EBG00000313325 - n.644A>T


Drug resistance types
80 Sensitive 34 RR-TB 31 HR-TB 24 MDR-TB 16 Pre-XDR-TB 0 XDR-TB 141 Other
lineage Counts
lineage Count
lineage4.1.2.1 9
lineage4.5 2
lineage1.1.1 2
lineage4.9 117
lineage4.1.2 2
lineage2.2.1 25
La1.3 5
lineage4.3.4.2.1 4
3
lineage4.8 41
lineage1.2.2.1;lineage4.4.1.1 2
lineage4.8.1 2
lineage4.1.1.2 1
lineage4.3.3 7
lineage4.1.1.3.1 2
lineage4.2.2.2 4
lineage2.2.2 3
lineage3 15
lineage4.1.1.3 7
La3;lineage4.9 8
La1.7;lineage4.9 3
lineage4.1.1.1 1
lineage2.2;lineage4.9 1
lineage3;lineage4 1
lineage4.2.1 3
lineage4 3
lineage4.4.1.1 3
lineage3.1.2.1 3
lineage1.2.1.2 1
lineage2.2;lineage4 1
lineage2.2.1;lineage4.9 3
La1.7 1
lineage4.4.1.1.1 3
lineage3.1.2 1
La3;lineage4 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.6 1
lineage1.2.1.1 1
La1.8.1 5
lineage6.1.3 2
lineage2.2.1.1 1
lineage1.1.2 1
lineage4.3.2.1 2
lineage4.7 2
lineage2.2.1;lineage4 2
La1.7;lineage3.1;lineage4 1
lineage4.3.4.1 1
lineage3.1.2.1;lineage4.9 1
lineage1.2.2.2 1
La1;lineage4.9 1
lineage4.3.2 1
lineage1.1.3.1 1
La1.7;lineage4.3.4.1 1
La1.2 1
lineage4.3.3;lineage4.9 1
M.canetti;lineage4.9 1
La1.4 1
lineage4.1 1
lineage4.6.2.2 1
lineage4.2.2 1
lineage2.2.1;lineage4.5 1
lineage2;lineage4.9 1
lineage4.4.2 1
spoligotype Counts
spoligotype Count
None 326
Geographic prevalence
Country level data for this variant is available for 12 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR13180363 Sensitive lineage4.1.2.1 None
SRR21713567 Other lineage4.5 None
SRR21658550 Other lineage1.1.1 None
SRR1175512 Sensitive lineage4.9 None
SRR11342658 RR-TB lineage4.1.2 None
SRR12708392 Other lineage2.2.1 None
ERR502470 RR-TB lineage4.9 None
ERR4769555 Sensitive La1.3 None
SRR1180413 Sensitive lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR867571 Other lineage4.9 None
ERR473323 HR-TB lineage4.9 None
SRR6045359 HR-TB lineage4.9 None
SRR8692887 Other None
SRR8692905 Sensitive None
SAMEA3501065 RR-TB lineage4.8 None
SRR5818428 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR11465711 Other lineage1.2.2.1;lineage4.4.1.1 None
SRR5818470 Other lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR1181368 Other lineage4.9 None
SRR7069473 Other lineage4.1.1.2 None
ERR911929_ERR911930 Other lineage4.8 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR5818388 Other lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
ERR978694 Other lineage4.8 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR7069931 Other lineage4.2.2.2 None
ERR4769493 Other lineage4.9 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
ERR4769408 Other La1.3 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR1180375 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
ERR9786076 Other lineage3 None
SRR7069837 Sensitive lineage4.1.1.3 None
ERR3797048 Other La3;lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SRR18003047 MDR-TB lineage2.2.1 None
ERR4815550 Other lineage2.2;lineage4.9 None
SRR6045267 RR-TB lineage4.8 None
ERR2446509 Other lineage3 nl
ERR978761_ERR978762_ERR978760 RR-TB lineage4.8 None
SRR3675230 Other lineage3;lineage4 None
ERR4821962 Other lineage4.1.1.3 gb
SRR7755654 Pre-XDR-TB lineage4.2.1 None
SRR5818399 Sensitive lineage4.9 None
ERR978765 RR-TB lineage4.8 None
ERR4798823 HR-TB lineage4 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR11342636 MDR-TB lineage4.3.3 None
ERR3283011 Other La3;lineage4.9 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR7070195 Sensitive lineage3.1.2.1 None
ERR485006 HR-TB lineage4.9 None
SRR20969475 Other lineage1.2.1.2 None
SRR12420628 MDR-TB lineage2.2.1 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR5818460 Other lineage4.9 None
ERR978751 Other lineage4.8 None
SRR5818411 RR-TB lineage4.9 None
ERR867544 Other lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
SRR8692863 Other lineage2.2;lineage4 None
ERR4769552 Sensitive La1.3 None
SRR5818424 Sensitive lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR4820193 Other lineage3 None
ERR736831 Other lineage4.9 None
ERR978766 RR-TB lineage4.8 None
SRR10315556 Sensitive lineage2.2.1 None
ERR3797064 Other La3;lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR867538 Other lineage4.2.2.2 None
SRR5818425 Other lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR3675222 Other La1.7 None
SRR3675389 Other lineage4.9 None
ERR978734_ERR978733_ERR978735 RR-TB lineage4.8 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
DRR034348 Other lineage2.2.1 None
SRR12708419 Other lineage4.3.3 None
SRR1735598 RR-TB lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR1180410 Sensitive lineage4.9 None
SRR5818452 Other lineage4.9 None
ERR2027250 Other lineage3.1.2 None
ERR867569 Other lineage4.9 None
SAMEA3501052 RR-TB lineage4.8 None
ERR3283028 Other La3;lineage4 None
ERR4769442 Sensitive lineage4.9 None
ERR10796632 Other lineage4.3.3 None
ERR2514215 Other lineage2.2.1 gb
SRR5818414 Other lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR978755 RR-TB lineage4.8 None
SRR1180300 Sensitive lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR7069922 Other lineage2.2.1 None
ERR978746_ERR978747_ERR978748 RR-TB lineage4.8 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR6044936 Other lineage4.6 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR1180345 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR4821718 Sensitive lineage4.2.2.2 gb
ERR978756 Other lineage4.8 None
SRR5818394 Other lineage4.9 None
ERR3797067 Other La1.8.1 None
ERR3797079 Sensitive lineage4.9 None
ERR978694_ERR978693 Other lineage4.8 None
SRR7069391 Other lineage4.9 None
ERR978747 Other lineage4.8 None
SRR11462861 Other La1.8.1 None
ERR4815022 Other lineage3.1.2.1 None
SAMEA3501073 RR-TB lineage4.8 None
ERR3806588 Other lineage6.1.3 None
SRR18909918 Other lineage2.2.1.1 None
ERR4596902 MDR-TB lineage3 None
ERR11466044 Other lineage4.1.1.3 None
ERR867575 Other lineage4.9 None
SRR8651616 MDR-TB lineage2.2.1 None
ERR4819314 HR-TB lineage1.1.1 None
ERR978757 RR-TB lineage4.8 None
ERR2027257 Other lineage4.1.2.1 None
SRR5153091 HR-TB lineage4.3.3 None
SRR1184021 Sensitive lineage4.9 None
ERR4816571 Sensitive lineage1.1.2 None
ERR067712 Sensitive lineage4.9 None
SRR5818449 MDR-TB lineage4.9 None
ERR867574 Other lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
ERR867573 Other lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR1175487 Sensitive lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR2503533 Other lineage4.1.2.1 fi
ERR4769439 HR-TB lineage4.9 None
ERR978750_ERR978752_ERR978751 RR-TB lineage4.8 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR4829360 Sensitive lineage4.7 None
SRR5818647 Other lineage4.3.4.2.1 None
ERR4818561 Sensitive lineage4.9 None
SRR7069800 Other lineage3.1.2.1 None
ERR1063855 Other lineage4.9 None
ERR4816868 Other lineage4.4.1.1 None
SRR12708415 HR-TB lineage2.2.1 None
SRR6045002 RR-TB lineage4.9 None
SRR11342686 MDR-TB lineage4.8 None
SRR1181351 Sensitive lineage4.9 None
ERR978748 Other lineage4.8 None
ERR978755_ERR978756_ERR978754_ERR978757 RR-TB lineage4.8 None
ERR4769514 Other La1.3 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR1181349 Sensitive lineage4 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR1180312 Sensitive lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR7236374 Other La1.8.1 None
SRR5818386 Other lineage4.9 None
ERR867554 Other lineage4.3.4.1 None
ERR6359066 HR-TB lineage4.9 None
ERR10796559 Other lineage4.9 None
SRR3675245 Other lineage4.1.2.1 None
ERR867526 MDR-TB lineage2.2.1 None
ERR4816548 HR-TB lineage4.5 None
ERR978727 Other lineage4.8 None
ERR5979454 Pre-XDR-TB lineage3 None
ERR3797063 Other La3;lineage4.9 None
ERR4821769 Other lineage4.1.2.1 None
SRR1175052 HR-TB lineage4.9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
ERR911930 Other lineage4.8 None
SRR7496471 Sensitive lineage4 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR11972300 MDR-TB lineage2.2.1 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR9971270 RR-TB lineage2.2.1 None
ERR4769550 Sensitive La1;lineage4.9 None
ERR867572 Other lineage4.9 None
SRR1172807 Sensitive lineage4.9 None
SRR14801652 HR-TB lineage4.3.3 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR3283047 Sensitive La3;lineage4.9 None
ERR3275190 Other lineage3 nl
SRR5818391 Other lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR5818464 Other lineage4.9 None
ERR4769495 Other La1.3 None
ERR4814976 Other lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
SRR3675488 Other La1.7;lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
SAMEA3501063 RR-TB lineage4.8 None
SRR1180250 Other lineage4.9 None
SRR5818448 Other lineage4.9 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR5818466 Other lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR6045124 Other lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
ERR11465509 Sensitive lineage4.3.4.2.1 None
ERR037234 Sensitive lineage4.9 None
SRR5818415 Sensitive lineage4.9 None
ERR4818272 Other lineage4.3.2 None
ERR6358951 Sensitive lineage4.9 None
ERR867540 MDR-TB lineage2.2.1 None
ERR3283014 Other La3;lineage4.9 None
ERR867567 RR-TB lineage3 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
ERR4821616 Other lineage1.1.3.1 None
SRR3675509 Other lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
SAMEA3501067 RR-TB lineage4.8 None
ERR4769418 Other La1.2 None
ERR4818831 Other lineage3 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR10796636 Other lineage4.1.2.1 None
SRR6832644 Other lineage4.3.3;lineage4.9 None
ERR4769516 Sensitive lineage4.9 None
SRR6044904 Other lineage3 None
ERR2886463 Sensitive lineage2.2.1 None
ERR978752 Other lineage4.8 None
SRR21677886 Sensitive lineage4.9 None
SRR5818459 Other lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
ERR911929 Other lineage4.8 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR4814905 Sensitive lineage4.8 gb
ERR978734 RR-TB lineage4.8 None
SRR6044835 Other lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR16278274 Other La1.4 None
ERR978726_ERR978727 RR-TB lineage4.8 None
SAMEA3501070 RR-TB lineage4.8 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR4815502 Other lineage4.1 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
SRR1175506 Sensitive lineage4.9 None
SRR18002947 MDR-TB lineage2.2.1 None
ERR978761 Other lineage4.8 None
SRR8692897 Other lineage4.9 None
SRR7496523 Other lineage4.7 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
SRR7070157 Other lineage4.1.1.3.1 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
SAMEA3501046 RR-TB lineage4.8 None
ERR4796577 HR-TB None
ERR4819175 Other lineage4.1.1.3 gb
ERR6359074 HR-TB lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
ERR867566 Other lineage4.9 None
SRR5818400 Other lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
SRR5818395 Sensitive lineage4.9 None
ERR867568 Other lineage2.2.1;lineage4 None
ERR9787336 RR-TB lineage6.1.3 None
SRR21240055 Other lineage4.1.2.1 None
ERR9786528 Sensitive lineage4.6.2.2 None
ERR4586795 Other La1.8.1 None
ERR4822138 Other lineage4.1.2.1 None
SRR2024953 MDR-TB lineage2.2.1 cn
SRR5818429 Sensitive lineage4.9 None
SRR7617847 Other La1.8.1 None
SRR6045832 Other lineage4.9 None
SRR3675552 Other lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR4769433 RR-TB lineage4.9 None
ERR4816322 Other lineage4.9 None
SAMEA3501015 Other lineage4.8 None
ERR2513259 Other lineage3 None
ERR3283031 Other La3;lineage4.9 None
SRR18911231 Sensitive lineage4.1.1.3 None
ERR176741 Other lineage4.9 None
SRR5818435 Sensitive lineage4.9 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR11972369 Pre-XDR-TB lineage2.2.1 None
SRR11342682 Other lineage4.1.2 None
ERR216965 Sensitive lineage4.9 None
DRR188816 Other lineage4.2.2 None
ERR978735 Other lineage4.8 None
ERR3275709 HR-TB lineage3 nl
ERR978762 Other lineage4.8 None
SRR10315751 MDR-TB lineage4.8 None
SRR6046250 Other lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
SRR18003031 HR-TB lineage2.2.1 None
ERR4816470 HR-TB lineage3 None
SRR8692879 Sensitive lineage4.9 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
SAMEA3450033 Other lineage4.8 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
ERR4814639 HR-TB lineage4.9 None
SRR5818389 Other lineage4.9 None
ERR3276144 Other lineage3 nl
ERR11465714 Other lineage1.2.2.1;lineage4.4.1.1 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR978767 RR-TB lineage4.8 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR1172717 Sensitive lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR12708409 HR-TB lineage4.3.3 None
SRR5818455 Sensitive lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR4769444 HR-TB lineage4.9 None
SRR5818408 Other lineage4.9 None