.1 2
lineage1.2.2.2 1
La1.4 2
La1.7.1 1
lineage4.4.2 1
lineage4.5 3
lineage4.6.1.1 1
lineage4.6.4 1
lineage4.6.5 1
lineage4.8;lineage2.2.1 1
lineage4.2 1
lineage4;lineage3 1
lineage3.1.3 1
lineage1.2.2 1
spoligotype Counts
spoligotype Count
None 385
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SAMN02585942 Sensitive lineage4.1.2 None
ERR4820161 Other lineage3 None
ERR4820918 Other lineage4.9 None
ERR2693238 HR-TB lineage4.9 None
ERR4820959 Other lineage4.1.2.1 None
SRR6045683 Other lineage3.1.2 None
ERR4821222 Other lineage4.3.2.1 None
ERR4821288 Other lineage4.7 None
ERR4821413 Other La3 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4821701 Sensitive lineage4.9 None
SRR5818694 RR-TB lineage4.2.2.2;lineage3 None
SRR6045849 Other lineage4.4.1.1 None
SRR6044784 MDR-TB lineage3 None
SRR6044925 Sensitive lineage4.9 None
SRR6044817 Other lineage3 None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6045312 Other lineage1.1.3.3 None
SRR6045321 Other lineage1.1.3.1 None
SRR6046246 Other lineage3 None
SRR6045957 Other lineage4.9 None
SRR6045992 Other lineage3 None
ERR2843536 Other lineage2.2.1 None
SRR6046752 Sensitive lineage4.2.2.2 None
SRR6046766 Other lineage3.1.1 None
SRR6982410 Other lineage4.8.1 None
SRR6046891 Other lineage4.7 None
SRR6397389 Sensitive lineage4.1.2.1 None
SRR6367397 Other lineage4.1.2.1 None
ERR4972536 XDR-TB lineage4.3.2 None
ERR4872193 MDR-TB lineage4.6 None
SRR6982115 Sensitive lineage4 None
SRR6982138 Sensitive lineage4 None
SRR6982418 Sensitive lineage4.1.1.3 None
SRR6982508 Sensitive lineage4.9 None
SRR6785282 Other lineage4.3.3 None
SRR6785301 Sensitive lineage2.2.1 None
SRR6982168 Sensitive lineage4.4.1.1 None
SRR6982419 Other lineage4.8 None
SRR6982178 Sensitive lineage2.2 None
SRR6981962 Sensitive None
SRR6982272 Sensitive lineage4.9 None
SRR6982297 Sensitive lineage4.1.1 None
SRR6982465 Sensitive lineage4.3.4.2 None
SRR6982342 Sensitive lineage4.3.2.1 None
SRR6807688 Pre-XDR-TB lineage4.2.1 None
SRR6982349 Sensitive lineage2.2.1 None
SRR6981912 Sensitive None
SRR6981948 Sensitive lineage4.3.2.1 None
SRR6982257 RR-TB lineage4.1.2.1 None
SRR6982472 Sensitive lineage4.4.1.1 None
SRR6981918 Sensitive lineage4.4.1 None
SRR6982471 Sensitive lineage2.2.1 None
SRR6982070 RR-TB None
SRR6824572 MDR-TB lineage2.2.1 None
SRR9971243 Pre-XDR-TB lineage4.3.3 None
ERR5311076 Other La1.8.1 None
ERR5311086 Sensitive lineage4.9;La1.8.1 None
ERR5311088 Other La1.8.1 None
SRR6982510 Sensitive lineage4;lineage2 None
ERR5162108 Other La1.8.1 None
SRR7131152 MDR-TB lineage2.2.1 None
SRR7131294 Other lineage6.3.1 None
SRR7131234 Other lineage4.9 None
SRR7131257 Other lineage6.3.1 None
SRR9971076 Sensitive lineage2.2.1.1 None
SRR9970983 MDR-TB lineage4.3.3 None
SRR9970995 XDR-TB lineage4.3.3 None
SRR7276707 Sensitive lineage4.3.4.1 None
SRR7516342 Sensitive lineage4.8 None
SRR7516395 MDR-TB lineage2.2.1 None
ERR323061 Sensitive lineage4.9 None
SRR9971195 MDR-TB lineage4.3.3 None
ERR037235 Sensitive lineage4.9 None
ERR037234 Sensitive lineage4.9 None
ERR3283041 Other lineage4.9 None
ERR1063890 Sensitive lineage3.1.1 None
ERR1063888 HR-TB lineage1.1.2 None
ERR137226 MDR-TB lineage2.2.1 None
ERR144568 Pre-XDR-TB None
ERR3283028 Other None
ERR10796625 RR-TB lineage4.4.1.1 None
ERR3283008 Other lineage4.9 None
ERR3283043 Other lineage4.9 None
ERR3324329 HR-TB lineage4.1.1.3 None
ERR3283046 MDR-TB lineage4.9 None
ERR3283048 HR-TB lineage4.9 None
ERR3283053 Other lineage4.9 None
ERR3439285 Sensitive lineage4.9 None
ERR3324345 RR-TB lineage4.1 None
ERR3439229 Other La1.8.1 None
ERR3439301 Other lineage4.9;La1.8.1 None
ERR3797007 Other La1.8.1 None
ERR3470682 Other lineage3 None
ERR3797024 Other lineage4.9 None
ERR3797074 Sensitive lineage4.9 None
ERR3797051 Sensitive lineage4.9 None
ERR4187604 RR-TB La1.8.1 None
ERR4178216 Sensitive lineage4.1.2.1 None
ERR3804140 Sensitive lineage6.2.2 None
ERR4187636 Other La1.8.1 None
ERR4187645 Other La1.8.1 None
ERR4187641 Other lineage4;La1 None
ERR4187666 Other La1.8.1 None
ERR4187720 Other La1.8.1 None
ERR4187819 Other La1.8 None
ERR4187993 Other La1.8.1 None
ERR4187869 Other La1.8.1 None
ERR4187921 Other None
ERR4187916 Other La1.8.1 None
ERR4187995 Other La1.8.1 None
ERR4188035 Other La1.8.1 None
ERR4188021 Other La1.8.1 None
ERR4188158 Other lineage4.9 None
ERR4188372 RR-TB La1.8.1 None
ERR4188202 Other La1.8.1 None
ERR4188213 HR-TB La1.8.1 None
ERR4188273 Other La1.8.1 None
ERR4188330 Other La1.8.1 None
ERR4188352 Other La1.8.1 None
ERR4188375 Sensitive lineage4.9 None
ERR4188369 Other La1.8.1 None
ERR4188381 Other La1.8.1 None
ERR4188396 Sensitive La1 None
ERR4188395 Other La1.8.1 None
ERR6197028 Other lineage4.9 None
ERR4769479 Other La1.3 None
ERR4769503 Other La1.2 None
ERR4769518 Sensitive lineage4.9 None
ERR4769549 Sensitive lineage4.9 None
ERR4772218 Other La1.2 None
ERR4808980 Pre-XDR-TB lineage2.2.2 None
ERR6197024 RR-TB lineage4.9 None
ERR4769404 Other La1.3 None
ERR4769412 Sensitive lineage4.9 None
ERR4769453 Other La1.3 None
ERR4769470 Sensitive lineage4.9 None
ERR4769506 Sensitive La1.3 None
ERR4769546 Other La1.3 None
ERR4772210 Other La1.2 None
ERR4772206 Other La1.2 None
ERR6197032 Other lineage4.9 None
ERR6338285 Other La1.2 None
ERR6358728 MDR-TB lineage4.6.1.2 None
ERR6359064 Sensitive lineage4.9 None
ERR6865773 Sensitive lineage4.1.2.1 None
ERR736816 Other lineage4.9 None
ERR736805 Sensitive lineage2.2.1 None
ERR6866579 Sensitive lineage4.1.2.1 None
ERR6866821 Sensitive lineage4.1.2.1 None
ERR736822 Sensitive lineage4.4.1.2 None
ERR751317 Sensitive lineage4.9 None
ERR8774091 Sensitive lineage4.1.1.3 None
ERR8774092 Sensitive lineage4.1.1.3 None
ERR9117681 Other lineage4.3.3 None
ERR8774089 Sensitive lineage4.1.1.3 None
ERR036200 Sensitive lineage4.1.2 None
ERR037535 Sensitive lineage4.3.4.2.1 None
ERR9786498 Sensitive lineage4.1.2.1 None
ERR9786258 Sensitive lineage4.3.4.1 None
ERR9786008 Sensitive lineage1.1.1.1 None
ERR9787335 Sensitive lineage6 None
ERR9787022 Other lineage6 None
ERR9787142 Sensitive lineage6.2.2 None
ERR9992612 Pre-XDR-TB lineage4.3.3 None
ERR987734 HR-TB lineage4.3.4.2 None
ERR987695 HR-TB lineage4.3.4.2 None
SRR10315751 MDR-TB lineage4.8 None
SRR10315486 MDR-TB lineage2.2.1 None
SRR10315701 MDR-TB lineage4.3.3 None
SRR10315465 MDR-TB lineage4.4.1.1 None
SRR10726045 MDR-TB lineage4.3.3 None
SRR10869160 Sensitive lineage2.2.1.1 None
SRR10808446 Sensitive lineage4.3.4.1 None
SRR10851629 Sensitive lineage4.3.3 None
SRR10993944 Other La1.6 None
SRR10869318 Sensitive lineage2.2.1 None
SRR10993953 Other La1.6 None
SRR11342656 MDR-TB lineage2.2.1 None
SRR11342685 HR-TB lineage4.4.1.1 None
SRR11349205 MDR-TB lineage2.2.1 None
SRR1181136 Sensitive lineage2.2 None
SRR1181085 Sensitive lineage4.1.2 None
SRR11871430 Pre-XDR-TB lineage2.2.1 None
SRR1181242 Sensitive lineage4.1.2 None
SRR1181319 Other lineage2.2.1 None
SRR11972175 MDR-TB lineage2.2.1 None
SRR11972188 MDR-TB lineage2.2.1 None
SRR11972387 MDR-TB lineage2.2.1 None
SRR11972212 MDR-TB lineage2.2.1.1 None
SRR11972274 RR-TB lineage1.2.1.2.1 None
SRR12199409 Other lineage1.2.2.2 None
SRR11972407 Pre-XDR-TB lineage2.2.1 None
SRR14164379 Other lineage4.1.2.1 None
SRR12882669 RR-TB lineage3.1.1 None
SRR13423629 MDR-TB lineage2.2.1 None
SRR12882374 Sensitive lineage3.1.1 None
SRR12931719 Other lineage4.3.4.2 None
SRR14164796 Sensitive lineage4.1.2.1 None
SRR16278292 Other La1.4 None
SRR14164958 Sensitive lineage4.3.4.2 None
SRR14802191 Sensitive lineage2.2.1 None
SRR16278273 Other La1.4 None
SRR16295735 Sensitive lineage2.2.1 None
SRR16295737 Other lineage2.2.1 None
SRR16295733 Sensitive lineage2.2.1 None
SRR16295741 Other lineage2.2.1 None
SRR16295743 Other lineage2.2.1 None
SRR16295742 Other lineage2.2.1 None
SRR16295747 Other lineage2.2.1 None
SRR16295746 Other lineage2.2.1 None
SRR16295748 Other lineage2.2.1 None
SRR16295740 Other lineage2.2.1 None
SRR16295745 Other lineage2.2.1 None
SRR16295744 Other lineage2.2.1 None
SRR16295749 Other lineage2.2.1 None
SRR16295752 Other lineage2.2.1 None
SRR16295750 Other lineage2.2.1 None
SRR16295751 Other lineage2.2.1 None
SRR16295754 Other lineage2.2.1 None
SRR16295753 Other lineage2.2.1 None
SRR16295731 Sensitive lineage2.2.1 None
SRR16295758 Other lineage2.2.1 None
SRR16295755 Other lineage2.2.1 None
SRR16295761 Other lineage2.2.1 None
SRR16295756 Other lineage2.2.1 None
SRR16295760 Other lineage2.2.1 None
SRR16295757 Other lineage2.2.1 None
SRR16295763 Other lineage2.2.1 None
SRR16295765 Other lineage2.2.1 None
SRR16295764 Other lineage2.2.1 None
SRR16295762 Other lineage2.2.1 None
SRR16295767 Other lineage2.2.1 None
SRR16295766 Other lineage2.2.1 None
SRR16295771 Other lineage2.2.1 None
SRR16295768 Other lineage2.2.1 None
SRR16295738 Other lineage2.2.1 None
SRR16295770 Other lineage2.2.1 None
SRR16295769 Other lineage2.2.1 None
SRR16295777 Other lineage2.2.1 None
SRR16295772 Other lineage2.2.1 None
SRR16295773 Other lineage2.2.1 None
SRR16295782 Other lineage2.2.1 None
SRR16295775 Other lineage2.2.1 None
SRR16295779 Other lineage2.2.1 None
SRR16295736 Sensitive lineage2.2.1 None
SRR16295785 Other lineage2.2.1 None
SRR16295739 Other lineage2.2.1 None
SRR16295786 Other lineage2.2.1 None
SRR16295776 Other lineage2.2.1 None
SRR16295734 Other lineage2.2.1 None
SRR16295732 Other lineage2.2.1 None
SRR16295788 Other lineage2.2.1 None
SRR16295783 Other lineage2.2.1 None
SRR16295790 Other lineage2.2.1 None
SRR16295774 Other lineage2.2.1 None
SRR16295784 Other lineage2.2.1 None
SRR16295797 Other lineage2.2.1 None
SRR16295791 Other lineage2.2.1 None
SRR16295780 Other lineage2.2.1 None
SRR16295789 Other lineage2.2.1 None
SRR16295781 Other lineage2.2.1 None
SRR16295799 Other lineage2.2.1 None
SRR16295792 Other lineage2.2.1 None
SRR16295801 Other lineage2.2.1 None
SRR16295793 Other lineage2.2.1 None
SRR16295804 Other lineage2.2.1 None
SRR16295787 Other lineage2.2.1 None
SRR16295795 Sensitive lineage2.2.1 None
SRR16295798 Other lineage2.2.1 None
SRR16295807 Other lineage2.2.1 None
SRR16295796 Sensitive lineage2.2.1 None
SRR16295809 Other lineage2.2.1 None
SRR16295808 Other lineage2.2.1 None
SRR16295816 Other lineage2.2.1 None
SRR16295800 Sensitive lineage2.2.1 None
SRR16295803 Sensitive lineage2.2.1 None
SRR16295811 Other lineage2.2.1 None
SRR16295805 Other lineage2.2.1 None
SRR16295817 Other lineage2.2.1 None
SRR16295810 Other lineage2.2.1 None
SRR16295806 Other lineage2.2.1 None
SRR16295802 Other lineage2.2.1 None
SRR16295819 Other lineage2.2.1 None
SRR16295813 Other lineage2.2.1 None
SRR16295822 Other lineage2.2.1 None
SRR16295826 Other lineage2.2.1 None
SRR16295812 Other lineage2.2.1 None
SRR16295831 Other lineage2.2.1 None
SRR16295830 Other lineage2.2.1 None
SRR16295820 Other lineage2.2.1 None
SRR16295829 Other lineage2.2.1 None
SRR16295828 Other lineage2.2.1 None
SRR16295814 Other lineage2.2.1 None
SRR16295825 Other lineage2.2.1 None
SRR16295821 Other lineage2.2.1 None
SRR16295824 Other lineage2.2.1 None
SRR16295827 Sensitive lineage2.2.1 None
SRR16295818 Sensitive lineage2.2.1 None
SRR1792232 Other La1.7.1 None
SRR17406743 HR-TB lineage1.1.2 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR1792378 Other La1.8.1 None
SRR1792265 Other La1.8.1 None
SRR18002954 Other lineage2.2.1 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR2101087 Other lineage4.4.2 None
SRR18149443 Sensitive lineage3 None
SRR19304029 Other lineage4.8 None
SRR20969369 Other lineage1.2.1.2.1 None
SRR20970034 HR-TB lineage4.5 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18213736 MDR-TB lineage3 None
SRR18213800 Other lineage3.1.2 None
SRR19304095 Other lineage4.1.2.1 None
SRR2101529 Sensitive lineage4.3.2.1 None
SRR21240181 Sensitive lineage4.3.3 None
SRR2101540 Sensitive lineage4.3.2.1 None
SRR2101816 Other lineage4.8 None
SRR21239825 Sensitive lineage4.3.4.2 None
SRR21240012 Sensitive lineage4.1.2.1 None
SRR21240038 Other lineage4.1.2.1 None
SRR21240064 Sensitive lineage4.3.3 None
SRR21240093 Other lineage4.1.2.1 None
SRR21240138 Sensitive lineage4.1.2.1 None
SRR21240141 Other lineage4.3.3 None
SRR21240242 Sensitive lineage4.3.3 None
SRR21277822 Sensitive lineage2.2.1.1 None
SRR21675848 Other lineage1.1.3.1 None
ERR176780 Sensitive lineage4.9 None
SRR21747022 Pre-XDR-TB lineage2.2.2 None
ERR1465744 Sensitive lineage4.1.2.1 None
ERR2179785 Sensitive lineage4.5 None
SRR3675213 Other lineage4 None
ERR4815618 Other lineage4.8 None
ERR1198988 Sensitive lineage4.6.1.1 None
ERR1679639 Other lineage4.6.4 None
ERR1665402 MDR-TB lineage2.2.1 None
ERR4814745 Other lineage4.6.5 None
ERR4814763 Other lineage2.2.1 None
ERR4814923 Other lineage4.3.2 None
ERR176482 Sensitive lineage4.3.4.2.1 None
ERR4815792 Other lineage4.1.2.1 None
ERR4815551 Other lineage2.2.1 None
ERR4816969 Other lineage4.8 None
SRR3675447 Other lineage3 None
ERR176740 HR-TB None
ERR2446456 HR-TB lineage4.4.1.1 None
ERR4815909 Other lineage4.8 None
SRR4033203 Sensitive lineage4.9 None
SRR3675557 Other lineage4.9 None
ERR4816310 HR-TB lineage4.6.1.2 None
ERR4816579 Other lineage3 None
ERR4816029 Other lineage2.2.1 None
ERR4816283 Other lineage4.1.2.1 None
ERR4817102 Sensitive None
ERR4817134 HR-TB lineage2.2.1 None
ERR4817391 Other lineage4.1.2 None
ERR4816866 Other lineage2.2.1 None
DRR184902 Sensitive lineage4.8;lineage2.2.1 vn
ERR3275866 Other lineage4.1.2.1 nl
ERR2179737 HR-TB lineage4.2 None
ERR2510736 Other lineage4.1.2.1 None
SRR5065352 Sensitive lineage2.2.1 None
ERR4817710 Other lineage1.1.2 None
SRR4034769 Other lineage4.1.1 None
ERR2510738 Sensitive lineage4.8 None
ERR4818028 Other lineage4.1.2.1 None
ERR245740 Sensitive lineage4.1.2 None
ERR2179695 Sensitive lineage4.5 None
ERR4819307 RR-TB lineage4 None
SRR4037619 Sensitive lineage4.3.2.1 None
ERR4818369 Sensitive lineage4.9 None
SRR5341460 Other lineage3 None
SRR5007155 HR-TB lineage4.1.2.1 None
SRR5007163 MDR-TB lineage4;lineage3 None
SRR5007204 Other lineage4.1.2.1 None
SRR5341317 Pre-XDR-TB lineage3 None
ERR4820746 RR-TB lineage3 None
ERR4820478 Other lineage3.1.3 None
ERR4820801 Other lineage1.2.2 None
ERR2514753 Other lineage3 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4820075 Other lineage4.1.2.1 None