EBG00000313339 - n.1874C>T
Drug resistance types
157 Sensitive
18 RR-TB
37 HR-TB
25 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
101 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 21 |
| La1;lineage4.9 | 3 |
| lineage4.9 | 192 |
| lineage4.7 | 2 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.1.2.1 | 8 |
| La1.8.1 | 3 |
| 5 | |
| lineage4.3.4.2.1 | 9 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.3.2.1 | 2 |
| lineage3.1.2.1 | 2 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.5 | 2 |
| La1.6 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3.3 | 7 |
| lineage4.8 | 4 |
| lineage4.1.2 | 2 |
| lineage4.2.1 | 6 |
| lineage1.1.2 | 2 |
| lineage4.2.2.2 | 1 |
| La1.3 | 3 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage4.4.1.1 | 3 |
| lineage2.2;lineage4 | 2 |
| lineage3 | 9 |
| lineage4.1.1.3 | 3 |
| La3;lineage4.9 | 5 |
| lineage2.2.1.1 | 2 |
| lineage4 | 3 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | 1 |
| lineage1.1.1.1 | 1 |
| lineage3;lineage4 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| La1.2.BCG | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage5.2 | 2 |
| lineage4.3.4.2 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.8.1 | 2 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.9.1 | 2 |
| La1.2 | 2 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage3.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.2.1.2 | 1 |
| La3;lineage4 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 2 |
| lineage6.1.3 | 1 |
| lineage2.2.1;lineage4.4.2 | 1 |
| lineage1.1.3.1 | 2 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| lineage3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 351 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR7496523 | Other | lineage4.7 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR970445 | MDR-TB | lineage2.2.1 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4796577 | HR-TB | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1173568 | Sensitive | lineage4.9 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR736872 | HR-TB | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR10993951 | RR-TB | La1.6 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR1180345 | Other | lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR11342669 | Other | lineage4.8 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR7131123 | Other | lineage4.8 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | ERR10796589 | Other | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR736848 | Other | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR4817434 | Other | lineage3 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | SRR5341345 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR16156817 | Other | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR4831839 | MDR-TB | lineage2.2.1 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR8692887 | Other | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR970441 | RR-TB | lineage2.2.1.1 | None | ERR867572 | Other | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4814976 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3468488 | Other | La1.8.1 | None | ERR4814683 | Sensitive | lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | None | ERR363445 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR6045158 | Other | lineage4.9 | None | DRR185000 | Other | lineage1.1.1.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR5341467 | Other | lineage4.9 | None | SRR1173777 | Sensitive | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR12708416 | Sensitive | None | ERR10796598 | Other | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR5341395 | Sensitive | lineage3 | None | SRR1915487 | Other | La1.2.BCG | None | ERR349296 | Sensitive | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR4769555 | Sensitive | La1.3 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR1180996 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR8692905 | Sensitive | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR1181368 | Other | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR228175 | Sensitive | lineage3 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR8692863 | Other | lineage2.2;lineage4 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR1158918 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR7645928 | Other | lineage4.7 | None | ERR137286 | Other | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR1172807 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR400320 | Sensitive | lineage4.9 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | SRR1159378 | Other | lineage4.9 | None | SRR1173719 | Other | lineage4.9 | None | ERR9786592 | Other | lineage4.3.4.2 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR6358979 | Other | lineage4.9 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR502473 | RR-TB | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR970413 | MDR-TB | lineage2.2.1 | None | ERR037504 | Other | lineage4.9.1 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR2100532 | Sensitive | lineage3 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR1173770 | Other | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | SRR1173281 | Other | lineage3 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR1181214 | Other | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | SRR7535082 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | ERR11081071 | Sensitive | lineage4.3.3 | None | ERR9786597 | Other | lineage4.6.2.2 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR3283028 | Other | La3;lineage4 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR7851312 | Other | La1.2 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR4811379 | Sensitive | lineage2.2.1;lineage4.4.2 | None | SRR6045371 | Other | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR4816417 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR363502 | Other | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR363447 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None |
|---|
