EBG00000313339 - n.231T>A
Drug resistance types
63 Sensitive
29 RR-TB
60 HR-TB
31 MDR-TB
19 Pre-XDR-TB
0 XDR-TB
88 Other
lineage Counts
| lineage | Count |
|---|---|
| 53 | |
| lineage4.4.1.2 | 2 |
| lineage4 | 30 |
| lineage4.9 | 64 |
| La1.8.1 | 3 |
| lineage4;lineage3.1 | 1 |
| lineage1.1.2 | 2 |
| La1.2 | 1 |
| lineage3 | 13 |
| lineage2.2.1 | 30 |
| lineage2.2.2 | 1 |
| lineage3.1.2 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.2.1.1 | 1 |
| lineage4.9.1 | 2 |
| lineage1.1.3.1 | 2 |
| lineage4.7 | 2 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage4.1.2.1 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage2.2.1.1 | 6 |
| lineage4.3.2.1 | 3 |
| La1.6 | 2 |
| lineage4.1.2 | 5 |
| lineage2.2 | 4 |
| lineage1.1.1 | 2 |
| La2 | 2 |
| lineage4.2.1 | 6 |
| lineage4.4 | 1 |
| lineage3.1.3 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.6.1.1 | 1 |
| La1.7.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.1.3 | 1 |
| lineage4.8 | 8 |
| lineage4.5 | 2 |
| lineage4.4.1.1 | 2 |
| lineage4;lineage2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.1.1.3.1 | 1 |
| lineage5.1.1 | 2 |
| lineage4.8.1 | 1 |
| lineage4.3.3 | 3 |
| lineage4.2.1.1 | 1 |
| lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 290 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR133986 | HR-TB | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283040 | HR-TB | None | ERR144568 | Pre-XDR-TB | None | ERR3283028 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3797019 | Other | La1.8.1 | None | ERR3283047 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3439432 | Other | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4187921 | Other | None | ERR473332 | Other | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4772225 | Other | La1.2 | None | ERR4798406 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR6359069 | Other | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4808980 | Pre-XDR-TB | lineage2.2.2 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR6197030 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR736865 | HR-TB | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR736837 | Other | lineage4.9 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | ERR037504 | Other | lineage4.9.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR1011488 | Other | lineage2.2.1 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1013531 | MDR-TB | lineage4.9 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10808399 | Sensitive | lineage4 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR10993957 | Other | La1.6 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1172310 | HR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140736 | RR-TB | None | SRR11462861 | Other | La1.8.1 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1173740 | Other | None | SRR1173310 | MDR-TB | None | SRR1173170 | Other | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR1181251 | Other | lineage2.2.1 | None | SRR1181136 | Sensitive | lineage2.2 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR11972387 | MDR-TB | lineage2.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR14801749 | Sensitive | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR17832802 | HR-TB | lineage3 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR8692812 | Other | lineage4.9 | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692858 | Sensitive | lineage4.9 | None | SRR8692905 | HR-TB | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR8692771 | Other | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692825 | Other | lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR8692882 | HR-TB | lineage4.9 | None | ERR158583 | HR-TB | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR28119823 | Sensitive | lineage4.9 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SAMN02585910 | Other | lineage2.2.1 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4815310 | Other | None | ERR1198988 | Sensitive | lineage4.6.1.1 | None | ERR1815538 | Other | La1.7.1 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR161125 | Sensitive | lineage4.3.4 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR176450 | Sensitive | lineage4.1.1 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | ERR4815550 | Other | lineage4 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4815079 | RR-TB | lineage3 | None | ERR176740 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | SRR3675502 | Other | None | ERR4816417 | Other | lineage4.9 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | SRR3675550 | Other | None | ERR212034 | HR-TB | None | SRR3675571 | HR-TB | None | ERR2229197 | Sensitive | lineage4 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4815815 | Sensitive | lineage4 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR1035162 | Other | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4818825 | HR-TB | lineage4.1.2.1 | None | SRR4037619 | Sensitive | lineage4.3.2.1 | None | ERR4818831 | Other | lineage3 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR245810 | Sensitive | lineage4.9.1 | None | ERR4818904 | Other | lineage4.8 | None | ERR4819051 | Other | lineage4 | None | ERR4818499 | Sensitive | lineage4.9 | None | ERR4818384 | Other | lineage4.8 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5341460 | Other | lineage3 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR5341418 | Other | None | ERR4819357 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR5341430 | Other | lineage3 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4820503 | Other | lineage2.2.1 | None | ERR1023509 | Other | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341470 | HR-TB | None | ERR4820030 | Other | lineage4.9 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | ERR4821057 | HR-TB | lineage4 | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6045399 | Other | None | SRR6046250 | Other | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | SRR6046397 | Other | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6046460 | HR-TB | None | SRR6046839 | Other | lineage4.9 | None | SRR6046824 | HR-TB | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | SRR6046482 | HR-TB | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6982115 | Sensitive | lineage4 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR502494 | Other | lineage5.1.1 | None | SRR6982410 | Other | lineage4.8.1 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6982070 | RR-TB | None | SRR6981962 | Sensitive | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6982342 | Sensitive | lineage4.3.2.1 | None | SRR6981912 | Sensitive | None | ERR294266 | HR-TB | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR3132133 | MDR-TB | lineage4.5 | None | ERR323035 | Sensitive | lineage4.9 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR502524 | HR-TB | La2 | None | ERR502889 | Other | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7585435 | Other | lineage4.9 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7755657 | Other | lineage4.8 | None | ERR067681 | HR-TB | None | ERR323039 | HR-TB | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR323053 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR1034652 | Other | None | ERR1034687 | Sensitive | lineage3 | None | ERR1034634 | HR-TB | None | ERR1063855 | Other | lineage4 | None |
|---|
