EBG00000313339 - n.473C>T
Drug resistance types
61 Sensitive
8 RR-TB
19 HR-TB
21 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
59 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 83 |
| La1.4 | 1 |
| 3 | |
| lineage2.2.1 | 17 |
| lineage4.3.3 | 5 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.1.2.1 | 4 |
| lineage6.1.1 | 2 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.8 | 3 |
| lineage2.2;lineage4.9 | 1 |
| lineage2.2.2 | 2 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.4.1.1 | 3 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4.1.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.8.1 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4 | 3 |
| lineage2.2.1;lineage4 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.2.2.2 | 1 |
| La1.2 | 2 |
| lineage3 | 6 |
| lineage4.1.1.1 | 2 |
| lineage4.9;lineage9 | 2 |
| lineage3;lineage4.9 | 1 |
| lineage1.1.1 | 2 |
| lineage4.3.4.2 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.5 | 1 |
| lineage4.2.1 | 2 |
| La2;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage1.2.1.2 | 1 |
| La1.8.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage5.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 173 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1183111 | HR-TB | lineage4.9 | None | ERR176740 | Other | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR987722 | MDR-TB | None | SRR18003024 | RR-TB | lineage2.2.1 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR7069922 | Other | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR11342669 | Other | lineage4.8 | None | SRR7131123 | Other | lineage4.8 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | ERR349265 | Other | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR11662694 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | ERR867572 | Other | lineage4.9 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR4814976 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR29097037 | Other | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR18003045 | Other | lineage2.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR369162 | Other | lineage4.9 | None | ERR4831718 | MDR-TB | lineage2.2.1 | vn | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR369158 | Other | lineage4.9 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR369151 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR7851312 | Other | La1.2 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR363490 | Sensitive | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR400326 | Other | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR6046802 | Other | lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR4818831 | Other | lineage3 | None | ERR363447 | Other | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR373947 | Other | lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR2517475 | Other | lineage4 | None | ERR4769418 | Other | La1.2 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR19303907 | Other | lineage4.8 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR17832802 | HR-TB | lineage3 | None | SRR18002981 | Other | lineage2.2.1 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | ERR4796577 | HR-TB | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | SRR16156775 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR1175508 | Sensitive | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | SRR7496471 | Sensitive | lineage4 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR6044942 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR349298 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR7236330 | Other | La1.8.1 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None |
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