EBG00000313339 - n.860C>G
Drug resistance types
9 Sensitive
5 RR-TB
6 HR-TB
5 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
79 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1.1 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.3.3 | 4 |
| La1.3 | 3 |
| lineage3 | 15 |
| lineage4.9 | 14 |
| La1.8.1 | 1 |
| lineage4.2.1 | 2 |
| La1.2 | 2 |
| lineage4.9;La1.3 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.4.1.1 | 4 |
| La1.4 | 1 |
| lineage4.8 | 5 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1 | 10 |
| La2 | 1 |
| 4 | |
| lineage1.2.1.2 | 1 |
| lineage4.1.2.1 | 8 |
| lineage1.1.1 | 2 |
| lineage4 | 3 |
| lineage3.1.2.1 | 2 |
| lineage3.1.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.6 | 1 |
| lineage1.1.2 | 2 |
| lineage4.1.1.3 | 3 |
| lineage4.1.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.5 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage3.1 | 1 |
| lineage6.1.3 | 1 |
| lineage4.7 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.1.4 | 1 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 113 |
Geographic prevalence
Country level data for this variant is available for 27 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6152838 | Other | lineage2.2.1.1 | ca | SRR6397640 | Other | lineage4.2.1.1 | None | SRR6832644 | Other | lineage4.3.3 | None | ERR3077969 | Other | La1.3 | None | SRR6964483 | Sensitive | lineage3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR8600288 | Other | La1.8.1 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | SRR7851312 | Other | La1.2 | None | ERR4769404 | Other | La1.3 | None | ERR4769419 | Other | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | ERR10796632 | Other | lineage4.3.3 | None | ERR4769418 | Other | La1.2 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4799793 | Pre-XDR-TB | lineage4.2.2.2 | in | ERR5866478 | MDR-TB | lineage4.2.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR16278274 | Other | La1.4 | None | ERR9117747 | HR-TB | lineage4.8 | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | ERR6197040 | Other | lineage4.9 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | ERR4815310 | Other | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR4814976 | Other | lineage4.9 | None | ERR4814905 | Other | lineage4.8 | gb | ERR4815550 | Other | lineage4 | None | ERR4815065 | Other | lineage4.1.2.1 | gb | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR4816192 | Sensitive | lineage3 | None | ERR4815849 | Other | lineage3.1.1 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR4817017 | Sensitive | lineage4.9 | None | ERR4816293 | Other | lineage4.1.2.1 | None | ERR4816231 | Other | lineage4 | None | ERR4816417 | Other | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816569 | Other | lineage4.3.3 | gb | ERR2446509 | Other | lineage3 | nl | ERR4817131 | Pre-XDR-TB | None | ERR4817434 | Other | lineage3 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816699 | Other | lineage4.6 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817497 | Other | lineage1.1.2 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4816833 | Other | lineage4.1.1.3 | None | ERR4816852 | Other | lineage4.9 | None | ERR4817948 | Other | lineage3 | gb | ERR4817294 | Other | lineage4.1.2 | None | SRR4033490 | Other | lineage2.2.2 | za | ERR4817452 | Other | lineage4.8 | None | ERR4818831 | Other | lineage3 | None | ERR2503533 | Other | lineage4.1.2.1 | fi | ERR4818272 | Other | lineage4.3.2 | None | ERR2512660 | Sensitive | lineage3 | gb | ERR4818432 | HR-TB | lineage4.5 | gb | ERR4817554 | Other | lineage1.1.1 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4820290 | Other | lineage3 | None | SRR5153833 | Other | lineage2.2.1 | None | ERR2513994 | MDR-TB | lineage2.2.1 | gb | ERR4819533 | Other | lineage1.1.2 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4819372 | Sensitive | lineage1.2.1.2.1 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR4819636 | Other | lineage3.1.2 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR2514692 | Other | None | ERR4820833 | HR-TB | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | ERR2514926 | Other | lineage4.6.2.2 | gb | ERR4820193 | Other | lineage3 | None | ERR4820130 | Other | lineage3 | None | ERR4820083 | Sensitive | lineage3.1 | gb | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4821769 | Other | lineage4.1.2.1 | None | SRR5535685 | Sensitive | lineage3 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR4821154 | Other | lineage2.2.1 | gb | ERR4821946 | Sensitive | lineage2.2.1 | gb | ERR4821288 | Other | lineage4.7 | None | ERR4822004 | Other | lineage1.1.1.1 | gb | ERR4828962 | Other | lineage4.1.4 | it | ERR4822138 | Other | lineage4.1.2.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR5818663 | Sensitive | lineage4.1.2.1 | dj | SRR6044904 | Other | lineage3 | None | SRR6046250 | Other | lineage4.9 | None | ERR4821477 | Other | lineage4.8 | None | SRR6045124 | Other | lineage4.9 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046442 | Other | lineage3 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046737 | Other | lineage4.9 | None |
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