lineage | Count |
---|---|
lineage4.9 | 18 |
lineage4.3.4.2.1 | 1 |
lineage6.1.3 | 1 |
lineage4.3.3 | 3 |
lineage4.1.1.3 | 2 |
lineage2.1;lineage4.9 | 1 |
lineage3 | 6 |
lineage2.2.1 | 8 |
lineage2.2.2 | 1 |
lineage4.3.2.1 | 3 |
lineage3.1.2.1 | 1 |
lineage2;lineage4 | 1 |
lineage1.2.2.2 | 1 |
lineage4.9;lineage7 | 1 |
lineage4.7 | 1 |
lineage2.1;lineage4.9;lineage7 | 1 |
lineage4 | 1 |
spoligotype | Count |
---|---|
None | 51 |
ID | Drug resistance | Lineage | Country iso2 | SRR1175052 | HR-TB | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR3675582 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4814976 | Other | lineage4.9 | None | ERR867566 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR12708419 | Other | lineage4.3.3 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR7496523 | Other | lineage4.7 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR3275190 | Other | lineage3 | nl | ERR387051 | Other | lineage4.9 | None | ERR2513259 | Other | lineage3 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4816470 | HR-TB | lineage3 | None | SRR7496471 | Sensitive | lineage4 | None | SRR1184308 | Sensitive | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None |
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