EBG00000313339 - n.231T>A


Drug resistance types
44 Sensitive 16 RR-TB 32 HR-TB 33 MDR-TB 8 Pre-XDR-TB 0 XDR-TB 55 Other
lineage Counts
lineage Count
La3;lineage4.9 6
lineage4.3.4.2.1 6
lineage2.2.1 24
lineage1.2.2.2 1
lineage4.3.2;lineage4.9 1
lineage3;lineage4 1
lineage4.2.1 6
La1.8.1 1
lineage4.8 5
lineage4.9 73
La2;lineage4.9 1
lineage4.1.2.1;lineage4.4.1.1 1
lineage3 4
La1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.4.1.2 2
lineage1.1.1 1
lineage4.2;lineage4.9 2
lineage4.2;lineage4.8.1;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage1.1.2 1
lineage4.4.1.1.1 1
La1.6;La3;M.canetti;lineage4.2.2 1
lineage4.9;lineage9 2
lineage4 1
lineage4.1.2.1;lineage4.9 1
lineage4.9;lineage6.3 1
lineage4.1.2 2
lineage4.1.1.3 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage2.2.1.1 4
lineage4.9.1 1
lineage4.3.3 1
M.canetti;lineage4.2 1
lineage1.1.3.1 1
La1.7;lineage4.9 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 1
lineage4.1.2.1 2
lineage4.6.3;lineage4.9 1
lineage4.3.2.1 3
La1.7.1 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.2.2 1
lineage4.7 1
M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La2;lineage4.9;lineage9 1
lineage2.2.1;lineage4.9 2
1
lineage4.1.2.1;lineage4.4.1 1
La1.7;lineage4.9;lineage6 1
lineage4.6.2.2 1
lineage3.1.2.1 1
lineage2.2;lineage4.9 1
La1;lineage2;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.1.3 1
spoligotype Counts
spoligotype Count
None 188
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3283011 Other La3;lineage4.9 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR1181328 Other lineage2.2.1 None
SRR12708411 HR-TB lineage1.2.2.2 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
SRR1173740 Other lineage3;lineage4 None
SRR7646018 MDR-TB lineage4.2.1 None
ERR5311077 Other La1.8.1 None
ERR4829530 Pre-XDR-TB lineage4.8 None
ERR502474 RR-TB lineage4.9 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
ERR3283014 Other La3;lineage4.9 None
SRR1173281 Other lineage3 None
ERR133825 HR-TB La1;lineage4.9 None
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR126597 HR-TB lineage4.4.1.2 None
SRR21677886 Sensitive lineage4.9 None
SRR21658550 Other lineage1.1.1 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR1202388 Sensitive lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR1173770 Other lineage4.9 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
SRR1196478 Other lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR4815815 Sensitive lineage4.9 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR6044925 Sensitive lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
ERR245675 Sensitive lineage1.1.2 None
SRR3675502 Sensitive lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR7755657 Other lineage4.8 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
SRR7645971 Other lineage2.2.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR502481 RR-TB lineage4.9 None
SRR1202397 Sensitive lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR6046141 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
SRR1208264 Sensitive lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
SRR6832787 Other lineage2.2.1 None
SRR7645927 Other lineage4.8 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
SRR1202451 Sensitive lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
SRR1208575 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR1202520 Sensitive lineage4.9 None
ERR4798823 HR-TB lineage4 None
SRR14801749 HR-TB lineage4.9 None
SRR1208659 Other lineage4.9 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR3797063 Other La3;lineage4.9 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR28119823 Sensitive lineage4.9 None
ERR502473 RR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR7645906 Other lineage2.2.1 None
SRR7645899 Other lineage2.2.1 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
SRR1181085 Sensitive lineage4.1.2 None
SRR12708413 HR-TB lineage4.1.1.3 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR3797081 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR6045158 Other lineage4.9 None
SAMN02350446 Sensitive lineage2.2.1 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR1181319 Sensitive lineage2.2.1 None
SRR12708392 Other lineage2.2.1 None
SRR1208556 Sensitive lineage4.9 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
ERR037504 Other lineage4.9.1 None
SRR1173185 Other lineage4.9 None
SRR1011488 Sensitive lineage2.2.1 None
ERR4817915 Other lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
SRR12708419 Other lineage4.3.3 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR1183106 RR-TB lineage2.2.1.1 None
SAMN02585942 Sensitive lineage4.1.2 None
SRR1208327 Sensitive lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR779852 HR-TB lineage4.9 None
SAMN02585910 RR-TB lineage2.2.1 None
SRR6046385 Sensitive lineage4.9 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR1208886 Other lineage4.9 None
SRR10808668 Other lineage2.2.1 None
ERR3797079 Sensitive lineage4.9 None
SRR7755655 Other lineage4.1.2.1 None
SRR1202728 Other lineage4.9 None
SRR26159047 RR-TB lineage4.6.3;lineage4.9 None
ERR176741 Other lineage4.9 None
SRR1202570 Sensitive lineage4.9 None
SRR1208774 Sensitive lineage4.9 None
SRR1208196 Sensitive lineage4.9 None
SRR1202706 Other lineage4.9 None
SRR6981912 Sensitive lineage4.3.2.1 None
SRR1181251 Other lineage2.2.1 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR1815538 Other La1.7.1 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR2229198 Sensitive lineage4.8 None
SRR1140736 Other lineage4.1.2.1 None
SRR1202702 Other lineage4.9 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR6359066 HR-TB lineage4.9 None
SRR1208369 Other lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR7645928 Other lineage4.7 None
SRR7755649 MDR-TB lineage4.2.1 None
ERR4814639 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR1035162 MDR-TB M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4769474 HR-TB lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR1173170 Other lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
ERR4819546 HR-TB lineage3 None
ERR4818831 Other lineage3 None
ERR473332 Other lineage4.9 None
SRR1184329 Other lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
ERR4819383 RR-TB lineage4.9 None
SRR1208653 Other lineage4.9 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR1023509 MDR-TB lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
SRR1208539 Sensitive lineage4.9 None
SRR1183144 RR-TB lineage2.2.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
ERR987722 MDR-TB None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR12708418 HR-TB lineage2.2.1 None
SRR1202383 Sensitive lineage4.9 None
SRR1181136 Sensitive lineage2.2.1 None
ERR4815121 HR-TB lineage4.6.2.2 None
ERR6359070 Sensitive lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
SRR6832249 Sensitive lineage2.2.1 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
SRR5341430 Other lineage3 None
SRR6045832 Other lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
ERR4800102 Sensitive lineage3.1.2.1 None
SRR1202538 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
ERR067712 Sensitive lineage4.9 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR12708406 HR-TB lineage2.2.1;lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR1208211 Sensitive lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
SRR16156817 Other lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR1208626 Sensitive lineage4.9 None
ERR4816198 Sensitive lineage4.1.3 None