EBG00000313339 - n.2201T>C
Drug resistance types
245 Sensitive
21 RR-TB
45 HR-TB
64 MDR-TB
39 Pre-XDR-TB
1 XDR-TB
288 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 81 |
| lineage1.1.2 | 7 |
| La1.8.2 | 6 |
| La1.8.1 | 18 |
| La1.7.1 | 4 |
| lineage4.1.1 | 13 |
| lineage4.1.1.3.1 | 5 |
| lineage4.1.2.1 | 24 |
| lineage4.4.2 | 3 |
| lineage4.9.1 | 6 |
| lineage3.1.2 | 4 |
| 27 | |
| lineage4.3.2.1 | 12 |
| lineage4.8 | 32 |
| lineage4.1 | 2 |
| lineage2.2.1.1 | 11 |
| lineage4.9 | 96 |
| lineage4.3.4.1 | 7 |
| lineage4.3.3 | 23 |
| lineage4.3.4.2 | 12 |
| lineage1.1.3.2 | 7 |
| lineage1.2.1.2.1 | 2 |
| lineage3 | 36 |
| lineage4.1.1.3 | 8 |
| lineage4.5 | 4 |
| La2 | 1 |
| lineage3.1.1 | 12 |
| lineage6.2.3 | 1 |
| lineage4.3.4.2.1 | 37 |
| lineage4.6.1.1 | 10 |
| lineage4.3.4 | 3 |
| lineage1.2.2.2 | 6 |
| lineage4.1.2 | 15 |
| lineage1.2.1.1 | 1 |
| lineage4.4.1.1 | 11 |
| lineage4.6.1 | 2 |
| lineage4.4.1.1.1 | 7 |
| lineage4;lineage1.2.2.1 | 1 |
| lineage2.2.2 | 4 |
| lineage4 | 21 |
| lineage4.2.1 | 4 |
| lineage4.2.2.2 | 6 |
| lineage4.8.1 | 2 |
| lineage4.3.2.1;lineage3.1.1 | 1 |
| lineage4;lineage3 | 2 |
| lineage1.2.2.1 | 4 |
| lineage5.1.1 | 4 |
| lineage3.1.2.1 | 1 |
| lineage4.4 | 3 |
| lineage4.3.1.1 | 4 |
| La1.2 | 10 |
| lineage1.1.3.1 | 2 |
| lineage6.1.3 | 1 |
| lineage4.7 | 6 |
| lineage4.2.1.1 | 3 |
| lineage4.4.1.2 | 3 |
| lineage4.6.2.2 | 4 |
| lineage3.1.3 | 1 |
| lineage4.2.2.2;lineage3 | 2 |
| lineage3.1 | 1 |
| lineage4.2 | 1 |
| lineage3.1.2.2 | 3 |
| lineage4.1.1.2 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.3.2 | 2 |
| lineage2.2 | 3 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.9;lineage4.3.4.1 | 2 |
| lineage4.3 | 1 |
| lineage6.3.1 | 2 |
| lineage5.1.4 | 2 |
| lineage4.9;La1.8.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.6.1.2 | 4 |
| lineage4.8;lineage4.2.1 | 1 |
| lineage4.3.4.1;lineage1.1.2 | 1 |
| lineage4.9;lineage1.1 | 3 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage4.1.4 | 1 |
| lineage4;La1 | 1 |
| lineage4.9;La1.8 | 1 |
| La1 | 2 |
| La1.3 | 4 |
| lineage1.1.1 | 4 |
| lineage5.1.3 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.9;lineage2.2 | 2 |
| lineage4.6.1.2;lineage4.4.1.1 | 2 |
| La1.6 | 2 |
| lineage1.1 | 1 |
| lineage4.9;lineage4.4.2 | 1 |
| lineage2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 703 |
Geographic prevalence
Country level data for this variant is available for 39 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR15296950 | Other | La1.8.2 | None | SRR15368914 | MDR-TB | lineage2.2.1 | None | SRR15522850 | HR-TB | lineage1.1.2 | None | SRR1791940 | Other | La1.8.1 | None | SRR1792247 | Other | La1.7.1 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18213684 | Pre-XDR-TB | lineage4.1.1.3.1 | None | SRR19304095 | Other | lineage4.1.2.1 | None | SRR2101087 | Other | lineage4.4.2 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | SRR18213800 | Other | lineage3.1.2 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR19576436 | Sensitive | None | SRR2101628 | Other | lineage4.3.2.1 | None | SRR2101643 | Other | lineage2.2.1 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR2101661 | Sensitive | lineage4.1 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR21239946 | Other | lineage4.1.2.1 | None | SRR2101689 | Other | lineage4.3.4.1 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR21239825 | Sensitive | lineage4.3.4.2 | None | SRR21240012 | Sensitive | lineage4.1.2.1 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | SRR21686601 | Other | lineage1.2.1.2.1 | None | SRR21728339 | Other | lineage3 | None | SRR21728710 | Other | lineage4.1.1.3 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR22424905 | RR-TB | lineage4.9 | None | ERR1462610 | Other | La2 | None | ERR181906 | Sensitive | lineage3.1.1 | mw | ERR176771 | Sensitive | None | SRR21727754 | Sensitive | lineage6.2.3 | None | SRR22175227 | Pre-XDR-TB | lineage3 | None | ERR176756 | Sensitive | lineage4.9.1 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | ERR190332 | Sensitive | lineage4.3.4.1 | None | ERR176780 | Sensitive | lineage4.9 | None | SRR305201 | Sensitive | lineage4.9 | None | ERR176801 | Sensitive | lineage4.3.4.2.1 | mw | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | SRR3085281 | Pre-XDR-TB | lineage2.2.1 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR181940 | Sensitive | lineage3.1.1 | None | ERR1198988 | Sensitive | lineage4.6.1.1 | None | ERR1815548 | Other | La1.8.1 | None | ERR161125 | Sensitive | lineage4.3.4 | None | ERR161170 | Sensitive | lineage4.3.4.1 | None | ERR161184 | Sensitive | lineage4.3.4.2.1 | None | ERR181749 | Sensitive | lineage4.3.4.2.1 | None | ERR181750 | Sensitive | lineage1.1.3.2 | None | ERR176475 | Sensitive | lineage4.3.4.2.1 | None | ERR176482 | Sensitive | lineage4.3.4.2.1 | None | SRR3105736 | Other | lineage1.2.2.2 | None | ERR161045 | Sensitive | lineage4.3.4.2.1 | None | SAMN02419540 | Other | lineage2.2.1 | None | ERR161150 | Sensitive | lineage4.3.4.2.1 | None | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | ERR163988 | Sensitive | lineage4.1.2 | None | ERR176450 | Sensitive | lineage4.1.1 | None | ERR176513 | HR-TB | lineage4.3.4.2.1 | mw | ERR176547 | Sensitive | lineage4.6.1.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR3276005 | Other | lineage4.1.2.1 | nl | SRR3675276 | Other | lineage4.1.2.1 | gb | ERR176619 | Sensitive | lineage4.9 | None | SRR3675288 | Other | lineage3 | None | SRR1723567 | MDR-TB | lineage2.2.1 | cn | ERR176690 | Sensitive | lineage4.3.4.2.1 | mw | ERR2446456 | HR-TB | lineage4.4.1.1 | None | SRR3675286 | Other | lineage4.1.2.1 | gb | ERR553231 | Other | lineage4.1.2.1 | None | ERR176740 | HR-TB | None | ERR176739 | Sensitive | lineage4.4.1.1 | None | ERR190388 | Sensitive | lineage4.9 | None | ERR2228941 | Other | lineage4.8 | None | ERR192071 | Other | La1.8.1 | None | ERR2229033 | Other | lineage4.8 | None | ERR2229554 | Other | lineage4.8 | None | ERR216901 | Other | lineage3.1.1 | None | SRR3675557 | Other | lineage4.9 | None | ERR212015 | Sensitive | lineage4.8 | None | ERR1199039 | Sensitive | lineage4.6.1 | None | SAMN02585988 | MDR-TB | lineage4.4.1.1.1 | None | ERR212035 | Sensitive | lineage4.3.4.2.1 | None | ERR212082 | Sensitive | lineage4.9.1 | None | ERR212112 | Sensitive | lineage4;lineage1.2.2.1 | None | ERR212162 | Sensitive | lineage4.3.4.2.1 | None | ERR1873463 | MDR-TB | lineage2.2.2 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR212003 | Sensitive | lineage4.3.4.2.1 | None | ERR212042 | HR-TB | lineage3.1.1 | None | ERR212109 | Sensitive | lineage1.2.2.2 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | ERR216928 | Other | lineage4.9.1 | None | ERR216986 | Sensitive | lineage4.3.4.2.1 | None | ERR216949 | Sensitive | lineage4 | None | ERR1199021 | Other | lineage4.6.1.1 | None | ERR2229780 | Other | lineage4.9 | None | ERR2229332 | RR-TB | lineage4.8 | None | ERR2229336 | Other | lineage4.8 | None | ERR2229337 | Other | lineage4.8 | None | ERR2229358 | Other | lineage4.8 | None | ERR2229687 | Sensitive | lineage4.8 | dk | SAMN02628479 | MDR-TB | lineage4.2.1 | ir | SRR4033149 | Sensitive | lineage4.1.2 | None | SRR4033203 | Sensitive | lineage4.9 | None | ERR221563 | Sensitive | lineage1.1.3.2 | mw | ERR221550 | Sensitive | lineage4.3.4.2.1 | None | ERR1199007 | Sensitive | lineage4.6.1.1 | None | ERR221583 | Sensitive | lineage4.1.2 | None | ERR221608 | Sensitive | lineage1.2.2.2 | None | SAMN02380985 | Sensitive | lineage4.2.2.2 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228822 | Other | lineage4.9 | None | ERR4817853 | Other | lineage4.8.1 | None | ERR2513084 | Sensitive | lineage4.1.2.1 | gb | ERR1199064 | Other | lineage4.6.1.1 | ug | SAMN02585982 | MDR-TB | lineage4.3.3 | None | ERR2228859 | RR-TB | lineage4 | None | ERR2228874 | Other | lineage4 | None | ERR2228873 | Other | lineage4.8 | None | ERR2228888 | Other | lineage4.8 | None | SAMN02350437 | MDR-TB | lineage4.8 | None | ERR2179816 | Sensitive | lineage4 | None | ERR1199057 | Other | lineage4.6.1.1 | ug | SRR4034769 | Other | lineage4.1.1 | None | SRR5074711 | Sensitive | lineage4.3.3 | None | ERR2179695 | Sensitive | lineage4.5 | None | ERR245740 | Sensitive | lineage4.1.2 | None | SRR4037619 | Sensitive | lineage4.3.2.1 | None | ERR245764 | HR-TB | lineage3.1.1 | None | ERR1199001 | Sensitive | lineage4.6.1.1 | None | ERR245795 | Sensitive | lineage4.3.2.1;lineage3.1.1 | None | ERR245810 | Sensitive | lineage4.9.1 | None | ERR245801 | Other | lineage4.3.4.2.1 | None | ERR245846 | Sensitive | lineage2.2.1 | None | SAMN02350447 | Sensitive | lineage2.2.1.1 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR5007180 | Other | None | ERR245662 | Sensitive | lineage1.2.2.1 | None | ERR1199009 | Sensitive | lineage4.6.1.1 | None | ERR1199087 | Sensitive | lineage4.6.1.1 | None | ERR245716 | Sensitive | lineage2.2.1 | None | SRR5152936 | MDR-TB | lineage2.2.1 | None | SRR5149238 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153236 | MDR-TB | lineage2.2.1 | None | SRR5341375 | Other | lineage4.9 | None | ERR4820266 | RR-TB | lineage3 | None | SAMN02350450 | Sensitive | lineage1.2.2.1 | None | SRR5341460 | Other | lineage3 | None | SRR5341396 | Other | lineage4 | None | SAMN02350448 | Sensitive | lineage4.1.2 | za | ERR1082126 | Sensitive | lineage5.1.1 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR5341417 | Pre-XDR-TB | lineage3 | None | SAMN02584601 | Other | lineage2.2.1 | None | SAMN03246352 | Pre-XDR-TB | lineage2.2.1 | cn | SRR5341429 | HR-TB | lineage3.1.2.1 | None | SRR5341430 | Other | lineage3 | None | SRR5341295 | Sensitive | lineage1.2.2.2 | in | SRR5341306 | Pre-XDR-TB | lineage4.4 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341312 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02350409 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341317 | Pre-XDR-TB | lineage3 | None | ERR4820187 | Other | lineage4.3.3 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341467 | Other | lineage4 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6046087 | Other | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | SRR5486086 | Other | La1.2 | None | ERR2660441 | Sensitive | lineage1.1.3.1 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4821144 | Sensitive | lineage4.9 | None | SRR5526841 | MDR-TB | lineage2.2.1.1 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045553 | RR-TB | lineage4.9 | None | ERR4822143 | Sensitive | lineage4.7 | gb | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR2179797 | Other | lineage4.2.1.1 | cn | SRR6045616 | Other | lineage4.4.1.2 | gb | SRR6045565 | Other | lineage4.6.2.2 | None | SRR6045599 | Other | lineage4.8 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045614 | Other | lineage4.8 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6045705 | Other | lineage4.9 | None | SRR5818694 | RR-TB | lineage4.2.2.2;lineage3 | None | SRR6045805 | Other | lineage4.3.1.1 | None | SRR6045726 | Other | lineage3 | None | SRR6045763 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045778 | Other | lineage3.1 | None | SRR6044817 | Other | lineage3 | None | SRR6045843 | Other | lineage4.2.2.2 | None | SRR6044774 | Other | lineage3 | None | SRR6045855 | Sensitive | lineage3 | None | SRR6044787 | Other | lineage4.4 | None | SRR6044888 | Other | lineage4.1.1.3.1 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6045925 | Other | lineage4.2 | None | SRR6045899 | Other | lineage4.1.2.1 | gb | SRR6045909 | Other | lineage4.8 | None | SRR6044904 | Other | lineage3 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6044916 | Other | lineage4.1.1 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR6045986 | Other | lineage3 | None | SRR6044993 | Other | lineage3 | None | SRR6045017 | Other | lineage3.1.2.2 | None | SRR6045045 | Other | lineage2.2.1 | None | SRR6045064 | Other | lineage4.3.1.1 | None | SRR6044975 | Other | lineage3 | gb | SRR6045036 | Other | lineage4;lineage3 | None | SRR6045024 | Other | lineage4.1.1.2 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6045110 | Other | lineage3 | None | SRR6045124 | Other | lineage4.9 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045164 | Other | lineage4.1.2.1 | None | SRR6045178 | Other | lineage3 | None | SRR6046208 | Other | lineage4 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR6045248 | Other | lineage3.1.1 | None | SRR6045222 | Other | lineage4.1.2.1 | None | SRR6045232 | Other | lineage4.1.1.3 | gb | SRR6045267 | RR-TB | lineage4 | None | SRR6045289 | Other | None | SRR6046273 | Other | lineage3.1.2 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6045379 | Other | None | SRR6045399 | Other | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6046246 | Other | lineage3 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046291 | Other | lineage3 | None | SRR6046288 | Other | lineage3 | gb | ERR2851371 | Other | lineage4.9 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046456 | Other | lineage4.1.1.3.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046481 | Other | lineage4.1.1.3.1 | None | SRR6046541 | Other | lineage4.9 | None | SRR6046497 | Other | lineage4.9 | None | SRR6046517 | Other | lineage4.8 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046558 | Other | lineage3 | gb | SRR6046655 | Other | lineage4.1.2.1 | None | SRR6046607 | Other | lineage3 | None | SRR6046646 | Other | lineage4.7 | gb | SRR6046824 | HR-TB | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046729 | Other | None | SRR6046739 | Other | lineage1.1.2 | None | SRR6046752 | Sensitive | lineage4.2.2.2 | None | SRR6046818 | Other | lineage4.2.1 | gb | SRR6046815 | Other | lineage3 | None | SRR6389899 | Other | lineage4.1.2 | None | SRR6046874 | Other | lineage4.5 | None | SRR6397441 | Other | lineage4 | None | SRR6397727 | Other | lineage4.2.1.1 | None | SRR6397575 | Other | lineage4.3.4.2.1 | None | SRR6152979 | Other | lineage4.7 | None | SRR6397642 | RR-TB | None | SRR6152986 | Other | lineage2.2.1 | None | SRR6153036 | Other | None | ERR502472 | Other | lineage4.6.2.2 | None | SRR6397770 | Other | lineage4.7 | None | SRR6153231 | Sensitive | lineage4.4.1.2 | None | SRR6257097 | Pre-XDR-TB | lineage2.2.1 | ru | ERR3148546 | Other | lineage4.3.2 | None | SRR6480593 | Sensitive | lineage4.1.2.1 | None | SRR6982078 | Sensitive | None | ERR4832050 | MDR-TB | lineage2.2.1.1 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | ERR502482 | Sensitive | lineage4.9 | None | ERR502480 | Other | lineage5.1.1 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR502489 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR502492 | Sensitive | lineage4.9 | None | ERR502484 | Sensitive | lineage4.9 | None | ERR502485 | Sensitive | lineage4.9 | None | SRR6982410 | Other | lineage4.8.1 | None | ERR502498 | Sensitive | lineage4.9 | None | ERR502497 | Sensitive | lineage4.9 | None | ERR502494 | Other | lineage5.1.1 | None | SRR6856087 | Sensitive | lineage4 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6982115 | Sensitive | lineage4 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6982139 | Sensitive | lineage4.9 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR6982175 | Other | lineage1.1.3.2 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR6896340 | HR-TB | lineage4.4.1.1 | None | SRR6982170 | Sensitive | lineage4.1 | None | SRR6896348 | Sensitive | lineage4.1.2.1 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR6982196 | Sensitive | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6896539 | MDR-TB | lineage3 | None | SAMN02381042 | Pre-XDR-TB | lineage3 | ug | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982275 | Other | lineage2.2.1 | None | SRR6982313 | Sensitive | lineage4.3.4.2.1 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6797751 | MDR-TB | lineage2.2.1 | None | SRR6981912 | Sensitive | None | SRR6807688 | Pre-XDR-TB | lineage4.2.1 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6824357 | Pre-XDR-TB | lineage4.4.2 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6981941 | Sensitive | lineage4.3.4.2.1 | None | SRR6982371 | Sensitive | lineage4.1.1 | None | SRR6855718 | Sensitive | lineage4.8 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6982362 | Other | lineage4.3.2.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6982383 | Other | lineage4.3.2.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6824572 | MDR-TB | lineage2.2.1 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6982014 | Other | lineage4.1.1 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6855917 | Other | lineage4.8 | None | SRR6982026 | Sensitive | lineage4.3.3 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6982053 | Sensitive | lineage4.9;lineage4.3.4.1 | None | SRR6982057 | Pre-XDR-TB | lineage4.3 | None | SRR6982405 | Sensitive | None | SRR6982400 | Other | lineage2.2.1 | None | SRR6982070 | RR-TB | None | SRR6982075 | Sensitive | lineage3 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | SRR6982076 | Sensitive | lineage4.9 | None | ERR502530 | Other | lineage6.3.1 | gh | ERR323036 | HR-TB | None | ERR495008 | Sensitive | lineage4.4.1.1.1 | None | ERR502513 | Sensitive | lineage5.1.4 | gh | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | ERR5311080 | Other | La1.8.1 | None | SRR6982558 | Other | lineage4.3.4.2 | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | SRR7131096 | Other | lineage4.8 | None | SRR7131047 | MDR-TB | lineage4.3.3 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR8073606 | Other | La1.8.1 | None | SRR7131030 | Other | lineage4.1.2.1 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR7131185 | Other | lineage4.1.2.1 | None | SRR7131169 | Other | lineage4.1.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131201 | Other | lineage4.8 | None | SRR7131251 | Other | lineage2.2.1 | None | SRR7131220 | Other | lineage4.1.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR847801 | Pre-XDR-TB | lineage4.3.3 | None | SRR7131294 | Other | lineage6.3.1 | None | SRR833035 | MDR-TB | lineage4.1.1 | None | SRR7535044 | Pre-XDR-TB | lineage4.6.1.2 | None | SRR7645827 | Other | lineage4.2.1.1 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | SRR7645808 | HR-TB | lineage4.8;lineage4.2.1 | None | SRR7645900 | Sensitive | lineage4.8 | None | SRR7645834 | Other | lineage2.2.1 | None | ERR323041 | HR-TB | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR7755767 | Sensitive | lineage4.3.3 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | SRR9971235 | XDR-TB | lineage4.4.1.1.1 | None | ERR323068 | Sensitive | lineage4.9 | None | ERR016863 | Other | La1.8.1 | None | ERR019572 | HR-TB | lineage2.2.1 | ru | ERR036194 | Other | lineage4.6.1.2 | None | ERR027451 | Pre-XDR-TB | lineage2.2.1 | ru | ERR036237 | Sensitive | lineage4.3.4.2.1 | None | ERR036225 | Other | lineage4.3.4.2.1 | None | ERR036242 | Sensitive | lineage4.3.4.2.1 | None | ERR036191 | Sensitive | lineage4.9.1 | None | ERR036200 | Sensitive | lineage4.1.2 | None | ERR036215 | Other | lineage4.8 | None | ERR036233 | Sensitive | lineage4.3.4.1;lineage1.1.2 | None | ERR036247 | Sensitive | lineage4.3.4.2.1 | mw | ERR037501 | Sensitive | lineage4.3.4.2.1 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR037235 | Sensitive | lineage4.9 | None | ERR037485 | Sensitive | lineage4.3.4.2.1 | mw | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR037510 | Other | lineage1.1.3.2 | mw | ERR037506 | Sensitive | lineage4.3.4.2.1 | None | ERR037513 | Sensitive | lineage4.3.4.2.1 | None | ERR037529 | Other | lineage4.3.4.2.1 | None | ERR037535 | Sensitive | lineage4.3.4.2.1 | None | ERR1034692 | Other | lineage1.2.1.2.1 | None | ERR1023527 | RR-TB | lineage4 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034687 | Sensitive | lineage3 | None | ERR1034765 | HR-TB | lineage4.3.3 | None | ERR1063855 | Other | lineage4 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR1063882 | Sensitive | lineage4.3.4.2 | None | ERR1063873 | Sensitive | lineage4.3.4.2.1 | None | ERR10796592 | Other | lineage4 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796597 | Other | lineage4 | None | ERR10796621 | Other | lineage4.8 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR1144989 | Sensitive | lineage4.8 | None | ERR10796630 | HR-TB | None | ERR10796631 | Other | lineage4.3.4 | None | ERR1082121 | Sensitive | lineage4.9 | None | ERR108424 | Sensitive | lineage4.8 | None | ERR10796627 | Other | lineage4 | None | ERR108476 | Sensitive | lineage4.1.2.1 | None | ERR3261351 | Other | lineage4.9 | None | ERR126603 | Sensitive | lineage4.3.3 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | ERR144568 | Pre-XDR-TB | None | ERR3261389 | Other | lineage4.9 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR3283028 | Other | None | ERR3261359 | Other | lineage4.9 | None | ERR3324329 | HR-TB | lineage4.1.1.3 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR3324375 | Other | lineage1.1.3.2 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | ERR3439225 | Other | La1.8.1 | None | ERR4188330 | Other | La1.8.1 | None | ERR3439229 | Other | La1.8.1 | None | ERR3439268 | Sensitive | lineage4.9 | None | ERR3439285 | Sensitive | lineage4.9 | None | ERR3470682 | Other | lineage3 | None | ERR3797043 | HR-TB | None | ERR4132447 | HR-TB | lineage4 | None | ERR4187641 | Other | lineage4;La1 | None | ERR4187995 | Other | La1.8.1 | None | ERR4188021 | Other | La1.8.1 | None | ERR4188035 | Other | La1.8.1 | None | ERR4188255 | Other | lineage4.9;La1.8 | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR3806453 | Other | lineage4.3.4.2 | None | ERR4188010 | Other | La1.8.1 | None | ERR4188158 | Other | lineage4.9 | None | ERR4188396 | Sensitive | La1 | None | ERR4188372 | RR-TB | La1.8.1 | None | ERR4188395 | Other | La1.8.1 | None | ERR4188375 | Sensitive | lineage4.9 | None | ERR4188381 | Other | La1.8.1 | None | ERR4627369 | Other | La1.8.1 | None | ERR4450956 | Other | La1.7.1 | None | ERR4596929 | MDR-TB | lineage4.2.2.2;lineage3 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR473298 | Sensitive | lineage4.6.2.2 | None | ERR473341 | Sensitive | lineage4.1.1.3 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473304 | Sensitive | lineage2.2.1 | None | ERR4769424 | Sensitive | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769429 | Other | lineage4.9 | None | ERR4769428 | Other | La1.3 | None | ERR4769478 | Other | La1.2 | None | ERR4769462 | Other | La1.3 | None | ERR4769470 | Sensitive | lineage4.9 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769512 | Sensitive | lineage4.9 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR4769482 | Sensitive | La1 | None | ERR4769505 | Other | lineage4.9 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR4769537 | Sensitive | lineage4.9 | None | ERR4769549 | Sensitive | lineage4.9 | None | ERR4769546 | Other | La1.3 | None | ERR4772207 | Other | La1.3 | None | ERR4772210 | Other | La1.2 | None | ERR5865119 | MDR-TB | lineage2.2.1 | None | ERR4772206 | Other | La1.2 | None | ERR5865118 | MDR-TB | lineage2.2.1 | None | ERR5987345 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865343 | MDR-TB | lineage2.2.1 | None | ERR5987396 | MDR-TB | lineage4.3.2 | None | ERR6149874 | Other | La1.8.2 | None | ERR6140651 | Other | La1.8.2 | None | ERR6149870 | Other | La1.8.2 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR6140667 | Other | La1.8.2 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR6149876 | Other | La1.8.2 | None | ERR6197040 | Other | lineage4.9 | None | ERR6197041 | MDR-TB | lineage4.3.4.2 | None | ERR6197044 | RR-TB | lineage4.9 | None | ERR6201832 | Other | La1.2 | None | ERR6201802 | Other | La1.2 | None | ERR6198389 | Other | La1.2 | None | ERR6201843 | Other | La1.2 | None | ERR6397161 | Other | lineage4.2.2.2 | None | ERR6362056 | MDR-TB | lineage4.3.2.1 | None | ERR6397155 | HR-TB | lineage3 | None | ERR6201910 | Other | La1.2 | None | ERR702399 | Sensitive | lineage5.1.1 | gh | ERR6866186 | Sensitive | lineage4.8 | None | ERR736808 | Sensitive | lineage2.2.1 | None | ERR702423 | Sensitive | lineage5.1.4 | None | ERR718268 | Sensitive | lineage1.1.1 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR736816 | Other | lineage4.9 | None | ERR736867 | HR-TB | None | ERR736818 | Sensitive | lineage4.3.3 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR751310 | Sensitive | lineage5.1.3 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR751569 | MDR-TB | lineage4.3.3 | None | ERR751729 | Other | lineage1.1.1 | None | ERR752034 | Sensitive | lineage2.2.1 | None | ERR7737918 | MDR-TB | lineage4.2.2.1 | None | ERR752033 | Sensitive | lineage2.2.1 | th | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | ERR7737736 | MDR-TB | lineage2.2.1 | None | ERR773795 | Sensitive | lineage4.3.4.2 | None | ERR779661 | Sensitive | lineage4.3.4.2.1 | None | ERR775806 | Sensitive | lineage4.4 | None | ERR779680 | Sensitive | lineage4.3.4.2.1 | None | ERR7821131 | MDR-TB | lineage4.4.1.1.1 | None | ERR7801177 | Other | lineage4.3.4.2.1 | None | ERR7801178 | Other | lineage4.3.4.2.1 | None | ERR9117699 | Other | lineage4.1.2.1 | None | ERR7821140 | Sensitive | lineage2.2.1.1 | None | ERR7911339 | MDR-TB | lineage4.3.4.2 | pe | ERR9117714 | Other | lineage3.1.2 | None | ERR9117730 | Other | lineage1.1.2 | None | ERR9117728 | Other | lineage3 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR987695 | HR-TB | lineage4.3.4.2 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR9117806 | Other | lineage4.8 | None | ERR9117814 | Sensitive | lineage3 | None | ERR9786844 | Other | lineage4.3.4.2 | None | ERR9117750 | HR-TB | lineage4.5 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR987704 | HR-TB | lineage4.6.1.2 | None | ERR987757 | MDR-TB | lineage4.6.1.2 | None | ERR987734 | HR-TB | lineage4.3.4.2 | None | ERR987719 | HR-TB | lineage3 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1011450 | Pre-XDR-TB | lineage2.2.1 | None | ERR987766 | HR-TB | lineage4.3.3 | None | ERR9992658 | HR-TB | lineage2.2.1 | None | SRR1011480 | MDR-TB | lineage4.8 | None | SRR1011488 | Other | lineage2.2.1 | None | SRR1011489 | Sensitive | lineage2.2.1.1 | None | SRR1011492 | Sensitive | lineage1.2.2.1 | None | SRR1019130 | Sensitive | lineage4.3.2.1 | None | SRR1019127 | Other | lineage4.9;lineage2.2 | None | SRR10315486 | MDR-TB | lineage2.2.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | SRR1049030 | Pre-XDR-TB | lineage4.9 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR10482948 | Other | La1.8.1 | None | SRR1049568 | Sensitive | lineage4.2.2.2 | None | SRR1049564 | HR-TB | lineage4.6.1.2;lineage4.4.1.1 | None | SRR1049031 | HR-TB | lineage4.9 | None | SRR1049569 | Sensitive | lineage4.2.2.2 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1062820 | Pre-XDR-TB | lineage2.2.1 | None | SRR1062851 | MDR-TB | lineage4.8 | None | SRR1062861 | Sensitive | lineage4.1.2 | None | SRR1062863 | Sensitive | lineage1.2.2.1 | None | SRR1062860 | Sensitive | lineage2.2.1.1 | None | SRR10869051 | HR-TB | lineage2.2.1 | None | SRR1062932 | Pre-XDR-TB | lineage3 | None | SRR10851730 | Other | lineage4.3.3 | None | SRR10869203 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10869160 | Sensitive | lineage2.2.1.1 | None | SRR10993953 | Other | La1.6 | None | SRR1140625 | Pre-XDR-TB | lineage3 | None | SRR10993957 | Other | La1.6 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR11349188 | MDR-TB | lineage4.1.2.1 | None | SRR1140691 | HR-TB | lineage4.6.1.2;lineage4.4.1.1 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1162501 | Other | lineage2.2.1 | None | SRR1140942 | Other | None | SRR1159158 | Other | lineage2.2.1 | None | SRR1172753 | MDR-TB | lineage4.4.1.1.1 | None | SRR1166110 | Other | lineage2.2.1 | None | SRR1169017 | Other | lineage2.2.1 | None | SRR1172177 | MDR-TB | lineage4.1.1 | None | SRR1169145 | MDR-TB | lineage4.1.1 | None | SRR1173190 | Sensitive | lineage4.9 | None | SRR1172808 | Other | lineage4.9 | None | SRR1173040 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173113 | RR-TB | lineage4.3.4 | None | SRR1172816 | MDR-TB | lineage4.3.3 | None | SRR1173025 | Other | lineage4.9 | None | SRR1173074 | Other | lineage4.9 | None | SRR1173139 | Sensitive | lineage4.9 | None | SRR1173416 | Other | lineage4.9 | None | SRR1173384 | Other | lineage4 | None | SRR1173521 | HR-TB | lineage4.9 | None | SRR1173766 | Sensitive | lineage4.9 | None | SRR1173705 | Other | lineage4.9 | None | SRR1173717 | MDR-TB | lineage4.6.1 | None | SRR1173848 | Pre-XDR-TB | lineage2.2.2 | None | SRR1175304 | MDR-TB | lineage4.3.3 | None | SRR1175073 | Other | lineage4.9 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR1180243 | MDR-TB | lineage4.2.1 | None | SRR1180252 | Other | lineage4.9 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR1180982 | Other | lineage2.2.1 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR1181136 | Sensitive | lineage2.2 | None | SRR1181250 | Other | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1183080 | RR-TB | lineage4.9 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR1196582 | Other | lineage4.9 | None | SRR1183958 | Other | lineage2.2.1 | None | SRR1184383 | Other | lineage4.9 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196557 | HR-TB | lineage4.9;lineage2.2 | None | SRR1184379 | Other | lineage4 | None | SRR11972175 | MDR-TB | lineage2.2.1 | None | SRR11972323 | RR-TB | lineage1.1.3.2 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11972350 | MDR-TB | lineage2.2.1 | None | SRR11972383 | Sensitive | lineage1.1.2 | None | SRR11972435 | Sensitive | lineage1.1.1 | None | SRR11972438 | HR-TB | lineage1.1.1 | None | SRR12199465 | Sensitive | lineage2.2.1.1 | None | SRR12199400 | HR-TB | lineage4.9;lineage1.1 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR12199428 | Sensitive | lineage4.9;lineage1.1 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR12199472 | Sensitive | lineage1.1 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR13199738 | Other | La1.7.1 | None | SRR124452 | HR-TB | lineage2 | None | SRR12882020 | Other | lineage3.1.1 | None | SRR12882699 | Sensitive | lineage1.1.2 | None | SRR12931719 | Other | lineage4.3.4.2 | None | SRR124451 | HR-TB | None | SRR124453 | HR-TB | None | SRR13199734 | Other | La1.2 | None | SRR13986566 | Other | La1.7.1 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | SRR13628039 | Sensitive | lineage4.9 | None | SRR13591410 | Other | lineage4.9;lineage4.3.4.1 | None | SRR13861274 | RR-TB | lineage4.9 | None | SRR13861597 | Other | lineage4.9 | None |
|---|
