Rv1630 - c.453G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
21 Sensitive
58 RR-TB
11 HR-TB
33 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
51 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 37 |
| lineage4.9 | 40 |
| La1.3 | 1 |
| lineage5.1.1 | 2 |
| lineage2.2.1 | 39 |
| lineage1.1.2 | 1 |
| lineage4.2.1 | 3 |
| lineage4.4.1.1 | 3 |
| lineage4.6.1.2 | 4 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage4.3.2.1 | 2 |
| lineage4.1.2.1 | 3 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.1.1.3 | 5 |
| La1.8.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.6.2.2 | 2 |
| 1 | |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.8.2 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4 | 1 |
| lineage4.4.2 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.3 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.2.2.2 | 2 |
| lineage2.2.2 | 4 |
| lineage3.1.2.1 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.2 | 1 |
| lineage4.8;lineage4.9 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.3 | 1 |
| lineage4.8.1 | 2 |
| lineage3 | 1 |
| lineage3.1.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 186 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR978762 | Other | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR4769436 | Other | La1.3 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR978760 | RR-TB | lineage4.8 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR6046250 | Other | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR2228900 | Other | lineage4.8 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7236330 | Other | La1.8.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR26159066 | Sensitive | lineage4.9 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978746 | RR-TB | lineage4.8 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR978735 | Other | lineage4.8 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR4817069 | RR-TB | None | ERR978757 | RR-TB | lineage4.8 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR978756 | Other | lineage4.8 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR978752 | Other | lineage4.8 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR16156775 | Other | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR4821655 | HR-TB | lineage4.9 | None | ERR4829333 | Other | lineage4 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1;lineage4 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002945 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | ERR978754 | RR-TB | lineage4.8 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR1181256 | Other | lineage4.9 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR978761 | Other | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | SRR1180440 | Other | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4821143 | Other | lineage4.9 | None | ERR978726 | RR-TB | lineage4.8 | None | SRR7069800 | Other | lineage3.1.2.1 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4816852 | Other | lineage4.9 | None | ERR4821811 | Sensitive | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR2228890 | Other | lineage4.8;lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11444077 | Sensitive | lineage4.6.2.2 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR4814976 | Other | lineage4.9 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | ERR502517 | Other | lineage5.1.1 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR6044952 | Other | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR978750 | RR-TB | lineage4.8 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4769554 | RR-TB | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR6358979 | Other | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None |
|---|
