EBG00000313339 - n.2967T>A
Drug resistance types
41 Sensitive
4 RR-TB
5 HR-TB
5 MDR-TB
15 Pre-XDR-TB
0 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 11 |
| lineage4.9;La1.8.1 | 1 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage4.2.1 | 1 |
| La1.8.1 | 3 |
| lineage5.1.1 | 2 |
| lineage3 | 6 |
| lineage4.9 | 18 |
| lineage4.6.2.2 | 3 |
| lineage4.8 | 1 |
| lineage2.2.2 | 4 |
| La1.2 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage1.1.1 | 3 |
| lineage5.1.4 | 1 |
| lineage4.3.4.1 | 3 |
| lineage5.1.2 | 1 |
| lineage4.4.1.2 | 2 |
| lineage1.1.3.2 | 2 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.3.3 | 3 |
| lineage4.1.2 | 6 |
| La1.6 | 2 |
| lineage2.2.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| La1.7.1 | 1 |
| La1.4 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.1.2.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.5 | 1 |
| 3 | |
| lineage3.1.1 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.6.1.2 | 1 |
| lineage4 | 1 |
| lineage3.1.2.1 | 3 |
| lineage4.9.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage1.2.2.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.3.2.1;lineage2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 104 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6982349 | Sensitive | lineage2.2.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | SRR6982053 | Sensitive | lineage4.9;lineage4.3.4.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR8346061 | Pre-XDR-TB | lineage2.2.1 | None | ERR5311088 | Other | La1.8.1 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | DRR184913 | Sensitive | lineage2.2.1 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | ERR1034687 | Sensitive | lineage3 | None | ERR1082121 | Sensitive | lineage4.9 | None | ERR1203078 | Sensitive | lineage4.6.2.2 | None | ERR108424 | Sensitive | lineage4.8 | None | ERR133816 | MDR-TB | lineage2.2.1 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4187916 | Other | La1.8.1 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769419 | Other | lineage4.9 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR4769418 | Other | La1.2 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR718268 | Sensitive | lineage1.1.1 | None | ERR6197040 | Other | lineage4.9 | None | ERR6197028 | Other | lineage4.9 | None | ERR702423 | Sensitive | lineage5.1.4 | None | ERR9786258 | Sensitive | lineage4.3.4.1 | None | ERR751339 | Sensitive | lineage5.1.2 | None | ERR736822 | Sensitive | lineage4.4.1.2 | None | ERR736879 | Sensitive | lineage1.1.3.2 | None | ERR760877 | MDR-TB | lineage4.1.2.1.1 | None | ERR9786558 | Sensitive | lineage4.3.4.2 | None | ERR987719 | HR-TB | lineage3 | None | SRR10869017 | Pre-XDR-TB | lineage4.3.3 | None | SRR1011488 | Other | lineage2.2.1 | None | SRR1062859 | Sensitive | lineage2.2.1 | None | SRR1180237 | Sensitive | lineage4.1.2 | None | SRR10993953 | Other | La1.6 | None | SRR10993957 | Other | La1.6 | None | SRR11972212 | MDR-TB | lineage2.2.1.1 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR1181242 | Sensitive | lineage4.1.2 | None | SRR1182994 | Sensitive | lineage4.1.2 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR1792232 | Other | La1.7.1 | None | SRR16278274 | Other | La1.4 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | SRR17567930 | Other | lineage4.4.1.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR21657198 | HR-TB | lineage4.3.3 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR176771 | Sensitive | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR4815310 | Other | None | ERR181940 | Sensitive | lineage3.1.1 | None | ERR181708 | RR-TB | lineage4;lineage1.1.2 | None | ERR161170 | Sensitive | lineage4.3.4.1 | None | ERR161173 | Sensitive | lineage4.3.4.2.1 | None | ERR163970 | Sensitive | lineage4.6.1.2 | None | ERR4815550 | Other | lineage4 | None | ERR176781 | Sensitive | lineage1.1.3.2 | None | ERR163988 | Sensitive | lineage4.1.2 | None | ERR4814976 | Other | lineage4.9 | None | ERR212033 | HR-TB | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR1873463 | MDR-TB | lineage2.2.2 | None | ERR1873561 | Pre-XDR-TB | lineage2.2.2 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR212082 | Sensitive | lineage4.9.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4818831 | Other | lineage3 | None | ERR245662 | Sensitive | lineage1.2.2.1 | None | ERR4816417 | Other | lineage4.9 | None | ERR216930 | Sensitive | lineage4.3.4.1 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR5341430 | Other | lineage3 | None | ERR4820478 | Other | lineage3.1.3 | None | ERR4820193 | Other | lineage3 | None | SRR5341462 | Pre-XDR-TB | lineage3.1.2.1 | None | SAMN02585942 | Sensitive | lineage4.1.2 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | SRR6045957 | Other | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | ERR2660542 | Sensitive | lineage4.3.2.1;lineage2.2.1 | None | SRR5818394 | Other | lineage4.9 | None | SRR6044925 | Sensitive | lineage4.9 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502480 | Other | lineage5.1.1 | None | SRR6982099 | Sensitive | lineage4.3.4.2.1 | None | SRR6832644 | Other | lineage4.3.3 | None |
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