EBG00000313339 - n.231T>A
Drug resistance types
56 Sensitive
10 RR-TB
35 HR-TB
22 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
67 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 4 |
| lineage4.9 | 79 |
| lineage4.3.4.2.1 | 6 |
| lineage2.2.1 | 26 |
| La1.7;lineage4.9 | 2 |
| 1 | |
| lineage4.2.1 | 6 |
| lineage4.3.2.1 | 3 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4 | 1 |
| La1.7.1 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.1.2 | 2 |
| lineage4.1.2.1 | 2 |
| La2;lineage4.9 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.8 | 5 |
| lineage4.9;lineage9 | 2 |
| La3;lineage4.9 | 6 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3 | 4 |
| lineage4.4.1.2 | 2 |
| lineage3;lineage4 | 1 |
| lineage4.9.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.2;lineage4.9 | 2 |
| lineage4.7 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| lineage4.6.2.2 | 1 |
| lineage1.1.1 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage2.2.2 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| La1.8.1 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1;lineage4.9 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2 | 1 |
| lineage4.3.3 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.1.3 | 1 |
| lineage1.2.2.2 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 198 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1184024 | RR-TB | lineage2.2.1.1 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR176740 | Other | lineage4.9 | None | SRR1173450 | Other | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1196478 | Other | lineage4.9 | None | SRR1183145 | Other | lineage2.2.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | SRR7645971 | Other | lineage2.2.1 | None | ERR987722 | MDR-TB | None | SRR1173770 | Other | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR3675502 | Sensitive | lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | SRR1181136 | Sensitive | lineage2.2.1 | None | SRR1208211 | Sensitive | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR1208264 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR1208196 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR1815538 | Other | La1.7.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR6981912 | Sensitive | lineage4.3.2.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1202520 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR1202538 | Sensitive | lineage4.9 | None | SRR28119823 | Sensitive | lineage4.9 | None | SRR1202388 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR1202728 | Other | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR1202706 | Other | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR7645927 | Other | lineage4.8 | None | SRR1208575 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR1202702 | Other | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR1023509 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR4818831 | Other | lineage3 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR6045158 | Other | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR1184329 | Other | lineage4.9 | None | ERR037504 | Other | lineage4.9.1 | None | SRR1173185 | Other | lineage4.9 | None | SRR1011488 | Sensitive | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1208539 | Sensitive | lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR3797081 | Sensitive | lineage4.9 | None | SRR29097037 | Other | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173281 | Other | lineage3 | None | SRR6832787 | Sensitive | lineage2.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR4817915 | Other | lineage4.9 | None | SRR1202383 | Sensitive | lineage4.9 | None | SRR1208556 | Sensitive | lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR7645928 | Other | lineage4.7 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SAMN02585910 | Other | lineage2.2.1 | None | ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR502474 | RR-TB | lineage4.9 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR176741 | Other | lineage4.9 | None | SRR1208774 | Sensitive | lineage4.9 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR1181251 | Other | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR5341430 | Other | lineage3 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR1208626 | Sensitive | lineage4.9 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR1208369 | Other | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR5311077 | Other | La1.8.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR1181319 | Sensitive | lineage2.2.1 | None | SRR29097026 | Other | lineage4.9 | None | SRR6832249 | Sensitive | lineage2.2.1 | None | SRR28119843 | Sensitive | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR403298 | MDR-TB | M.canetti;lineage4.2 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1208327 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR1208653 | Other | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR1202570 | Sensitive | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR6045832 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR7755657 | Other | lineage4.8 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR1202451 | Sensitive | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR1208659 | Other | lineage4.9 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR1208886 | Other | lineage4.9 | None | ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1202397 | Sensitive | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None |
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