EBG00000313325 - n.380C>G
Drug resistance types
29 Sensitive
24 RR-TB
23 HR-TB
15 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
112 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 41 |
| lineage2.2.1 | 18 |
| lineage3 | 24 |
| lineage2.2.1.1 | 3 |
| lineage1.2.2.2 | 2 |
| lineage4.3.4.2.1 | 4 |
| lineage4.8 | 35 |
| lineage3.1.2.1 | 3 |
| lineage4.4.1.1 | 5 |
| lineage4.3.4.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.9;lineage1.1.2 | 1 |
| 2 | |
| lineage4 | 10 |
| lineage4.1.2.1 | 9 |
| lineage4.1.1.3 | 4 |
| lineage4.1.2 | 4 |
| lineage4.5 | 1 |
| lineage2.2.1.2 | 2 |
| lineage4.6 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.3 | 4 |
| lineage1.1.3.1 | 3 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage1.1.3.2 | 1 |
| lineage3.1.1 | 2 |
| lineage3.1.2 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.1.1 | 2 |
| lineage2.2.2 | 3 |
| lineage1.1.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| La1.8.1 | 3 |
| lineage4.6.1.1 | 3 |
| lineage4.2.1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| La1.3 | 2 |
| lineage4.9;La1.3 | 2 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.7 | 2 |
| lineage6 | 2 |
| lineage4.4.1.1.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.4.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 216 |
Geographic prevalence
Country level data for this variant is available for 38 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4814976 | Other | lineage4.9 | None | ERR4815787 | Other | lineage2.2.1 | None | ERR4814789 | Other | lineage3 | gb | ERR4815503 | Other | lineage2.2.1.1 | gb | ERR4815517 | Other | lineage1.2.2.2 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR4815556 | RR-TB | lineage3 | None | ERR4815036 | Sensitive | lineage4.8 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4816015 | HR-TB | lineage4.4.1.1 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR2229541 | Other | lineage4.8 | None | ERR2228965 | Other | lineage4.8 | None | ERR2229540 | Other | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR4815966 | Other | lineage4.3.4.2 | gb | ERR2027220 | Other | lineage3.1.3 | None | ERR4816206 | Sensitive | lineage4.9;lineage1.1.2 | gb | ERR2229733 | Other | lineage4.8 | dk | ERR2446509 | Other | lineage3 | nl | ERR2229148 | Other | lineage4.8 | dk | ERR2229147 | Other | lineage4.8 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR4817069 | RR-TB | None | ERR4816322 | Other | lineage4.9 | None | ERR4817109 | Other | lineage3 | None | ERR2229811 | Other | lineage4.8 | dk | ERR2229197 | Sensitive | lineage4 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR2229204 | Other | lineage4.8 | None | ERR2229349 | Sensitive | lineage4.8 | dk | ERR216965 | HR-TB | lineage4.9 | None | ERR4817194 | Other | lineage4.1.2.1 | None | ERR2229366 | Other | lineage4.8 | None | ERR2229701 | Sensitive | lineage4.8 | None | ERR4817434 | Other | lineage3 | None | ERR2229436 | Other | lineage4.8 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR4817262 | Other | lineage4.8 | None | ERR2228813 | Other | lineage4.8 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR4817301 | Other | lineage4.9 | None | ERR4815816 | Other | lineage4.5 | gb | ERR2228890 | Other | lineage4 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR4815815 | Sensitive | lineage4 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2229810 | Other | lineage4.8 | None | ERR4817907 | Other | lineage3 | gb | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4817976 | HR-TB | lineage4.1.2.1 | None | ERR2510756 | HR-TB | lineage2.2.1 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR4818104 | Other | lineage4.1.2 | gb | ERR2513149 | Other | lineage2.2.1.2 | gb | ERR2512423 | Other | lineage4.1.1.3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR3276144 | Other | lineage3 | nl | ERR4818831 | Other | lineage3 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR2512599 | Other | lineage3 | gb | ERR4818530 | Other | lineage2.2.1 | gb | ERR4817555 | RR-TB | lineage3 | None | ERR4818536 | Other | lineage4.9 | None | ERR2513512 | Sensitive | lineage4.6 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR2513354 | Sensitive | lineage3 | None | ERR2513628 | Other | lineage4.1.2.1 | None | ERR4819131 | Other | lineage4 | None | ERR2513652 | Sensitive | lineage4.1.1.3.1 | gb | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819145 | Other | lineage4.1.2.1 | gb | ERR4820230 | Other | lineage4.1.2.1 | gb | ERR2514215 | Other | lineage2.2.1 | gb | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819414 | Other | lineage1.1.3.1 | gb | ERR4820290 | Other | lineage3 | None | ERR2514137 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819462 | Other | lineage4 | None | ERR4819555 | Other | lineage4.8 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR4820464 | Other | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4820503 | Other | lineage2.2.1 | None | ERR4820511 | Sensitive | lineage4.3.3 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR4819872 | HR-TB | lineage4.4.1.1 | None | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR4820570 | Sensitive | lineage3.1.1 | gb | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR2515062 | Other | lineage2.2.1.2 | gb | ERR4820614 | Other | lineage3.1.2 | None | ERR2514926 | Other | lineage4.6.2.2 | gb | ERR4820185 | Sensitive | lineage4.9 | None | ERR4820130 | Other | lineage3 | None | SRR5535696 | MDR-TB | lineage4.3.3 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4820193 | Other | lineage3 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR6045480 | Other | lineage4.1.1 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | ERR4821519 | Other | lineage3 | gb | ERR270777 | HR-TB | lineage4.1.2 | None | ERR4821280 | Other | lineage4.1.1 | gb | ERR4822133 | MDR-TB | lineage3 | None | SRR5818394 | Other | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | ERR4829500 | Sensitive | lineage4.1.2.1 | it | SRR5818415 | Sensitive | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR6045263 | Sensitive | lineage4.9 | None | SRR5818400 | Other | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | SRR6045288 | Other | lineage3 | gb | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046291 | Other | lineage3 | None | ERR4828879 | MDR-TB | lineage3 | None | SRR6152899 | MDR-TB | lineage2.2.2 | ca | SRR6046641 | Other | lineage4.8 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046541 | Other | lineage4.9 | None | SRR6046612 | Other | lineage1.1.1.1 | None | SRR6152980 | HR-TB | lineage4.8 | ca | SRR9971353 | MDR-TB | lineage2.2.2 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6797425 | Sensitive | lineage1.1.3.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR6397733 | Other | lineage4.4.1.2 | None | SRR6397815 | Other | lineage4.4.1.1 | None | ERR3275190 | Other | lineage3 | nl | ERR5087807 | Other | La1.8.1 | None | SRR7517720 | MDR-TB | lineage3.1.2.1 | None | SRR8600288 | Other | La1.8.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR7585435 | Other | lineage4.9 | None | ERR019855 | Other | lineage3 | None | DRR034348 | Other | lineage2.2.1 | None | ERR017781 | Other | lineage3 | None | SRR7646056 | Other | lineage4.2.1.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR10796584 | Other | lineage4.9 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3283041 | Other | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3797063 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR3994102 | Sensitive | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769423 | Other | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769495 | Other | La1.3 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR6197022 | Other | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR5864927 | MDR-TB | lineage2.2.1 | None | ERR5864713 | MDR-TB | lineage2.2.1 | None | ERR6197032 | Other | lineage4.9 | None | ERR6197029 | Other | lineage4.7 | None | ERR6358951 | HR-TB | lineage4 | None | ERR736816 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR9787033 | Sensitive | lineage6 | None | ERR9786613 | Sensitive | lineage4.1.2.1 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR9787336 | Other | lineage6 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | SRR11972327 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173833 | Other | lineage4.9 | None | SRR1184012 | Other | lineage4.1.1.3 | None | SRR14801720 | RR-TB | lineage4.8 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR2100877 | HR-TB | lineage4.1.2 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR4814671 | Other | lineage3 | gb | SRR3675491 | Other | lineage4.7 | None | ERR4815783 | Other | lineage4.1.2.1 | gb |
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