EBG00000313339 - n.2456T>G
Drug resistance types
10 Sensitive
22 RR-TB
2 HR-TB
10 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
100 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 4 |
| lineage4.3.3 | 6 |
| lineage3 | 13 |
| lineage2.2.1 | 17 |
| lineage2.2.1.1 | 2 |
| lineage4.8 | 11 |
| lineage4.2.1 | 1 |
| lineage4 | 4 |
| lineage4.9 | 28 |
| lineage4.1.1 | 2 |
| lineage4.3.4 | 1 |
| lineage4.1.2.1 | 8 |
| La1.2 | 1 |
| La1.3 | 1 |
| lineage4.9;La1.3 | 1 |
| La1.4 | 1 |
| lineage4.4.1.1 | 7 |
| lineage4.3.4.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage3.1.1 | 4 |
| lineage2.2.2 | 3 |
| lineage1.2.1.2 | 1 |
| 2 | |
| lineage1.1.1 | 3 |
| lineage4.2.2.2 | 1 |
| lineage4.3.4.2.1 | 4 |
| lineage4.1 | 1 |
| lineage4.3.1 | 1 |
| lineage3.1.2.1 | 2 |
| lineage5 | 1 |
| lineage3.1.3 | 1 |
| lineage1.1.2 | 4 |
| lineage4.1.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.5 | 2 |
| lineage4.3.2 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage4.4.2 | 1 |
| lineage6.1.3 | 1 |
| lineage4.3.4.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.3.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 154 |
Geographic prevalence
Country level data for this variant is available for 21 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR5311077 | RR-TB | La1.8.1 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR3275190 | Other | lineage3 | nl | SRR8600288 | Other | La1.8.1 | None | SRR7131237 | Other | lineage2.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | ERR10796635 | Other | lineage4 | None | ERR323061 | Sensitive | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4799908 | Pre-XDR-TB | lineage3 | in | SRR16278274 | Other | La1.4 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR10851725 | Sensitive | lineage4.3.4.2 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR12882280 | Sensitive | lineage3.1.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR16156775 | Other | lineage4.9 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR21677870 | Sensitive | None | SRR21658550 | Other | lineage1.1.1 | None | ERR4815268 | Other | lineage4.8 | None | SRR21727728 | Sensitive | lineage4.4.1.1 | None | SRR22175229 | MDR-TB | lineage4.2.2.2 | None | SRR22175263 | Pre-XDR-TB | lineage4.8 | None | ERR4815310 | Other | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | SRR3675230 | RR-TB | lineage3 | None | ERR4815550 | Other | lineage4 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814813 | Sensitive | lineage4.3.1 | gb | ERR4814976 | Other | lineage4.9 | None | ERR4815849 | Other | lineage3.1.1 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4816967 | RR-TB | lineage5 | None | ERR2027220 | Other | lineage3.1.3 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR4817070 | Other | lineage1.1.2 | None | ERR2446509 | Other | lineage3 | nl | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4816569 | Other | lineage4.3.3 | gb | ERR4816549 | Other | lineage2.2.1 | None | ERR4816758 | Other | lineage4.8 | gb | ERR4817398 | Other | lineage3.1.1 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4817434 | Other | lineage3 | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR4816852 | Other | lineage4.9 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4817730 | Other | lineage4.2.1.1 | gb | ERR4817874 | Other | lineage3 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR3276144 | Other | lineage3 | nl | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR2512443 | Other | lineage4.8 | gb | ERR4818287 | Other | lineage4.5 | gb | ERR4818570 | Other | lineage4.3.3 | None | ERR2512599 | Other | lineage3 | gb | ERR4818407 | Other | lineage4.3.2 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR2513298 | Other | lineage4.8 | gb | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4819191 | Other | lineage4.6.2.2 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4820290 | Other | lineage3 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4819593 | Other | lineage4.5 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR4819528 | RR-TB | lineage3 | None | ERR4819533 | Other | lineage1.1.2 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4819824 | Sensitive | lineage4.4.2 | gb | ERR2514926 | Other | lineage4.6.2.2 | gb | ERR4820130 | Other | lineage3 | None | ERR4821286 | Other | lineage4.8 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820959 | Other | lineage4.1.2.1 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4821796 | Other | lineage4.1.1 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR5818388 | Other | lineage4.9 | None | ERR4822200 | Other | lineage4.3.4.1 | gb | SRR5818395 | Sensitive | lineage4.9 | None | SRR6045642 | Other | lineage3.1.2.2 | None | SRR5818397 | Other | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR5818449 | MDR-TB | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045056 | Other | lineage2.2.1 | gb | SRR6046250 | Other | lineage4.9 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046737 | Other | lineage4.9 | None | SRR6046733 | Pre-XDR-TB | lineage2.2.1 | None |
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