EBG00000313339 - n.1281G>A
Drug resistance types
90 Sensitive
11 RR-TB
19 HR-TB
26 MDR-TB
15 Pre-XDR-TB
0 XDR-TB
77 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7.1 | 3 |
| lineage2.2.1 | 23 |
| lineage4.1.2.1 | 7 |
| La1.4 | 1 |
| lineage1.1.2 | 2 |
| lineage4.3.3 | 6 |
| lineage4.8 | 21 |
| lineage4.5 | 1 |
| lineage3 | 6 |
| lineage3.1.1 | 5 |
| lineage4.6.2.2 | 5 |
| lineage4.9 | 38 |
| lineage4.1.1 | 1 |
| lineage1.1.3.2 | 2 |
| lineage2.2 | 2 |
| lineage4.3.4.2.1 | 5 |
| lineage4.3.4 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.1.2 | 8 |
| lineage1.2.2.2 | 3 |
| lineage4.6.1.1 | 1 |
| lineage2.2.2 | 4 |
| lineage4.9.1 | 1 |
| lineage4 | 6 |
| lineage4.1.1.3 | 5 |
| lineage4.2 | 1 |
| lineage4.2.1.1 | 2 |
| lineage4.1.1.3.1 | 3 |
| lineage4.4.1.1.1 | 4 |
| lineage6.3.1 | 1 |
| 6 | |
| lineage3.1.2.1 | 2 |
| lineage4.4.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.1.3.1 | 2 |
| lineage3.1.2 | 1 |
| lineage5.1.1 | 4 |
| lineage4.4.1.2 | 2 |
| lineage4.3.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.9;lineage4.3.4.1 | 1 |
| La1.8.1 | 21 |
| lineage4.9;La1.8.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.3 | 1 |
| lineage6.1.3 | 2 |
| La1.8 | 1 |
| La1.3 | 7 |
| La1 | 1 |
| La1.2 | 2 |
| lineage4.9;La1.3 | 1 |
| lineage1.1.1 | 2 |
| lineage4.1.2.1.1 | 1 |
| lineage4.7 | 1 |
| lineage4.8;lineage4.3.3 | 3 |
| lineage2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 238 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13199738 | Other | La1.7.1 | None | SRR13199739 | Other | La1.7.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782537 | Pre-XDR-TB | lineage2.2.1 | None | SRR21722120 | Sensitive | lineage4.1.2.1 | None | SRR16278273 | Other | La1.4 | None | SRR18002949 | Sensitive | lineage2.2.1 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR1792247 | Other | La1.7.1 | None | SRR21240029 | Sensitive | lineage4.3.3 | None | ERR11068559 | Sensitive | lineage4.8 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR22048306 | Sensitive | lineage4.8 | None | SRR22048553 | Sensitive | lineage4.8 | None | SRR22048488 | Sensitive | lineage4.8 | None | SRR22175227 | Pre-XDR-TB | lineage3 | None | ERR181940 | Sensitive | lineage3.1.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR176450 | Sensitive | lineage4.1.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | ERR161201 | Sensitive | lineage1.1.3.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR161045 | Sensitive | lineage4.3.4.2.1 | None | ERR161125 | Sensitive | lineage4.3.4 | None | ERR161170 | Sensitive | lineage4.3.4.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | ERR163988 | Sensitive | lineage4.1.2 | None | ERR4815517 | Other | lineage1.2.2.2 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | ERR1750944 | Other | lineage4.1.2 | za | ERR176547 | Sensitive | lineage4.6.1.1 | None | ERR1873463 | MDR-TB | lineage2.2.2 | None | ERR4814943 | Sensitive | lineage4.8 | None | ERR4815548 | Sensitive | lineage4.8 | None | ERR190388 | Sensitive | lineage4.9 | None | ERR2027285 | MDR-TB | lineage4.6.2.2 | None | ERR212082 | Sensitive | lineage4.9.1 | None | ERR4817352 | Sensitive | lineage4.9 | None | ERR212042 | HR-TB | lineage3.1.1 | None | SRR4034393 | MDR-TB | lineage4.1.2.1 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | ERR216949 | Sensitive | lineage4 | None | ERR216950 | Other | lineage1.1.3.2 | None | ERR216986 | Sensitive | lineage4.3.4.2.1 | None | ERR2179850 | Sensitive | lineage4 | None | ERR221583 | Sensitive | lineage4.1.2 | None | SRR4033203 | Sensitive | lineage4.9 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR2179737 | HR-TB | lineage4.2 | None | ERR221608 | Sensitive | lineage1.2.2.2 | None | ERR4815811 | HR-TB | lineage4.2.1.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SAMN02350437 | MDR-TB | lineage4.8 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | SRR4035998 | Sensitive | lineage4.4.1.1.1 | None | ERR4818655 | Other | lineage4.3.3 | None | ERR4818318 | Sensitive | lineage4.8 | None | ERR4818440 | Other | lineage6.3.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR2514135 | Other | lineage3 | gb | ERR4819622 | Other | lineage4.1.2.1 | None | ERR1023509 | Other | None | SRR5341462 | Pre-XDR-TB | lineage3.1.2.1 | None | ERR4820075 | Other | lineage4.1.2.1 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | ERR4821054 | Other | lineage3 | None | SRR5153236 | MDR-TB | lineage2.2.1 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | ERR4819453 | Other | lineage4.8 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4821057 | HR-TB | lineage4 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045655 | Other | lineage4.1.1.3.1 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045928 | Other | lineage4.9 | None | SRR6045759 | RR-TB | lineage2.2.1 | gb | SRR6044925 | Sensitive | lineage4.9 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR6046376 | Other | lineage3 | None | ERR279477 | Sensitive | lineage4.4.1.1.1 | None | SRR6046839 | Other | lineage4.9 | None | ERR4829508 | Sensitive | lineage4.8 | it | ERR4829817 | Sensitive | lineage4.3.3 | it | ERR502494 | Other | lineage5.1.1 | None | ERR11049370 | Sensitive | lineage4.8 | None | ERR502480 | Other | lineage5.1.1 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR6982053 | Sensitive | lineage4.9;lineage4.3.4.1 | None | ERR495008 | Sensitive | lineage4.4.1.1.1 | None | ERR323036 | HR-TB | None | ERR5087707 | Other | La1.8.1 | None | ERR5087486 | Other | La1.8.1 | None | ERR5087846 | Other | La1.8.1 | None | ERR5311093 | Other | La1.8.1 | None | ERR5087606 | Other | La1.8.1 | None | ERR5311076 | Other | La1.8.1 | None | SRR7131296 | Other | lineage4.3.3 | None | ERR5311088 | Other | La1.8.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | ERR036207 | Other | lineage4.9 | None | SRR8346061 | Pre-XDR-TB | lineage2.2.1 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1063873 | Sensitive | lineage4.3.4.2.1 | None | ERR1063847 | Sensitive | lineage3.1.1 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR1063890 | Sensitive | lineage3.1.1 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796559 | Other | lineage4.9 | None | ERR10796568 | Other | lineage4.9 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR10796630 | HR-TB | None | ERR10796599 | Other | lineage4 | None | ERR1082121 | Sensitive | lineage4.9 | None | ERR108424 | Sensitive | lineage4.8 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | ERR3283043 | Other | lineage4.9 | None | ERR1203078 | Sensitive | lineage4.6.2.2 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR1203071 | Sensitive | lineage4.8 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283051 | Other | lineage4.9 | None | ERR3801381 | Other | lineage6.1.3 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3797007 | Other | La1.8.1 | None | ERR4187636 | Other | La1.8.1 | None | ERR4187800 | Other | La1.8.1 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4187819 | Other | La1.8 | None | ERR4187869 | Other | La1.8.1 | None | ERR4188021 | Other | La1.8.1 | None | ERR4188187 | Other | La1.8.1 | None | ERR4187916 | Other | La1.8.1 | None | ERR4188160 | Other | La1.8.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4188254 | Other | La1.8.1 | None | ERR4188395 | Other | La1.8.1 | None | ERR4195683 | Sensitive | lineage4.8 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR4188381 | Other | La1.8.1 | None | ERR4195771 | Sensitive | lineage4.8 | None | ERR4769514 | Other | La1.3 | None | ERR473341 | Sensitive | lineage4.1.1.3 | None | ERR4769462 | Other | La1.3 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769470 | Sensitive | lineage4.9 | None | ERR4769482 | Sensitive | La1 | None | ERR4769516 | Other | La1.3 | None | ERR4769537 | Sensitive | lineage4.9 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4772210 | Other | La1.2 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769549 | Sensitive | lineage4.9 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4772228 | Other | La1.3 | None | ERR4772218 | Other | La1.2 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR718268 | Sensitive | lineage1.1.1 | None | ERR5917724 | MDR-TB | lineage2.2.1 | by | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6197034 | Other | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | ERR751729 | Other | lineage1.1.1 | None | ERR779662 | Sensitive | lineage3.1.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR7801226 | HR-TB | lineage4.3.3 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR9121182 | Sensitive | lineage4.8 | None | ERR9121337 | Sensitive | lineage4.8 | None | ERR987719 | HR-TB | lineage3 | None | ERR9787132 | Other | lineage6.1.3 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR11050165 | Sensitive | lineage4.8 | None | SRR1011488 | Other | lineage2.2.1 | None | SRR10482948 | Other | La1.8.1 | None | SRR1172717 | Other | lineage4.9 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062851 | MDR-TB | lineage4.8 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1172751 | HR-TB | lineage3.1.2.1 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173740 | Other | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR11972390 | MDR-TB | lineage2.2.1 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | ERR11050466 | Sensitive | lineage4.8 | None | SRR11972434 | Sensitive | lineage2.2.1 | None | SRR124452 | HR-TB | lineage2 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR124451 | HR-TB | None | SRR124453 | HR-TB | None | SRR12882699 | Sensitive | lineage1.1.2 | None |
|---|
