Rv1630 - c.753G>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
56 Sensitive
12 RR-TB
14 HR-TB
6 MDR-TB
3 Pre-XDR-TB
2 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 15 |
| lineage4.9 | 69 |
| lineage1.1.3.2 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4 | 2 |
| La1.2.BCG;lineage4.9 | 1 |
| lineage3 | 2 |
| La1.4 | 1 |
| lineage2.2.1 | 8 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| lineage3;lineage4.9 | 1 |
| 2 | |
| lineage4.1.1.3;lineage4.9 | 2 |
| M.canetti;lineage2.2 | 2 |
| lineage4.3.3 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| La1.7;lineage4.9 | 2 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.3 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| La3;lineage4.9 | 1 |
| La1.2.BCG | 3 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage1;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1 | 1 |
| lineage4.3.2.1 | 1 |
| La1.2 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage5.1.4 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 141 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR4816852 | Other | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR9786525 | Other | lineage4 | None | SRR1915481 | Other | La1.2.BCG;lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR990545 | Other | lineage3 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820265 | Other | lineage4.1.2.1 | None | SRR3675387 | Other | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR9786843 | Other | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR4815471 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR3675522 | Other | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | ERR12015086 | RR-TB | lineage4.8 | None | ERR978752 | Other | lineage4.8 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR400345 | Other | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR6046245 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR978760 | RR-TB | lineage4.8 | None | SRR3675318 | Other | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR926163 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.3 | None | SRR23961542 | Other | La1;lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR212138 | HR-TB | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4814976 | Other | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR12708416 | Sensitive | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR4818536 | Other | lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR978751 | Other | lineage4.8 | None | ERR12015084 | Other | lineage4.8 | None | ERR3797029 | Other | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR3675279 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR9786526 | Other | lineage4.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR176751 | Other | lineage4.9 | None | SRR23961549 | Other | La1.2 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR1915487 | Other | La1.2.BCG | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR212033 | Other | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1181289 | Other | lineage2.2.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR11252736 | Other | lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | SRR1915479 | Other | La1.2.BCG | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR978762 | Other | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None |
|---|
