EBG00000313339 - n.1882A>T


Drug resistance types
89 Sensitive 26 RR-TB 36 HR-TB 38 MDR-TB 19 Pre-XDR-TB 0 XDR-TB 101 Other
lineage Counts
lineage Count
lineage4.2.1 6
lineage2.2.1 36
La1.7;lineage4.9 1
lineage4.9 136
lineage4.3.4.2.1 10
lineage4.4.1.1 3
lineage4.8 8
lineage4.1.2.1;lineage4.4.1.1 1
lineage3 7
La1.8.1 2
La1.2 1
La1.7.X-unk4 1
lineage2.2.1;lineage4.9 3
lineage2.2.1.1 1
lineage4.6.1.2 4
lineage3.1.1 2
lineage4.9.1 1
lineage4.6.1.1 3
lineage4.1.1.3 7
lineage4.3.3 8
lineage4.4.1.1.1 3
lineage4.1.2.1;lineage4.4.1 1
lineage3.1.2.1 2
La1.6 1
lineage4.1.2.1 6
La1.3 3
lineage4.3.3;lineage4.8 2
lineage2.2;lineage4.9 1
lineage4.1.3 1
lineage4.3.2.1 3
lineage1.1.3.2 1
lineage2.2.1;lineage4 1
lineage4.5 1
La2 1
lineage2.2.2 2
lineage1.2.2.2 1
lineage4.2.1.1 1
lineage4.2;lineage4.9 1
lineage1.1.2 1
lineage1.1.3.1 1
lineage4.3.3;lineage4.9 1
lineage3.1;lineage4 1
lineage3.1;lineage4.6.1.1 1
lineage4.3.4.1 2
lineage4.1.2 1
lineage4.2.2.2 2
lineage2.2;lineage4 1
lineage4.4.2 1
lineage4.3;lineage4.9 1
lineage4.1.2.1;lineage4.9 1
lineage2.2.1;lineage3 1
lineage3.1.1;lineage4.9 1
lineage2;lineage4.9 1
lineage4.4.1.2 1
lineage4.3.2 1
lineage3.1.1;lineage4.6.1.1 1
lineage4.7 2
1
lineage4.1.1.3;lineage4.9 1
lineage4.8.1 2
lineage1.2.1.1 1
lineage6.1.3 1
lineage4.1.1.1 2
lineage4 3
lineage2.2;lineage3 1
La1;lineage4.9 1
lineage3;lineage4 1
spoligotype Counts
spoligotype Count
None 309
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1166181 Sensitive lineage4.2.1 None
SRR1173343 Pre-XDR-TB lineage2.2.1 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR1180250 Other lineage4.9 None
ERR323037 Other lineage4.9 None
ERR212114 Other lineage4.3.4.2.1 None
SRR11342698 RR-TB lineage4.4.1.1 None
SRR7131053 Other lineage2.2.1 None
ERR502474 RR-TB lineage4.9 None
SRR1184308 RR-TB lineage4.9 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR1172885 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
SRR1181569 Other lineage4.9 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR867567 RR-TB lineage3 None
ERR4819462 Sensitive lineage4.9 None
ERR6359069 HR-TB lineage4.9 None
ERR3468488 Other La1.8.1 None
ERR2851356 Sensitive lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4769418 Other La1.2 None
ERR3445487 Other La1.7.X-unk4 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR1181422 Other lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1183339 Other lineage4.9 None
SRR1181147 Other lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR1180047 Other lineage4.9 None
SRR1180687 Other lineage4.9 None
ERR4819383 RR-TB lineage4.9 None
ERR972801 RR-TB lineage2.2.1.1 None
ERR736850 Sensitive lineage4.9 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1173310 Other lineage3.1.1 None
ERR405216 Sensitive lineage3.1.1 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
ERR037504 Other lineage4.9.1 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
ERR473323 HR-TB lineage4.9 None
SRR1173704 Sensitive lineage4.6.1.1 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
SRR1196478 Other lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
SRR12708419 Other lineage4.3.3 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR1173766 Sensitive lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR108125 RR-TB lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
SRR1173705 Other lineage4.9 None
ERR4820798 Other lineage3.1.2.1 gb
ERR405190 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR10993951 RR-TB La1.6 None
SRR1181403 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR4815783 Other lineage4.1.2.1 gb
ERR473311 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1180440 Other lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
ERR4769408 Other La1.3 None
SRR1180420 Sensitive lineage4.9 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
SRR11462861 Other La1.8.1 None
ERR4817667 HR-TB lineage4.8 None
SRR6046141 Other lineage4.9 None
SRR1173190 Sensitive lineage4.9 None
SRR1183684 Other lineage4.9 None
SRR1182954 Other lineage4.9 None
SRR1173865 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
ERR4815550 Other lineage2.2;lineage4.9 None
SRR5341365 Pre-XDR-TB lineage3 None
ERR067712 Sensitive lineage4.9 None
ERR216965 Sensitive lineage4.9 None
ERR4817434 Other lineage3 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR11342671 RR-TB lineage4.1.3 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR4821962 Other lineage4.1.1.3 gb
ERR176781 Sensitive lineage1.1.3.2 None
SRR1181351 Sensitive lineage4.9 None
ERR4769514 Other La1.3 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR1180312 Sensitive lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
ERR4816548 HR-TB lineage4.5 None
SRR1181283 Sensitive lineage4.9 None
SRR13888750 Other La2 None
ERR4821811 Sensitive lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
SRR1175052 HR-TB lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR405215 Sensitive lineage2.2.1 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
ERR867570 RR-TB lineage4.9 None
ERR164004 Sensitive lineage4.9 None
SRR1175474 Other lineage4.9 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR485006 HR-TB lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
ERR4814976 Other lineage4.9 None
SRR11342646 HR-TB lineage3 None
SRR7755733 MDR-TB lineage4.3.3 None
SRR1173764 Sensitive lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
SRR1180319 Sensitive lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR7646056 Other lineage4.2.1.1 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR1183054 Sensitive lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR1180977 Sensitive lineage4.9 None
SRR1168955 Sensitive lineage4.2;lineage4.9 None
ERR1873445 MDR-TB lineage2.2.1 None
SRR1181299 Other lineage4.9 None
SRR1172717 Sensitive lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR12708409 HR-TB lineage4.3.3 None
ERR867540 MDR-TB lineage2.2.1 None
SRR1173281 Other lineage3 None
ERR473340 Sensitive lineage1.1.2 None
ERR2124090 MDR-TB lineage2.2.1 None
SRR1173170 Other lineage4.9 None
SRR1174277 HR-TB lineage2.2.1 None
ERR4821616 Other lineage1.1.3.1 None
SRR1173719 Other lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
SRR1173508 Sensitive lineage4.9 None
SRR1183531 Other lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
ERR4820484 Sensitive lineage4.8 None
SRR1180024 Other lineage4.9 None
ERR10796598 Other lineage4.9 None
ERR405222 Sensitive lineage3.1;lineage4 None
SRR12708392 Other lineage2.2.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR1180087 Other lineage4.9 None
ERR4769555 Sensitive La1.3 None
SRR1173565 MDR-TB lineage3.1;lineage4.6.1.1 None
SRR1173185 Other lineage4.9 None
SRR1183152 Other lineage4.9 None
SRR1173770 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR1181580 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
ERR1034647 MDR-TB lineage4.1.1.3 None
SRR1180410 Sensitive lineage4.9 None
SRR1183170 Other lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
ERR2515230 Sensitive lineage4.8 None
ERR970455 RR-TB lineage4.1.2 None
SRR9971114 Other lineage2.2.1 None
SRR12708418 HR-TB lineage2.2.1 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
ERR405191 Sensitive lineage4.9 None
SRR1183438 Other lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR502481 RR-TB lineage4.9 None
ERR502942 Sensitive lineage4.9 None
ERR323057 Sensitive lineage4.9 None
SRR7755655 Other lineage4.1.2.1 None
ERR2124088 Other lineage4.4.1.1 None
SRR1173385 Sensitive lineage4.9 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR13591377 Sensitive lineage4.1.1.3 None
SRR16156832 RR-TB lineage2.2;lineage4 None
SRR5153091 HR-TB lineage4.3.3 None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
ERR9119101 Sensitive lineage4.3.3 None
ERR4818536 Other lineage4.9 None
SAMN02567685 Pre-XDR-TB lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR12708415 HR-TB lineage2.2.1 None
SRR1180686 Other lineage4.9 None
SRR1173768 Sensitive lineage4.9 None
SRR20969542 Other lineage4.4.2 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR036207 Other lineage4.3;lineage4.9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR4816470 HR-TB lineage3 None
SRR1182900 Sensitive lineage4.9 None
SRR1182878 Other lineage4.9 None
SRR1181264 Sensitive lineage4.9 None
ERR867572 Other lineage4.9 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR1173800 Pre-XDR-TB lineage2.2.1;lineage3 None
SRR7645899 Other lineage2.2.1 None
ERR4814639 HR-TB lineage4.9 None
ERR4814994 HR-TB lineage2.2.1 gb
SRR4034391 MDR-TB lineage4.1.2.1 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR4816417 Other lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR405217 Sensitive lineage2.2.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
SRR9971112 HR-TB lineage2.2.1 None
SRR1173421 Other lineage4.9 None
SRR7535047 RR-TB lineage4.6.1.1 None
ERR867538 Other lineage4.2.2.2 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR10796589 Other lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1184329 Other lineage4.9 None
SRR13591376 Sensitive lineage4.3.2 None
ERR502470 RR-TB lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR867571 Other lineage4.9 None
SRR1062919 HR-TB lineage2.2.1 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR736825 Sensitive lineage4.9 None
SRR1173293 Other lineage3.1.1;lineage4.6.1.1 None
ERR4815815 Sensitive lineage4.9 None
SRR1183281 Other lineage4.9 None
SRR1173833 Other lineage4.9 None
ERR473334 HR-TB lineage4.9 None
SRR7496523 Other lineage4.7 None
ERR867569 Other lineage4.9 None
ERR4796577 HR-TB None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1180406 Sensitive lineage4.9 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR7645971 Other lineage2.2.1 None
ERR773806 Sensitive lineage2.2.1 None
ERR9787336 RR-TB lineage6.1.3 None
SRR1180375 Sensitive lineage4.9 None
SRR1181256 Other lineage4.9 None
SRR7131123 Other lineage4.8 None
SRR11342669 Other lineage4.8 None
ERR4815022 Other lineage3.1.2.1 None
SRR6045832 Other lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1140724 Other lineage2.2.1 None
ERR4816322 Other lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR176741 Other lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
SAMN02567670 Sensitive lineage4.6.1.1 None
SRR1183190 Other lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
ERR867573 Other lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR5908229 Sensitive lineage4.3.3 None
ERR1034791 MDR-TB lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR773804 Sensitive lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR2229198 Sensitive lineage4.8 None
ERR4798823 HR-TB lineage4 None
SRR1140736 Other lineage4.1.2.1 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1181349 Sensitive lineage4 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR6359066 HR-TB lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR1173380 Pre-XDR-TB lineage2.2;lineage3 None
SRR7645928 Other lineage4.7 None
SRR7496471 Sensitive lineage4 None
SRR1173139 Sensitive lineage4.9 None
ERR502473 RR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
SRR9971270 RR-TB lineage2.2.1 None
ERR4769550 Sensitive La1;lineage4.9 None
ERR323067 Sensitive lineage4.3.4.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR1173269 Sensitive lineage4.9 None
SRR1173740 Other lineage3;lineage4 None