EBG00000313339 - n.473C>T
Drug resistance types
92 Sensitive
15 RR-TB
30 HR-TB
20 MDR-TB
18 Pre-XDR-TB
0 XDR-TB
124 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 58 |
| lineage4.1.2.1 | 15 |
| La1.2 | 3 |
| 27 | |
| lineage2.2.1 | 43 |
| lineage3 | 17 |
| lineage4.9 | 56 |
| lineage3.1.2 | 3 |
| lineage4.5 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage1.2.2.2 | 1 |
| lineage1.1.1 | 4 |
| lineage6.1.1 | 2 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.3.3 | 2 |
| lineage4.6.1.1 | 1 |
| La1.4 | 1 |
| lineage2.2.2 | 4 |
| lineage4.4.2 | 1 |
| lineage4.2.2 | 1 |
| lineage4.8 | 9 |
| lineage2.2.1.1 | 4 |
| lineage4.6.2.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.1 | 2 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage3.1.2.1 | 2 |
| lineage1.2.1.1 | 1 |
| lineage4.1.1 | 2 |
| lineage1.1.2 | 3 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.2.1 | 3 |
| lineage4.3.2 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.1.1.3 | 4 |
| lineage4.2 | 1 |
| lineage3.1.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.7 | 1 |
| lineage3.1.2.2 | 2 |
| lineage4.6.5 | 1 |
| La2 | 1 |
| lineage4.5;lineage2.2 | 1 |
| La1.8.1 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.9;lineage4.3.4 | 1 |
| lineage5.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 299 |
Geographic prevalence
Country level data for this variant is available for 27 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769418 | Other | La1.2 | None | ERR4772225 | Other | La1.2 | None | ERR4796577 | MDR-TB | None | ERR4796441 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797049 | Sensitive | lineage3 | in | ERR4798431 | HR-TB | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4800069 | Sensitive | lineage3.1.2 | in | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR4811030 | Sensitive | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR6865502 | Sensitive | lineage4 | None | ERR4812155 | Sensitive | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR736865 | HR-TB | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117823 | Other | lineage1.1.1 | None | ERR987722 | HR-TB | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1172310 | HR-TB | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1174897 | HR-TB | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR16156775 | Other | lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR17832802 | HR-TB | lineage3 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19303819 | Other | lineage4.6.2.2 | None | SRR19303817 | Other | lineage2.2.1 | None | SRR19303907 | Other | lineage4.8 | None | SRR19303899 | Other | lineage3 | None | SRR22048352 | Sensitive | lineage4.2.2.2 | None | SRR19304104 | Other | lineage4.8 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR4815310 | Other | None | ERR4814521 | Sensitive | lineage2.2.1 | gb | ERR4815236 | Sensitive | lineage2.2.1 | gb | SRR3675209 | Sensitive | lineage4.9 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4815502 | Other | lineage4.1 | None | SRR3675247 | Other | lineage4.9 | None | ERR4815550 | Other | lineage4 | None | SRR3675279 | Other | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR4814905 | Other | lineage4.8 | gb | SRR3675292 | Sensitive | lineage4 | None | SRR3675509 | Other | lineage4.9 | None | ERR4814976 | Other | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | SRR3675387 | Sensitive | None | ERR176740 | HR-TB | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR4815917 | Other | lineage2.2.1 | gb | SRR3675522 | Other | None | SRR3675513 | Other | lineage4.8 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | SRR3675553 | Sensitive | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816417 | Other | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4817206 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4816852 | Other | lineage4.9 | None | ERR4817434 | Other | lineage3 | None | ERR4818718 | Other | lineage4.8 | gb | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR2513443 | Sensitive | lineage4.3.4.2.1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818831 | Other | lineage3 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | SRR5341437 | Sensitive | lineage4.9 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4819533 | Other | lineage1.1.2 | None | ERR4820290 | Other | lineage3 | None | SRR5341396 | Other | lineage4 | None | ERR4820362 | Sensitive | lineage4.2 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR4819723 | Other | None | ERR4820787 | Other | lineage3.1.1 | gb | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4820193 | Other | lineage3 | None | ERR2446382 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SRR6046087 | Other | None | SRR5341470 | HR-TB | None | SRR6045503 | HR-TB | None | ERR4821085 | Other | lineage2.2.1 | None | SRR6046089 | Other | lineage4.1.2.1 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR6045706 | Sensitive | lineage4 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6045600 | Other | lineage3.1.2 | gb | SRR6046210 | Other | lineage4 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044837 | Pre-XDR-TB | lineage2.2.1.1 | gb | SRR6044841 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045952 | HR-TB | None | SRR6044993 | Other | lineage3 | None | SRR6045178 | Other | lineage3 | None | SRR6045986 | Other | lineage3 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045233 | HR-TB | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046397 | Other | None | SRR6152838 | Other | lineage2.2.1.1 | ca | SRR6046410 | Sensitive | lineage4.1.1 | gb | SRR6046442 | Other | lineage3 | None | SRR6046482 | HR-TB | None | SRR6046497 | Other | lineage4.9 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046508 | Sensitive | lineage3.1.2.2 | gb | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046897 | Sensitive | lineage4 | None | ERR502524 | HR-TB | La2 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4831718 | MDR-TB | lineage2.2.1 | vn | ERR4831763 | HR-TB | lineage4.5;lineage2.2 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR4831638 | Sensitive | None | SRR7131075 | Other | lineage4.8 | None | ERR3275190 | Other | lineage3 | nl | ERR502943 | HR-TB | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR7496471 | Sensitive | None | SRR7851312 | Other | La1.2 | None | SRR8600288 | Other | La1.8.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR323039 | HR-TB | None | SRR9971114 | Other | lineage2.2.1 | None | ERR323053 | HR-TB | None | ERR10796589 | Other | lineage4.9 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796566 | Other | lineage4.9;lineage4.3.4 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR10796634 | Other | lineage4 | None | ERR10796629 | Other | lineage4 | None | ERR10796635 | Other | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR373945 | HR-TB | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR400326 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None |
|---|
