EBG00000313339 - n.2046A>T


Drug resistance types
3 Sensitive 20 RR-TB 5 HR-TB 16 MDR-TB 13 Pre-XDR-TB 0 XDR-TB 56 Other
lineage Counts
lineage Count
lineage4.9 29
lineage4.1.2.1 8
lineage2.2.1 10
lineage3 14
lineage4.3.3 2
lineage4.6.1.1 3
lineage4.3.2.1 1
lineage2.2.2 1
6
La1.7.X-unk4 1
lineage4.3.4.1 1
La1.8.1 1
lineage4.9;La1.3 1
La1.2 1
lineage4.4.1.1 2
La1.3 1
lineage1.1.3.3 1
lineage3.1.1 1
lineage4 3
lineage3.1.3 1
lineage1.1.1.1 1
lineage4.3.4.2.1 4
lineage4.4.1.1;lineage4.1.2.1 1
La1.6 1
La1.4 1
lineage2.2.1.1 1
lineage1.2.1.2 1
lineage4.4.2 1
lineage1.1.1 2
lineage4.1.1.3 2
lineage4.2.2.2 1
lineage4.8 3
lineage4.1.3 1
lineage3.1.2.1 1
lineage1.1.2 1
lineage4.6.2.2 1
lineage4.5 1
lineage4.3.4.2 1
spoligotype Counts
spoligotype Count
None 113
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4821172 RR-TB lineage4.9 None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4821342 Sensitive lineage2.2.1 None
SRR6046737 Other lineage4.9 None
SRR6046376 Other lineage3 None
SRR6046839 Other lineage4.9 None
SRR6832644 Other lineage4.3.3 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR502479 RR-TB lineage4.9 None
ERR2503533 Other lineage4.1.2.1 fi
SRR7535047 RR-TB lineage4.6.1.1 None
ERR10796559 Other lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR9971168 Other lineage4.3.2.1 None
DRR185024 Other lineage2.2.2 None
ERR1023502 MDR-TB lineage2.2.1 None
DRR184629 Other lineage2.2.1 None
DRR184932 Other lineage2.2.1 None
ERR10796630 HR-TB None
ERR10796574 Other lineage4.9 None
ERR10796594 Other lineage4.9 None
ERR3445487 Other La1.7.X-unk4 None
ERR3324331 MDR-TB lineage4.3.4.1 None
ERR3439489 RR-TB La1.8.1 None
ERR4457829 MDR-TB lineage4.1.2.1 None
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR4132460 MDR-TB lineage2.2.1 None
ERR4769419 Other lineage4.9 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769418 Other La1.2 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR4769495 Other La1.3 None
ERR4769508 RR-TB lineage4.9 None
ERR4798769 Other lineage1.1.3.3 None
ERR4769530 RR-TB lineage4.9 None
ERR9285979 RR-TB lineage3.1.1 None
ERR4811708 HR-TB lineage4 None
ERR9117826 Other lineage3.1.3 None
ERR6197040 Other lineage4.9 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR9117709 HR-TB None
SRR1049672 Other lineage3 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1062928 RR-TB lineage4 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR1173170 Other lineage4.9 None
SRR10993951 RR-TB La1.6 None
SRR1140736 RR-TB None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1140716 Pre-XDR-TB lineage3 None
SRR1173740 Other None
SRR1173281 RR-TB lineage3 None
SRR1173770 Other lineage4.9 None
SRR21240055 Other lineage4.1.2.1 None
SRR16156775 Other lineage4.9 None
SRR16278274 Other La1.4 None
SRR18909918 Other lineage2.2.1.1 None
SRR20969475 Other lineage1.2.1.2 None
SRR20969542 Other lineage4.4.2 None
SRR1173834 Other lineage4.6.1.1 None
SRR11972447 Pre-XDR-TB lineage2.2.1 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR15315797 RR-TB lineage2.2.1 None
SRR18003031 HR-TB lineage2.2.1 None
SRR21658550 Other lineage1.1.1 None
SRR21677894 Other lineage4.1.1.3 None
SRR22175229 MDR-TB lineage4.2.2.2 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
ERR4815310 Other None
ERR4813263 MDR-TB lineage4.8 None
ERR4815490 Other lineage3 None
ERR4814976 Other lineage4.9 None
ERR4815550 Other lineage4 None
ERR4816198 Sensitive lineage4.1.3 None
ERR4815022 Other lineage3.1.2.1 None
ERR4816397 Other lineage1.1.2 None
ERR4816322 Other lineage4.9 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4816417 Other lineage4.9 None
ERR4816493 Other lineage4.1.2.1 None
ERR4816548 MDR-TB lineage4.5 None
ERR2229786 Sensitive lineage4.8 None
ERR4817434 Other lineage3 None
ERR4816833 Other lineage4.1.1.3 None
ERR4818904 Other lineage4.8 None
ERR4816852 Other lineage4.9 None
ERR4816868 Other lineage4.4.1.1 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR3275190 Other lineage3 nl
ERR4817915 RR-TB lineage4.9 None
ERR4818831 Other lineage3 None
ERR4818952 Other lineage3 None
ERR4817554 Other lineage1.1.1 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR4819383 RR-TB lineage4.9 None
ERR4820265 Other lineage4.1.2.1 None
ERR1023509 Other None
ERR4819863 RR-TB lineage4.9 None
ERR4821143 RR-TB lineage4.9 None
SAMN02567682 Other lineage4.6.1.1 ug
ERR4820030 Other lineage4.9 None
ERR2446509 Other lineage3 nl
ERR4821054 Other lineage3 None