EBG00000313339 - n.2572C>G
Drug resistance types
91 Sensitive
4 RR-TB
21 HR-TB
25 MDR-TB
9 Pre-XDR-TB
1 XDR-TB
150 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 28 |
| lineage2.2.1 | 114 |
| La1.3 | 2 |
| La1.4 | 2 |
| lineage4.8.1 | 2 |
| lineage1.2.2.2 | 2 |
| lineage4.3.2.1 | 7 |
| lineage4.1.2.1 | 13 |
| lineage2.2.1;lineage4.8 | 1 |
| La1.7.1 | 1 |
| lineage4.3.3 | 12 |
| lineage4.1.2 | 4 |
| La1.8.1 | 21 |
| lineage4.3.2 | 1 |
| lineage3 | 10 |
| lineage4.2.2 | 14 |
| lineage4.8 | 7 |
| lineage4.1.1.1;lineage4.9 | 1 |
| lineage1.2.1.2.1 | 2 |
| La1.2 | 2 |
| lineage4.2.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.4.1.1 | 5 |
| lineage4.4.1.1.1 | 1 |
| lineage4.1.1.3 | 4 |
| La1.8.1;lineage4.9 | 4 |
| lineage4.6.1.1 | 1 |
| lineage4.5 | 2 |
| lineage6.2.2 | 2 |
| lineage1.1.1.1 | 1 |
| lineage3.1.1 | 4 |
| lineage4.3.4.2 | 4 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.3.4.1 | 4 |
| La1.6 | 1 |
| lineage4.6.1.2 | 1 |
| lineage2.2.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.2.1.1 | 3 |
| lineage1.1.2 | 2 |
| La1.8.1;lineage4 | 1 |
| lineage3;lineage4.2.2.2 | 1 |
| lineage6.3.1 | 1 |
| La3;lineage4 | 1 |
| lineage6.1.3 | 1 |
| lineage4.1 | 1 |
| lineage4.6.4 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 301 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6359064 | Sensitive | lineage4.9 | None | SRR11349205 | MDR-TB | lineage2.2.1 | None | SRR16295743 | Other | lineage2.2.1 | None | SRR16295751 | Other | lineage2.2.1 | None | SRR16295822 | Other | lineage2.2.1 | None | ERR4769412 | Sensitive | lineage4.9 | None | ERR4769546 | Other | La1.3 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR16278292 | Other | La1.4 | None | SRR16295792 | Other | lineage2.2.1 | None | SRR16295786 | Other | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR16295829 | Other | lineage2.2.1 | None | SRR12199409 | Other | lineage1.2.2.2 | None | ERR2600574 | MDR-TB | lineage2.2.1 | None | SRR7516395 | MDR-TB | lineage2.2.1 | None | SRR6981912 | Sensitive | lineage4.3.2.1 | None | SRR16295764 | Other | lineage2.2.1 | None | SRR16295771 | Other | lineage2.2.1 | None | SRR16295798 | Other | lineage2.2.1 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | DRR184902 | Sensitive | lineage2.2.1;lineage4.8 | vn | SRR1792232 | Other | La1.7.1 | None | SRR9970995 | XDR-TB | lineage4.3.3 | None | SRR4037619 | Sensitive | lineage4.3.2.1 | None | SRR10869318 | Sensitive | lineage2.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR16295749 | Other | lineage2.2.1 | None | SRR1792378 | Other | La1.8.1 | None | SRR6982115 | Sensitive | lineage4.3.2 | None | SRR11972387 | MDR-TB | lineage2.2.1 | None | ERR4188021 | Other | La1.8.1 | None | SRR21240038 | Other | lineage4.1.2.1 | None | SRR1202713 | Sensitive | lineage4.9 | None | SRR1181147 | Other | lineage4.9 | None | SRR16295738 | Other | lineage2.2.1 | None | SRR16295788 | Other | lineage2.2.1 | None | SRR18149443 | Sensitive | lineage3 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | ERR036200 | Sensitive | lineage4.1.2 | None | ERR1665402 | MDR-TB | lineage2.2.1 | None | SRR1202728 | Other | lineage4.9 | None | SRR7069784 | Other | lineage1.2.2.2 | None | ERR4188395 | Sensitive | La1.8.1 | None | ERR3470682 | Other | lineage3 | None | ERR4188352 | Sensitive | La1.8.1 | None | SRR16295756 | Other | lineage2.2.1 | None | ERR867569 | Other | lineage4.9 | None | SRR16295830 | Other | lineage2.2.1 | None | SRR16295776 | Other | lineage2.2.1 | None | SRR16295825 | Other | lineage2.2.1 | None | ERR3559279 | HR-TB | lineage4.2.2 | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | ERR867567 | RR-TB | lineage3 | None | SRR16295813 | Other | lineage2.2.1 | None | SRR16295826 | Other | lineage2.2.1 | None | SRR11972407 | Pre-XDR-TB | lineage2.2.1 | None | SRR16295768 | Other | lineage2.2.1 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR6982297 | Sensitive | lineage4.1.1.1;lineage4.9 | None | SRR16295801 | Other | lineage2.2.1 | None | SRR19304095 | Other | lineage4.1.2.1 | None | SRR5341460 | Other | lineage3 | None | SRR20969369 | Other | lineage1.2.1.2.1 | None | ERR6338285 | Other | La1.2 | None | SRR16295824 | Other | lineage2.2.1 | None | ERR3559283 | HR-TB | lineage4.2.2 | None | SRR16295777 | Other | lineage2.2.1 | None | SRR16295763 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR2179737 | HR-TB | lineage4.2.1 | None | ERR4772210 | Other | La1.2 | None | SRR16278273 | Other | La1.4 | None | ERR037535 | Sensitive | lineage4.3.4.2.1 | None | SRR6046752 | Sensitive | lineage4.2.2.2 | None | ERR4816579 | Other | lineage3 | None | ERR4187995 | Sensitive | La1.8.1 | None | SRR14802191 | Sensitive | lineage2.2.1 | None | SRR16295821 | Other | lineage2.2.1 | None | ERR4769479 | Other | La1.3 | None | ERR4187993 | Sensitive | La1.8.1 | None | ERR3797007 | Other | La1.8.1 | None | ERR6866821 | Sensitive | lineage4.1.2.1 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR21240141 | Other | lineage4.3.3 | None | SRR16295802 | Other | lineage2.2.1 | None | SRR16295796 | Other | lineage2.2.1 | None | SRR16295740 | Other | lineage2.2.1 | None | SRR16295769 | Other | lineage2.2.1 | None | SRR16295773 | Other | lineage2.2.1 | None | SRR6397389 | Sensitive | lineage4.1.2.1 | None | SRR6824572 | MDR-TB | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4187921 | Sensitive | lineage4.9 | None | ERR4187641 | Sensitive | La1.8.1;lineage4.9 | None | ERR4769470 | Sensitive | lineage4.9 | None | SRR16295799 | Other | lineage2.2.1 | None | ERR1198988 | Sensitive | lineage4.6.1.1 | None | SRR16295793 | Other | lineage2.2.1 | None | ERR3559286 | HR-TB | lineage4.2.2 | None | SRR16295760 | Other | lineage2.2.1 | None | SRR16295736 | Other | lineage2.2.1 | None | ERR5311076 | Other | La1.8.1 | None | SRR16295790 | Other | lineage2.2.1 | None | ERR3559284 | HR-TB | lineage4.2.2 | None | SRR20970034 | HR-TB | lineage4.5 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR16295770 | Other | lineage2.2.1 | None | SRR16295808 | Other | lineage2.2.1 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR2101816 | Other | lineage4.8 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR7069391 | Other | lineage4.9 | None | SRR1183402 | Other | lineage4.9 | None | SRR1202410 | Other | lineage4.9 | None | SRR6982138 | Sensitive | lineage4.1.1.3 | None | SRR11871430 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982178 | Sensitive | lineage2.2.1 | None | SRR16295766 | Other | lineage2.2.1 | None | ERR3283046 | Sensitive | lineage4.9 | None | ERR3559281 | HR-TB | lineage4.2.2 | None | ERR3559282 | HR-TB | lineage4.2.2 | None | ERR9787142 | Sensitive | lineage6.2.2 | None | SRR16295787 | Other | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | ERR9786008 | Sensitive | lineage1.1.1.1 | None | SRR1183168 | Other | lineage4.9 | None | SRR16295775 | Other | lineage2.2.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR12882669 | Sensitive | lineage3.1.1 | None | ERR2600576 | Pre-XDR-TB | lineage2.2.1 | None | SRR16295752 | Other | lineage2.2.1 | None | SRR2101529 | Sensitive | lineage4.3.2.1 | None | SRR16295806 | Other | lineage2.2.1 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | SRR12931719 | Other | lineage4.3.4.2 | None | ERR2843536 | Sensitive | lineage2.2.1 | None | SRR6982510 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR3559287 | HR-TB | lineage4.2.2 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | ERR4815551 | Other | lineage2.2.1 | None | SRR6981918 | Sensitive | lineage4.4.1.1 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | SRR7069704 | Sensitive | lineage4.3.3 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | SRR11342656 | MDR-TB | lineage2.2.1 | None | SRR6982070 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR7069946 | Other | lineage4.8 | None | ERR5311088 | Sensitive | La1.8.1 | None | SRR16295735 | Other | lineage2.2.1 | None | ERR4769506 | Sensitive | lineage4.9 | None | ERR4188375 | Sensitive | lineage4.9 | None | SRR6982272 | Sensitive | lineage4.9 | None | ERR4188381 | Other | La1.8.1 | None | SRR10808446 | Sensitive | lineage4.3.4.1 | None | ERR4769393 | Sensitive | lineage4.9 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | ERR3559276 | HR-TB | lineage4.2.2 | None | SRR18002954 | Other | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR3324329 | Sensitive | lineage4.1.1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | SRR7276707 | Sensitive | lineage4.3.4.1 | None | SRR10993944 | Other | La1.6 | None | ERR4816283 | Other | lineage4.1.2.1 | None | SRR16295814 | Other | lineage2.2.1 | None | SRR16295820 | Other | lineage2.2.1 | None | SRR6046246 | Other | lineage3 | None | SRR6982410 | Sensitive | lineage4.8.1 | None | ERR3559280 | HR-TB | lineage4.2.2 | None | SRR16295762 | Other | lineage2.2.1 | None | ERR2693238 | Sensitive | lineage4.9 | None | SRR7069137 | Other | lineage4.8 | None | SRR16295812 | Other | lineage2.2.1 | None | SRR16295818 | Other | lineage2.2.1 | None | ERR4188396 | Sensitive | La1.8.1;lineage4.9 | None | SRR7240350 | Other | La1.8.1 | None | ERR6358728 | MDR-TB | lineage4.6.1.2 | None | SRR21747022 | Pre-XDR-TB | lineage2.2.2 | None | ERR3559304 | HR-TB | lineage4.2.2 | None | SRR16295765 | Other | lineage2.2.1 | None | SRR5065352 | Sensitive | lineage2.2.1 | None | SRR16295731 | Other | lineage2.2.1 | None | SRR1183091 | Other | lineage4.9 | None | ERR4188330 | Sensitive | La1.8.1;lineage4.9 | None | SRR1181319 | Sensitive | lineage2.2.1 | None | SRR6982419 | Other | lineage4.8 | None | SRR16295791 | Other | lineage2.2.1 | None | ERR4188372 | Sensitive | La1.8.1;lineage4.9 | None | ERR2179695 | Sensitive | lineage4.5 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR21675848 | Other | lineage1.1.3.1 | None | SRR6807688 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971076 | Sensitive | lineage2.2.1.1 | None | SRR16295767 | Other | lineage2.2.1 | None | SRR1792265 | Other | La1.8.1 | None | SRR16295797 | Other | lineage2.2.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR245740 | Sensitive | lineage4.1.2 | None | SRR11342646 | HR-TB | lineage3 | None | SRR1181136 | Sensitive | lineage2.2.1 | None | SRR16295758 | Other | lineage2.2.1 | None | SRR16295809 | Other | lineage2.2.1 | None | SRR16295810 | Other | lineage2.2.1 | None | SRR16295741 | Other | lineage2.2.1 | None | SRR16295753 | Other | lineage2.2.1 | None | SRR16295816 | Other | lineage2.2.1 | None | SRR16295828 | Other | lineage2.2.1 | None | ERR1063888 | HR-TB | lineage1.1.2 | None | ERR4187819 | Sensitive | La1.8.1;lineage4 | None | ERR4188035 | Other | La1.8.1 | None | SRR5818694 | Other | lineage3;lineage4.2.2.2 | None | SRR16295780 | Other | lineage2.2.1 | None | SRR16295784 | Other | lineage2.2.1 | None | SRR16295817 | Other | lineage2.2.1 | None | SRR18213736 | Other | lineage3 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR16295742 | Other | lineage2.2.1 | None | ERR2600577 | Pre-XDR-TB | lineage2.2.1 | None | SRR7236398 | Other | La1.8.1 | None | SRR7131294 | Other | lineage6.3.1 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR16295748 | Other | lineage2.2.1 | None | SRR7236369 | Other | La1.8.1 | None | ERR3283028 | Other | La3;lineage4 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR11342669 | Other | lineage4.8 | None | SRR6045957 | Other | lineage4.9 | None | SRR16295746 | Other | lineage2.2.1 | None | SRR16295783 | Other | lineage2.2.1 | None | SRR16295789 | Sensitive | lineage2.2.1 | None | ERR1063890 | Sensitive | lineage3.1.1 | None | SRR21240012 | Sensitive | lineage4.1.2.1 | None | ERR4187916 | Other | La1.8.1 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | ERR867575 | Other | lineage4.9 | None | SRR6982508 | Sensitive | lineage4.9 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | ERR3275866 | Other | lineage4.1.2.1 | nl | SRR11342682 | Other | lineage4.1.2 | None | SRR16295744 | Other | lineage2.2.1 | None | SRR7236233 | Other | La1.8.1 | None | SRR16295750 | Other | lineage2.2.1 | None | ERR3559277 | HR-TB | lineage4.2.2 | None | SRR12882374 | Sensitive | lineage3.1.1 | None | SRR6981962 | Sensitive | lineage4.3.2.1 | None | SRR16295754 | Other | lineage2.2.1 | None | ERR4769549 | Sensitive | lineage4.9 | None | SRR21240138 | Sensitive | lineage4.1.2.1 | None | SRR5341317 | Pre-XDR-TB | lineage3 | None | ERR5311086 | Sensitive | lineage4.9 | None | ERR9786258 | Sensitive | lineage4.3.4.1 | None | SRR16295747 | Other | lineage2.2.1 | None | ERR4188213 | Other | La1.8.1 | None | SRR1182885 | Other | lineage4.9 | None | SRR14164379 | Other | lineage4.1.2.1 | None | SRR16295819 | Other | lineage2.2.1 | None | SRR16295811 | Other | lineage2.2.1 | None | SRR16295807 | Other | lineage2.2.1 | None | SRR16295779 | Other | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR3559275 | HR-TB | lineage4.2.2 | None | SRR3675447 | Other | lineage3 | None | SRR10869160 | Sensitive | lineage2.2.1.1 | None | ERR1334032 | Other | lineage6.1.3 | None | ERR3804140 | Sensitive | lineage6.2.2 | None | SRR6982257 | Sensitive | lineage4.1.2.1 | None | ERR2307498 | HR-TB | lineage2.2.1 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR5162108 | Other | La1.8.1 | None | SRR16295757 | Other | lineage2.2.1 | None | ERR3559274 | HR-TB | lineage4.2.2 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | SRR21240064 | Sensitive | lineage4.3.3 | None | ERR4187720 | Other | La1.8.1 | None | ERR3559307 | HR-TB | lineage4.2.2 | None | SRR14164958 | Sensitive | lineage4.3.4.2 | None | SRR16295755 | Other | lineage2.2.1 | None | SRR16295772 | Other | lineage2.2.1 | None | SRR21277822 | Sensitive | lineage2.2.1.1 | None | SRR21239825 | Sensitive | lineage4.3.4.2 | None | SRR16295737 | Other | lineage2.2.1 | None | SRR16295774 | Sensitive | lineage2.2.1 | None | SRR16295745 | Other | lineage2.2.1 | None | SRR16295782 | Other | lineage2.2.1 | None | SRR17406743 | HR-TB | lineage1.1.2 | None | SRR16295761 | Other | lineage2.2.1 | None | ERR3324345 | RR-TB | lineage4.1 | None | ERR4188202 | Other | La1.8.1 | None | ERR1679639 | Other | lineage4.6.4 | None | ERR9117681 | Sensitive | lineage4.3.3 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | ERR144568 | Sensitive | None | SRR6981948 | Sensitive | lineage4.3.2.1 | None | SRR6046766 | Other | lineage3.1.1 | None |
|---|
