EBG00000313339 - n.1885A>G
Drug resistance types
11 Sensitive
5 RR-TB
7 HR-TB
6 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 9 |
| lineage3.1.2.1 | 2 |
| lineage4.8 | 5 |
| lineage4.4.1.1 | 3 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1.2.1 | 8 |
| lineage4.9 | 17 |
| lineage4.1.1.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4 | 4 |
| lineage4.3.3 | 3 |
| lineage4.2.1 | 1 |
| La1.2 | 2 |
| lineage4.4.2 | 1 |
| lineage2.2.1 | 2 |
| lineage1.1.2 | 2 |
| lineage2.2.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage1.1.1 | 1 |
| 1 | |
| lineage4.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.5 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 77 |
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR4820484 | Other | lineage4.8 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821519 | Other | lineage3 | gb | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6046177 | Other | lineage3.1.2 | None | ERR4821718 | Other | lineage4.2.2.2 | gb | SRR6045713 | Sensitive | lineage3.1.3 | gb | SRR6046442 | Other | lineage3 | None | SRR7131123 | Other | lineage4.8 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | SRR7851312 | Other | La1.2 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR4676882 | HR-TB | lineage4.8 | None | ERR4769418 | Other | La1.2 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR8665619 | Pre-XDR-TB | lineage2.2.1 | None | ERR9030460 | MDR-TB | lineage1.1.2 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR12199465 | Sensitive | lineage2.2.1.1 | None | SRR14165104 | Sensitive | lineage4.1.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR12882672 | HR-TB | lineage1.1.2 | None | ERR4814976 | Other | lineage4.9 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR4815310 | Other | None | ERR4815502 | Other | lineage4.1 | None | SRR22424765 | MDR-TB | lineage4 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR4815517 | Other | lineage1.2.2.2 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR4814905 | Other | lineage4.8 | gb | ERR4815550 | Other | lineage4 | None | ERR4814986 | Other | lineage4.3.4.2 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816001 | Other | lineage3 | None | ERR4817109 | Other | lineage3 | None | ERR2229197 | Sensitive | lineage4 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816417 | Other | lineage4.9 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816548 | MDR-TB | lineage4.5 | None | SRR4033680 | Sensitive | lineage4.4.1.1.1 | za | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4816734 | Sensitive | lineage4.9 | None | ERR4817434 | Other | lineage3 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816782 | Other | lineage4.1.2.1 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4818232 | Other | lineage4.1.2 | gb | ERR4818831 | Other | lineage3 | None | ERR4820290 | Other | lineage3 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None |
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